Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12k07f
(605 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U27353-1|AAA68610.1| 108|Caenorhabditis elegans rotamase protein. 144 4e-35
AL034393-20|CAA22330.1| 108|Caenorhabditis elegans Hypothetical... 144 4e-35
Z92832-2|CAB07371.1| 431|Caenorhabditis elegans Hypothetical pr... 112 2e-25
Z68760-1|CAA92994.1| 139|Caenorhabditis elegans Hypothetical pr... 102 2e-22
AL034393-19|CAA22328.1| 290|Caenorhabditis elegans Hypothetical... 101 3e-22
AF016430-1|AAB65370.1| 261|Caenorhabditis elegans Fk506-binding... 76 2e-14
U80445-9|AAB37799.1| 264|Caenorhabditis elegans Fk506-binding p... 68 5e-12
U80445-8|AAK68259.1| 300|Caenorhabditis elegans Fk506-binding p... 68 5e-12
Z75554-8|CAA99959.2| 259|Caenorhabditis elegans Hypothetical pr... 63 2e-10
Z73969-8|CAA98239.1| 351|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical p... 29 3.4
Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical p... 29 3.4
Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z81565-3|CAH60773.1| 489|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z81565-2|CAB04581.1| 507|Caenorhabditis elegans Hypothetical pr... 28 5.9
>U27353-1|AAA68610.1| 108|Caenorhabditis elegans rotamase protein.
Length = 108
Score = 144 bits (349), Expect = 4e-35
Identities = 67/105 (63%), Positives = 80/105 (76%)
Frame = +1
Query: 70 MGVTVETISPGDESTYPKSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRGW 249
MGV + + GD T PK+GQTV HY TL NGKK DSSRDRG PFKF+IGK EVI+GW
Sbjct: 1 MGVDRQILVEGDNVTKPKNGQTVTCHYVLTLENGKKIDSSRDRGTPFKFKIGKGEVIKGW 60
Query: 250 DEGVAKMSVGERAKLTCSPDYAYGQQGHPGVIPPNSTLIFDVELL 384
D+GVA+MSVGE++KLT S D YG +G P IP N+TL+F+VELL
Sbjct: 61 DQGVAQMSVGEKSKLTISADLGYGPRGVPPQIPANATLVFEVELL 105
>AL034393-20|CAA22330.1| 108|Caenorhabditis elegans Hypothetical
protein Y18D10A.19 protein.
Length = 108
Score = 144 bits (349), Expect = 4e-35
Identities = 67/105 (63%), Positives = 80/105 (76%)
Frame = +1
Query: 70 MGVTVETISPGDESTYPKSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRGW 249
MGV + + GD T PK+GQTV HY TL NGKK DSSRDRG PFKF+IGK EVI+GW
Sbjct: 1 MGVDRQILVEGDNVTKPKNGQTVTCHYVLTLENGKKIDSSRDRGTPFKFKIGKGEVIKGW 60
Query: 250 DEGVAKMSVGERAKLTCSPDYAYGQQGHPGVIPPNSTLIFDVELL 384
D+GVA+MSVGE++KLT S D YG +G P IP N+TL+F+VELL
Sbjct: 61 DQGVAQMSVGEKSKLTISADLGYGPRGVPPQIPANATLVFEVELL 105
>Z92832-2|CAB07371.1| 431|Caenorhabditis elegans Hypothetical
protein F31D4.3 protein.
Length = 431
Score = 112 bits (269), Expect = 2e-25
Identities = 52/88 (59%), Positives = 60/88 (68%)
Frame = +1
Query: 118 PKSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVAKMSVGERAKLT 297
P +G TV VHY GTL NG KFDSSRDRG F F +G+ VI+GWD GVA M+ GE A+ T
Sbjct: 30 PTTGTTVKVHYVGTLENGTKFDSSRDRGDQFSFNLGRGNVIKGWDLGVATMTKGEVAEFT 89
Query: 298 CSPDYAYGQQGHPGVIPPNSTLIFDVEL 381
DY YG G P IP +TLIF+VEL
Sbjct: 90 IRSDYGYGDAGSPPKIPGGATLIFEVEL 117
>Z68760-1|CAA92994.1| 139|Caenorhabditis elegans Hypothetical
protein F36H1.1 protein.
Length = 139
Score = 102 bits (244), Expect = 2e-22
Identities = 45/91 (49%), Positives = 62/91 (68%)
Frame = +1
Query: 121 KSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVAKMSVGERAKLTC 300
+ G + +HYTGTL +G +FDSSR R + F F +G+ VI+GWD+G+ M VGER LT
Sbjct: 43 RKGDQLHMHYTGTLLDGTEFDSSRTRNEEFTFTLGQGNVIKGWDQGLLNMCVGERRILTI 102
Query: 301 SPDYAYGQQGHPGVIPPNSTLIFDVELLRLE 393
P YG++G P IP NS L FDVEL++++
Sbjct: 103 PPHLGYGERGAPPKIPGNSVLKFDVELMKID 133
>AL034393-19|CAA22328.1| 290|Caenorhabditis elegans Hypothetical
protein Y18D10A.25 protein.
Length = 290
Score = 101 bits (243), Expect = 3e-22
Identities = 48/93 (51%), Positives = 63/93 (67%)
Frame = +1
Query: 70 MGVTVETISPGDESTYPKSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRGW 249
+GV + + GD T K+GQTV HY L +G K DSSRDR PFKF+IGK EVI+GW
Sbjct: 197 IGVDRQILVQGDNVTKSKNGQTVTCHYVLILVDGTKIDSSRDRETPFKFKIGKGEVIKGW 256
Query: 250 DEGVAKMSVGERAKLTCSPDYAYGQQGHPGVIP 348
D+GVA+MSV E++KLT +P + + + P IP
Sbjct: 257 DQGVAQMSVKEKSKLTIAPAFGFEKGKLPAGIP 289
Score = 57.6 bits (133), Expect = 6e-09
Identities = 34/88 (38%), Positives = 46/88 (52%)
Frame = +1
Query: 118 PKSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVAKMSVGERAKLT 297
P++GQ V + L + S+ + P F+IG EVI G D G+ KM VGE A
Sbjct: 99 PENGQLVQCYIEIKLADCYTSWSNYESQNPIIFKIGFGEVIPGLDIGIPKMKVGEIATFH 158
Query: 298 CSPDYAYGQQGHPGVIPPNSTLIFDVEL 381
S Y YG+ G G+IP N++L V L
Sbjct: 159 VSGKYGYGRAGFRGLIPRNASLTCKVRL 186
>AF016430-1|AAB65370.1| 261|Caenorhabditis elegans Fk506-binding
protein family protein3 protein.
Length = 261
Score = 76.2 bits (179), Expect = 2e-14
Identities = 37/90 (41%), Positives = 53/90 (58%)
Frame = +1
Query: 121 KSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVAKMSVGERAKLTC 300
++G T+ YT L +G DSS R +PF F++G +VI+G D + M GE+ K+
Sbjct: 164 QAGDTLHQQYTLNLEDGSFIDSSWSRNRPFIFKMGSGQVIKGMDIAMEGMCQGEKRKVVI 223
Query: 301 SPDYAYGQQGHPGVIPPNSTLIFDVELLRL 390
P+ AYG+ G P IP NS L FD+ L +L
Sbjct: 224 PPELAYGENGRPPAIPGNSYLHFDLSLEKL 253
Score = 44.8 bits (101), Expect = 5e-05
Identities = 35/106 (33%), Positives = 50/106 (47%), Gaps = 3/106 (2%)
Frame = +1
Query: 73 GVTVETISP-GDESTYPKS--GQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIR 243
GV +E I GD KS G + Y + GK S+ + KP+ F +GK EVI
Sbjct: 27 GVKIEIIKKIGDSKCKIKSESGDQLEQFYKLSDKEGKVIGSNFGQ-KPYTFTLGKGEVIH 85
Query: 244 GWDEGVAKMSVGERAKLTCSPDYAYGQQGHPGVIPPNSTLIFDVEL 381
G + + M VGE+ K+ P+ + + G V TL + VEL
Sbjct: 86 GMEIAMEGMCVGEQRKVIIPPEQGFDEDGDE-VEGKGETLYYFVEL 130
>U80445-9|AAB37799.1| 264|Caenorhabditis elegans Fk506-binding
protein family protein5, isoform a protein.
Length = 264
Score = 68.1 bits (159), Expect = 5e-12
Identities = 38/108 (35%), Positives = 53/108 (49%), Gaps = 2/108 (1%)
Frame = +1
Query: 73 GVTVETISPGDESTYPKS--GQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRG 246
G+ +E DE KS G T+ Y L +G DSS R PF F++ +EVI+G
Sbjct: 151 GIVIEQTHKIDEDKCKKSKSGDTIHQQYVLHLEDGTFVDSSFSRNAPFIFKLNNNEVIKG 210
Query: 247 WDEGVAKMSVGERAKLTCSPDYAYGQQGHPGVIPPNSTLIFDVELLRL 390
D + M GER ++ D+ YG G IP + L FD+ L +L
Sbjct: 211 MDIAMTGMCEGERRQVVIPSDFGYGDDGRAPAIPGKARLYFDITLEKL 258
Score = 42.3 bits (95), Expect = 3e-04
Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 4/110 (3%)
Frame = +1
Query: 73 GVTVETISPGDESTYP---KSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIR 243
G+ ++ I P P + G + Y + +GK+ S+ ++ KP+ F +GK +VI
Sbjct: 29 GLEIKIIRPIKAEKCPIKSQDGDVLDQWYKLSDKDGKEIGSNFNK-KPYTFTLGKGQVIP 87
Query: 244 GWDEGVAKMSVGERAKLTCSPDYAYGQQGHP-GVIPPNSTLIFDVELLRL 390
G + + M GE+ K+ + +G +G I + TL + V+L+ L
Sbjct: 88 GMERAMTGMCKGEKRKVVIPGNLGFGDKGRERDNIKEDQTLYYTVQLVDL 137
>U80445-8|AAK68259.1| 300|Caenorhabditis elegans Fk506-binding
protein family protein5, isoform b protein.
Length = 300
Score = 68.1 bits (159), Expect = 5e-12
Identities = 38/108 (35%), Positives = 53/108 (49%), Gaps = 2/108 (1%)
Frame = +1
Query: 73 GVTVETISPGDESTYPKS--GQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRG 246
G+ +E DE KS G T+ Y L +G DSS R PF F++ +EVI+G
Sbjct: 187 GIVIEQTHKIDEDKCKKSKSGDTIHQQYVLHLEDGTFVDSSFSRNAPFIFKLNNNEVIKG 246
Query: 247 WDEGVAKMSVGERAKLTCSPDYAYGQQGHPGVIPPNSTLIFDVELLRL 390
D + M GER ++ D+ YG G IP + L FD+ L +L
Sbjct: 247 MDIAMTGMCEGERRQVVIPSDFGYGDDGRAPAIPGKARLYFDITLEKL 294
Score = 42.3 bits (95), Expect = 3e-04
Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 4/110 (3%)
Frame = +1
Query: 73 GVTVETISPGDESTYP---KSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIR 243
G+ ++ I P P + G + Y + +GK+ S+ ++ KP+ F +GK +VI
Sbjct: 65 GLEIKIIRPIKAEKCPIKSQDGDVLDQWYKLSDKDGKEIGSNFNK-KPYTFTLGKGQVIP 123
Query: 244 GWDEGVAKMSVGERAKLTCSPDYAYGQQGHP-GVIPPNSTLIFDVELLRL 390
G + + M GE+ K+ + +G +G I + TL + V+L+ L
Sbjct: 124 GMERAMTGMCKGEKRKVVIPGNLGFGDKGRERDNIKEDQTLYYTVQLVDL 173
>Z75554-8|CAA99959.2| 259|Caenorhabditis elegans Hypothetical
protein ZC455.10 protein.
Length = 259
Score = 62.9 bits (146), Expect = 2e-10
Identities = 35/108 (32%), Positives = 52/108 (48%), Gaps = 2/108 (1%)
Frame = +1
Query: 73 GVTVETISP--GDESTYPKSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRG 246
G+ ++ I D+ ++G + Y L + DSS R PF FR+ EVI G
Sbjct: 146 GIQIDQIHKIEADKCKKAEAGDKIYQQYVLRLEDNTLVDSSYSRNAPFVFRLRNREVIDG 205
Query: 247 WDEGVAKMSVGERAKLTCSPDYAYGQQGHPGVIPPNSTLIFDVELLRL 390
D + M GER ++ +Y YG QG P IP + L F++ L +L
Sbjct: 206 MDIAMDGMCEGERRRVVIPSEYGYGSQGSPPEIPGGARLFFEIVLEKL 253
Score = 37.5 bits (83), Expect = 0.007
Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Frame = +1
Query: 76 VTVETISPGDESTYPKSGQTVVVHYTGTLTNGKKFDSSRDRGK-PFKFRIGKSEVIRGWD 252
+T+ + E +G VV Y LT+ K + + GK P+ F +G+++VI G D
Sbjct: 34 ITITSSIDESECEIKSAGGDVVDQYY-KLTDEKGVEIGSNFGKKPYTFTLGRNQVIPGMD 92
Query: 253 EGVAKMSVGERAKLTCSPDYAYGQ 324
+ M +GE K+ P + +
Sbjct: 93 RAMRGMCIGEIRKVVIPPKLGFAK 116
>Z73969-8|CAA98239.1| 351|Caenorhabditis elegans Hypothetical
protein C12D8.12 protein.
Length = 351
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -2
Query: 589 FTYNMKFLRIA*VYIYFHYKYT*CWY 512
F Y K L+ +IYFH KYT W+
Sbjct: 106 FVYRYKALKYGSKWIYFHGKYTFAWF 131
>Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 28.7 bits (61), Expect = 3.4
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +1
Query: 106 ESTYPKSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRI 222
EST + VHY T+G K D S G+P KFR+
Sbjct: 190 ESTTEPGWKKARVHYYRLDTDGLKADKSLILGRPPKFRV 228
>Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 28.7 bits (61), Expect = 3.4
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +1
Query: 106 ESTYPKSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRI 222
EST + VHY T+G K D S G+P KFR+
Sbjct: 205 ESTTEPGWKKARVHYYRLDTDGLKADKSLILGRPPKFRV 243
>Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical
protein F07A11.6a protein.
Length = 2211
Score = 28.7 bits (61), Expect = 3.4
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +1
Query: 106 ESTYPKSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRI 222
EST + VHY T+G K D S G+P KFR+
Sbjct: 205 ESTTEPGWKKARVHYYRLDTDGLKADKSLILGRPPKFRV 243
>Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 28.7 bits (61), Expect = 3.4
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +1
Query: 106 ESTYPKSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRI 222
EST + VHY T+G K D S G+P KFR+
Sbjct: 190 ESTTEPGWKKARVHYYRLDTDGLKADKSLILGRPPKFRV 228
>Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 28.7 bits (61), Expect = 3.4
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +1
Query: 106 ESTYPKSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRI 222
EST + VHY T+G K D S G+P KFR+
Sbjct: 205 ESTTEPGWKKARVHYYRLDTDGLKADKSLILGRPPKFRV 243
>Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical
protein F07A11.6a protein.
Length = 2211
Score = 28.7 bits (61), Expect = 3.4
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +1
Query: 106 ESTYPKSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRI 222
EST + VHY T+G K D S G+P KFR+
Sbjct: 205 ESTTEPGWKKARVHYYRLDTDGLKADKSLILGRPPKFRV 243
>Z81565-3|CAH60773.1| 489|Caenorhabditis elegans Hypothetical
protein K06G5.1b protein.
Length = 489
Score = 27.9 bits (59), Expect = 5.9
Identities = 19/67 (28%), Positives = 29/67 (43%)
Frame = +1
Query: 157 TLTNGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVAKMSVGERAKLTCSPDYAYGQQGHP 336
TL NGK D+S K F + S + + + V SP+ YG G
Sbjct: 88 TLYNGKVADNST---KITTFTVADSGTTKSYTSSTQYIYVEYTQDNATSPNAYYGSIGAG 144
Query: 337 GVIPPNS 357
G++PP++
Sbjct: 145 GLLPPST 151
>Z81565-2|CAB04581.1| 507|Caenorhabditis elegans Hypothetical
protein K06G5.1a protein.
Length = 507
Score = 27.9 bits (59), Expect = 5.9
Identities = 19/67 (28%), Positives = 29/67 (43%)
Frame = +1
Query: 157 TLTNGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVAKMSVGERAKLTCSPDYAYGQQGHP 336
TL NGK D+S K F + S + + + V SP+ YG G
Sbjct: 88 TLYNGKVADNST---KITTFTVADSGTTKSYTSSTQYIYVEYTQDNATSPNAYYGSIGAG 144
Query: 337 GVIPPNS 357
G++PP++
Sbjct: 145 GLLPPST 151
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,997,248
Number of Sequences: 27780
Number of extensions: 299215
Number of successful extensions: 726
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 726
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1300523034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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