Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12k19f
(629 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81453-8|CAB03798.1| 299|Caenorhabditis elegans Hypothetical pr... 100 7e-22
AL031630-23|CAA21003.1| 299|Caenorhabditis elegans Hypothetical... 100 7e-22
Z70311-11|CAA94380.1| 484|Caenorhabditis elegans Hypothetical p... 43 2e-04
Z70306-6|CAA94326.1| 484|Caenorhabditis elegans Hypothetical pr... 43 2e-04
Z83219-1|CAB05694.1| 322|Caenorhabditis elegans Hypothetical pr... 33 0.22
Z22178-1|CAA80153.1| 298|Caenorhabditis elegans Hypothetical pr... 32 0.39
Z99281-40|CAB16512.1| 268|Caenorhabditis elegans Hypothetical p... 31 0.90
Z68748-12|CAN86588.1| 792|Caenorhabditis elegans Hypothetical p... 28 6.3
Z68748-10|CAL36500.1| 789|Caenorhabditis elegans Hypothetical p... 28 6.3
Z68748-9|CAL36499.1| 796|Caenorhabditis elegans Hypothetical pr... 28 6.3
U80448-8|AAB37821.3| 1014|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z81463-4|CAB03852.2| 3118|Caenorhabditis elegans Hypothetical pr... 27 8.4
Z75547-2|CAA99909.2| 622|Caenorhabditis elegans Hypothetical pr... 27 8.4
Z75547-1|CAA99908.2| 621|Caenorhabditis elegans Hypothetical pr... 27 8.4
AC006610-1|AAK85447.4| 360|Caenorhabditis elegans Hypothetical ... 27 8.4
>Z81453-8|CAB03798.1| 299|Caenorhabditis elegans Hypothetical
protein B0250.5 protein.
Length = 299
Score = 100 bits (240), Expect = 7e-22
Identities = 60/162 (37%), Positives = 84/162 (51%), Gaps = 1/162 (0%)
Frame = +3
Query: 147 FLGLGNMGGFMAANLVKKGFTVRGYDPSKDALNAAAKNGVTPANSIXXXXXXXXXXXSIL 326
F+GLGNMGG MA NL+K G + YD +K + G A ++L
Sbjct: 6 FIGLGNMGGHMARNLIKNGKKLIVYDVNKAVVQEFKAEGCEVAAHPADIAAASKEIITVL 65
Query: 327 TSNKVVLDVYLGKDGVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEKGLGFTDAPVSGGV 506
S+ V VY G+ G+ + G+L +DSSTID V ++ A + DAP+SGGV
Sbjct: 66 PSSPHVKAVYQGEAGIFKTIQPGTLCMDSSTIDQIVSLEVAQAAALLKAEYIDAPISGGV 125
Query: 507 MGAQNATLAFMAG-GRKEDFERSLPLLKVMGAKQFHCGQIGS 629
GAQ ATL FM G G F+R+ +L +MG + G +G+
Sbjct: 126 TGAQQATLTFMVGAGNDATFKRAEAVLSLMGKNIVNLGAVGN 167
>AL031630-23|CAA21003.1| 299|Caenorhabditis elegans Hypothetical
protein B0250.5 protein.
Length = 299
Score = 100 bits (240), Expect = 7e-22
Identities = 60/162 (37%), Positives = 84/162 (51%), Gaps = 1/162 (0%)
Frame = +3
Query: 147 FLGLGNMGGFMAANLVKKGFTVRGYDPSKDALNAAAKNGVTPANSIXXXXXXXXXXXSIL 326
F+GLGNMGG MA NL+K G + YD +K + G A ++L
Sbjct: 6 FIGLGNMGGHMARNLIKNGKKLIVYDVNKAVVQEFKAEGCEVAAHPADIAAASKEIITVL 65
Query: 327 TSNKVVLDVYLGKDGVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEKGLGFTDAPVSGGV 506
S+ V VY G+ G+ + G+L +DSSTID V ++ A + DAP+SGGV
Sbjct: 66 PSSPHVKAVYQGEAGIFKTIQPGTLCMDSSTIDQIVSLEVAQAAALLKAEYIDAPISGGV 125
Query: 507 MGAQNATLAFMAG-GRKEDFERSLPLLKVMGAKQFHCGQIGS 629
GAQ ATL FM G G F+R+ +L +MG + G +G+
Sbjct: 126 TGAQQATLTFMVGAGNDATFKRAEAVLSLMGKNIVNLGAVGN 167
>Z70311-11|CAA94380.1| 484|Caenorhabditis elegans Hypothetical
protein T25B9.9 protein.
Length = 484
Score = 42.7 bits (96), Expect = 2e-04
Identities = 39/162 (24%), Positives = 68/162 (41%), Gaps = 5/162 (3%)
Frame = +3
Query: 132 DKNVAFLGLGNMGGFMAANLVKKGFTVRGYDPS----KDAL-NAAAKNGVTPANSIXXXX 296
+ ++A +GL MG + N+ GFTV ++ + D L N A + A+SI
Sbjct: 3 EADIAVIGLAVMGQNLILNMNDHGFTVCAFNRTVKLVDDFLANEAKGTKIIGAHSIEEMC 62
Query: 297 XXXXXXXSILTSNKVVLDVYLGKDGVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEKGLG 476
++ K V + D +V H ++G ++ID + + KG+
Sbjct: 63 KKLKRPRRVMMLIKAGTPVDMMIDAIVPHLEEGDIIIDGGNSEYTDSNRRSEQLAAKGIM 122
Query: 477 FTDAPVSGGVMGAQNATLAFMAGGRKEDFERSLPLLKVMGAK 602
F VSGG GA+ + M GG + + + + + AK
Sbjct: 123 FVGCGVSGGEEGARFGP-SLMPGGNPKAWPHLKDIFQKIAAK 163
>Z70306-6|CAA94326.1| 484|Caenorhabditis elegans Hypothetical
protein T25B9.9 protein.
Length = 484
Score = 42.7 bits (96), Expect = 2e-04
Identities = 39/162 (24%), Positives = 68/162 (41%), Gaps = 5/162 (3%)
Frame = +3
Query: 132 DKNVAFLGLGNMGGFMAANLVKKGFTVRGYDPS----KDAL-NAAAKNGVTPANSIXXXX 296
+ ++A +GL MG + N+ GFTV ++ + D L N A + A+SI
Sbjct: 3 EADIAVIGLAVMGQNLILNMNDHGFTVCAFNRTVKLVDDFLANEAKGTKIIGAHSIEEMC 62
Query: 297 XXXXXXXSILTSNKVVLDVYLGKDGVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEKGLG 476
++ K V + D +V H ++G ++ID + + KG+
Sbjct: 63 KKLKRPRRVMMLIKAGTPVDMMIDAIVPHLEEGDIIIDGGNSEYTDSNRRSEQLAAKGIM 122
Query: 477 FTDAPVSGGVMGAQNATLAFMAGGRKEDFERSLPLLKVMGAK 602
F VSGG GA+ + M GG + + + + + AK
Sbjct: 123 FVGCGVSGGEEGARFGP-SLMPGGNPKAWPHLKDIFQKIAAK 163
>Z83219-1|CAB05694.1| 322|Caenorhabditis elegans Hypothetical
protein C31C9.2 protein.
Length = 322
Score = 32.7 bits (71), Expect = 0.22
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = +3
Query: 135 KNVAFLGLGNMGGFMAANLVKKGFTVRGYDPSKDALNAAAKN 260
+ +A LGLG +G +A L G V G+DP A AKN
Sbjct: 146 RTLAVLGLGRIGSEVAVRLQAFGMKVIGFDPMVTKEQAEAKN 187
>Z22178-1|CAA80153.1| 298|Caenorhabditis elegans Hypothetical
protein F54C8.1 protein.
Length = 298
Score = 31.9 bits (69), Expect = 0.39
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +3
Query: 135 KNVAFLGLGNMGGFMAANLVKKGFTVRGYDPSKDALNAAAK 257
+NVA +G G MG +A GF V D +K AL+ A K
Sbjct: 12 RNVAIVGSGQMGSGIAQVTASSGFNVMLADVNKKALDRAMK 52
>Z99281-40|CAB16512.1| 268|Caenorhabditis elegans Hypothetical
protein Y57G11C.11a protein.
Length = 268
Score = 30.7 bits (66), Expect = 0.90
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 156 LGNMGGFMAANLVKKGFTVRGYDPSKDALNAA 251
+G+ GG ++ L + GF V G D +K A+ AA
Sbjct: 82 VGSGGGLLSIPLARSGFDVTGIDATKQAVEAA 113
>Z68748-12|CAN86588.1| 792|Caenorhabditis elegans Hypothetical
protein F13H10.4c protein.
Length = 792
Score = 27.9 bits (59), Expect = 6.3
Identities = 10/33 (30%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = -3
Query: 303 LHQRLQQW-SWLASLRSWPLRSVHLWKDRSREL 208
L+ RL++W W+ +S P R+ + W+ R+ +
Sbjct: 484 LYPRLEKWFHWIRITQSGPTRTTYRWRGRNETI 516
>Z68748-10|CAL36500.1| 789|Caenorhabditis elegans Hypothetical
protein F13H10.4b protein.
Length = 789
Score = 27.9 bits (59), Expect = 6.3
Identities = 10/33 (30%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = -3
Query: 303 LHQRLQQW-SWLASLRSWPLRSVHLWKDRSREL 208
L+ RL++W W+ +S P R+ + W+ R+ +
Sbjct: 481 LYPRLEKWFHWIRITQSGPTRTTYRWRGRNETI 513
>Z68748-9|CAL36499.1| 796|Caenorhabditis elegans Hypothetical
protein F13H10.4a protein.
Length = 796
Score = 27.9 bits (59), Expect = 6.3
Identities = 10/33 (30%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = -3
Query: 303 LHQRLQQW-SWLASLRSWPLRSVHLWKDRSREL 208
L+ RL++W W+ +S P R+ + W+ R+ +
Sbjct: 488 LYPRLEKWFHWIRITQSGPTRTTYRWRGRNETI 520
>U80448-8|AAB37821.3| 1014|Caenorhabditis elegans Hypothetical
protein F59A3.1 protein.
Length = 1014
Score = 27.9 bits (59), Expect = 6.3
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Frame = -1
Query: 455 YREDLFGNIRIYCTRIDQKRSFFRMSHNAIFAQVHVEHDFIAGQYG--NDHVDSINGCSN 282
Y + + G IY D K F +S+ +A+ H + + G D + ING +N
Sbjct: 261 YDDSVTGQDGIYTASADDKL-FVELSYR--YARAHTKMWKTGRRCGLSADGDNFINGITN 317
Query: 281 GVGWRH 264
G GW H
Sbjct: 318 GAGWYH 323
>Z81463-4|CAB03852.2| 3118|Caenorhabditis elegans Hypothetical protein
C06B8.7 protein.
Length = 3118
Score = 27.5 bits (58), Expect = 8.4
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -3
Query: 417 YSNRSEAILFSHEPQRHLCPGTRRARL 337
++ SEA+++ H PQ + PGT A +
Sbjct: 1469 FTRNSEAVMWLHSPQHAVVPGTPIAEI 1495
>Z75547-2|CAA99909.2| 622|Caenorhabditis elegans Hypothetical
protein R11D1.1b protein.
Length = 622
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = -1
Query: 623 DLSAVELLSSHHFEERKGPFEVF--FTTSGHEGQGSVLSTHD 504
D+ E +H+F R+GP ++F +G E +L HD
Sbjct: 491 DMMDNEADDNHYFRRRRGPLQLFVLLQRAGEEHLARMLEEHD 532
>Z75547-1|CAA99908.2| 621|Caenorhabditis elegans Hypothetical
protein R11D1.1a protein.
Length = 621
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = -1
Query: 623 DLSAVELLSSHHFEERKGPFEVF--FTTSGHEGQGSVLSTHD 504
D+ E +H+F R+GP ++F +G E +L HD
Sbjct: 490 DMMDNEADDNHYFRRRRGPLQLFVLLQRAGEEHLARMLEEHD 531
>AC006610-1|AAK85447.4| 360|Caenorhabditis elegans Hypothetical
protein C30F12.1 protein.
Length = 360
Score = 27.5 bits (58), Expect = 8.4
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = -2
Query: 565 SKSSLRPPAMKARVAF*APMTPPDTGASVNPSPFSRAI 452
S SS RP +A +P T T + NP P RA+
Sbjct: 191 SSSSHRPIRQSVSIATSSPATSSSTPSKYNPDPSLRAV 228
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,040,678
Number of Sequences: 27780
Number of extensions: 365280
Number of successful extensions: 1037
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1000
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1035
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1385109898
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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