Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12k16r
         (711 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF003140-9|AAB54171.1|   86|Caenorhabditis elegans Acyl-coenzyme...    95   3e-20
Z46794-8|CAA86779.1|  385|Caenorhabditis elegans Hypothetical pr...    73   3e-13
Z68004-6|CAA91987.2|  116|Caenorhabditis elegans Hypothetical pr...    52   4e-07
Z92826-2|CAB07319.1|  266|Caenorhabditis elegans Hypothetical pr...    50   1e-06
AL023828-1|CAA19448.1|  115|Caenorhabditis elegans Hypothetical ...    48   7e-06
Z81120-7|CAB03343.2|  274|Caenorhabditis elegans Hypothetical pr...    39   0.004
U00063-1|AAK18960.1|  146|Caenorhabditis elegans Acyl-coenzyme a...    38   0.009
U27312-8|AAZ32809.1|  219|Caenorhabditis elegans Hypothetical pr...    34   0.087
Z95559-11|CAB09005.2|  435|Caenorhabditis elegans Hypothetical p...    30   1.4  

>AF003140-9|AAB54171.1|   86|Caenorhabditis elegans Acyl-coenzyme a
           binding proteinprotein 1 protein.
          Length = 86

 Score = 95.5 bits (227), Expect = 3e-20
 Identities = 46/81 (56%), Positives = 59/81 (72%)
 Frame = -3

Query: 673 DQAAANVKNLKALPTDAQLLNLYAHFKQATVGDADPANRPGLLDLKGKAKFDAWHKLAGT 494
           D AAA VK LK  P++ +LL LYA FKQ TVGD +  ++PG+ DLKGKAK+ AW +  G 
Sbjct: 6   DDAAATVKTLKTSPSNDELLKLYALFKQGTVGD-NTTDKPGMFDLKGKAKWSAWDEKKGL 64

Query: 493 SKEDAQKAYIEIVEGLIASIG 431
           +K+DAQKAY+ +VE LIA  G
Sbjct: 65  AKDDAQKAYVALVEELIAKYG 85


>Z46794-8|CAA86779.1|  385|Caenorhabditis elegans Hypothetical
           protein R06F6.9 protein.
          Length = 385

 Score = 72.5 bits (170), Expect = 3e-13
 Identities = 34/78 (43%), Positives = 51/78 (65%)
 Frame = -3

Query: 673 DQAAANVKNLKALPTDAQLLNLYAHFKQATVGDADPANRPGLLDLKGKAKFDAWHKLAGT 494
           ++A  N+K LK  P +   L LY  FKQAT GD     RPG++D  G+AK+DAW+ L G 
Sbjct: 30  EKAQKNLKTLKEEPDNDVKLQLYGLFKQATAGDVQ-GKRPGMMDFVGRAKYDAWNTLKGQ 88

Query: 493 SKEDAQKAYIEIVEGLIA 440
           ++++A+  Y ++V GLI+
Sbjct: 89  TQDEARANYAKLVGGLIS 106


>Z68004-6|CAA91987.2|  116|Caenorhabditis elegans Hypothetical
           protein F47B10.7 protein.
          Length = 116

 Score = 52.0 bits (119), Expect = 4e-07
 Identities = 22/63 (34%), Positives = 41/63 (65%)
 Frame = -3

Query: 622 QLLNLYAHFKQATVGDADPANRPGLLDLKGKAKFDAWHKLAGTSKEDAQKAYIEIVEGLI 443
           Q L  Y+ FKQA++GD +  +RPG+  +  + K+D+W +L G S+++A++ YI+ +  + 
Sbjct: 29  QKLTFYSLFKQASIGDVN-TDRPGIFSIIERKKWDSWKELEGVSQDEAKERYIKALNDMF 87

Query: 442 ASI 434
             I
Sbjct: 88  DKI 90


>Z92826-2|CAB07319.1|  266|Caenorhabditis elegans Hypothetical
           protein C18D11.2 protein.
          Length = 266

 Score = 50.4 bits (115), Expect = 1e-06
 Identities = 27/68 (39%), Positives = 42/68 (61%)
 Frame = -3

Query: 616 LNLYAHFKQATVGDADPANRPGLLDLKGKAKFDAWHKLAGTSKEDAQKAYIEIVEGLIAS 437
           LN YA FKQAT G  D   +P   D++G  K++AW+KL   + ++A++AY++ +   I  
Sbjct: 28  LNFYALFKQATHGKCD-LPKPSFYDIQGVYKWNAWNKLDNMTMDEAKQAYVDSIVQKIRE 86

Query: 436 IGLKE*KT 413
           +  KE KT
Sbjct: 87  V-QKEYKT 93


>AL023828-1|CAA19448.1|  115|Caenorhabditis elegans Hypothetical
           protein Y17G7B.1 protein.
          Length = 115

 Score = 48.0 bits (109), Expect = 7e-06
 Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
 Frame = -3

Query: 667 AAANVKNLKALPTDAQLLNLYAHFKQATVGDA--DPANRPGLLDLKGKAKFDAWHKLAGT 494
           AA  ++ LK+ PTD + L LYA +KQA  GD   +        D  G+ K+ AW    G 
Sbjct: 18  AAEEMRRLKSEPTDRERLKLYALYKQALHGDIPNEDVYPVPAGDEVGRKKYAAWKSQKGA 77

Query: 493 SKEDAQKAYIEIVEGLIASIG 431
           + E  +  Y+ I E +I   G
Sbjct: 78  NSEKCRADYVAIAEEMIKKYG 98


>Z81120-7|CAB03343.2|  274|Caenorhabditis elegans Hypothetical
           protein T12D8.3 protein.
          Length = 274

 Score = 38.7 bits (86), Expect = 0.004
 Identities = 22/81 (27%), Positives = 34/81 (41%)
 Frame = -3

Query: 679 KIDQAAANVKNLKALPTDAQLLNLYAHFKQATVGDADPANRPGLLDLKGKAKFDAWHKLA 500
           K D A   +           +L  Y  +KQA  G AD    P   +   + KF++W   +
Sbjct: 31  KFDAATTRLPGFLTKIDQKTILKFYGLYKQAVEGPADSKKGPYWFETVARKKFNSWLANS 90

Query: 499 GTSKEDAQKAYIEIVEGLIAS 437
             S+  A +AY E++  L  S
Sbjct: 91  QMSRSRAMEAYCELMAQLDTS 111


>U00063-1|AAK18960.1|  146|Caenorhabditis elegans Acyl-coenzyme a
           binding proteinprotein 4 protein.
          Length = 146

 Score = 37.5 bits (83), Expect = 0.009
 Identities = 16/52 (30%), Positives = 31/52 (59%)
 Frame = -3

Query: 616 LNLYAHFKQATVGDADPANRPGLLDLKGKAKFDAWHKLAGTSKEDAQKAYIE 461
           L +Y+ +KQAT G  D   +P    ++ + K++AW++L    + +A+  Y+E
Sbjct: 33  LQMYSLYKQATSGKCDTI-QPYFFQIEQRMKWNAWNQLGNMDEAEAKAQYVE 83


>U27312-8|AAZ32809.1|  219|Caenorhabditis elegans Hypothetical
           protein F26A1.15 protein.
          Length = 219

 Score = 34.3 bits (75), Expect = 0.087
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = -3

Query: 541 LKGKAKFDAWHKLAGTSKEDAQKAYIEIVEGL 446
           + G  K+ AW+K  G +KE+A + Y+E V+ L
Sbjct: 157 INGNEKWHAWNKCRGLTKEEASEQYVEAVQKL 188


>Z95559-11|CAB09005.2|  435|Caenorhabditis elegans Hypothetical
           protein Y41E3.7a protein.
          Length = 435

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 15/56 (26%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
 Frame = -3

Query: 616 LNLYAHFKQATVGD-ADPANRPGLLDLKGKAKFDAWHKLAGTSKEDAQKAYIEIVE 452
           + L +  KQ   G+ +D  +  G LD+ G     AW +L   S+++A  +++ +V+
Sbjct: 51  IKLLSLSKQVQHGEISDEFDNAGWLDITGNDVNKAWRELGSLSRDEAMASFVFLVD 106


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,202,857
Number of Sequences: 27780
Number of extensions: 297779
Number of successful extensions: 639
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 622
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 635
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1655655746
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)