Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12k07f
         (605 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      22   3.5  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      22   3.5  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    21   6.1  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    21   6.1  

>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 111 RLVSWTDSFNSNTHYLQ 61
           R+  WTD +NSN  + Q
Sbjct: 499 RMKFWTDIYNSNPLFTQ 515


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 111 RLVSWTDSFNSNTHYLQ 61
           R+  WTD +NSN  + Q
Sbjct: 501 RMKFWTDIYNSNPLFTQ 517


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 8/33 (24%), Positives = 16/33 (48%)
 Frame = -2

Query: 319 RKHSQESRLIWHAHLQTSLPHPHPSHGLLQIFR 221
           + H+    +IW   +   L    P +GLL++ +
Sbjct: 342 KDHNMAGLMIWTVDMDDFLGLCGPKNGLLEVIK 374


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = +1

Query: 361 LIFDVELLRLE*IQFVTKNYYNIIVMSIAL*NSKSQLITL 480
           L   VE  R E I F+T+  Y+   + +AL       ITL
Sbjct: 42  LALGVERTRSELIPFLTETIYDEDEVLLALAEQLGSFITL 81


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,317
Number of Sequences: 336
Number of extensions: 3311
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15352827
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)