Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12k14r
         (731 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein pro...    24   1.7  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    24   1.7  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    23   2.2  
AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier...    23   3.0  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    22   5.2  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    21   9.0  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   9.0  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    21   9.0  

>L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein
           protein.
          Length = 74

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 12/25 (48%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
 Frame = +1

Query: 646 KLFSC-RLHYRPQRFHHLNSFRRLH 717
           K F C   H R  R HHL +  RLH
Sbjct: 8   KPFECPECHKRFTRDHHLKTHMRLH 32


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -3

Query: 69  KNTNTMERLHNVITNYLPCII 7
           +NT  +ER+HN + N L  ++
Sbjct: 354 RNTELVERMHNKLRNALQTVL 374


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 7/16 (43%), Positives = 13/16 (81%)
 Frame = +3

Query: 60  LYFLPSHDGTKSCIGS 107
           +++LP  DG ++CIG+
Sbjct: 432 MHYLPFGDGPRNCIGA 447


>AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier
           protein JHBP-1 protein.
          Length = 253

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 419 NDILCQSFKKNVVKYFR 469
           NDI C+ ++KN   Y R
Sbjct: 159 NDIYCEKYEKNGETYLR 175


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +3

Query: 57  YLYFLPSHDGTKSCIGSVDHPLYTHLAIYIYLTDIL 164
           Y  F+P   G +SC+G      Y  L + I L+ IL
Sbjct: 475 YYAFVPFSAGPRSCVGR----KYAMLKLKIVLSTIL 506


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 10/33 (30%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = -2

Query: 721 DNEDVEMSSDDENVVVDSEGGKKRVF-NTKTLK 626
           DN++V M + +     DS+  K ++F N + +K
Sbjct: 178 DNQEVSMENTENKSCTDSDIEKYKMFCNLENVK 210


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = -2

Query: 103 PMQLLVPSWLGKKYKYHGKTAQ 38
           P   L+P+++G K K+ GK+ +
Sbjct: 397 PQNSLLPNFVGYKGKHIGKSGK 418


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = +1

Query: 601 KPGTVRSDLSKFSY*KLFSCRLHYRPQRFHHLNSFRRL 714
           +P   R+DLSK  Y  L       + + +  L S+R L
Sbjct: 237 EPSANRTDLSKDDYESLVHLYTRDQSETYDVLRSWRNL 274


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,085
Number of Sequences: 438
Number of extensions: 4323
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22779405
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)