Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12k06f
         (605 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         25   1.9  
Z22930-1|CAA80513.1|  273|Anopheles gambiae trypsin-related prot...    23   5.8  
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           23   7.7  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   7.7  
AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic acetylch...    23   7.7  
AJ697721-1|CAG26914.1|  135|Anopheles gambiae putative odorant-b...    23   7.7  

>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = -1

Query: 293  KMANGQFQDISFFQFGYILSFRL*SADHQLLEFVEAAVDASAP 165
            ++  GQFQ      FG+ L+  L     Q +   + A+DASAP
Sbjct: 1183 ELQEGQFQ-WPMLSFGWNLADVLRKTKEQKIAQAQEAIDASAP 1224


>Z22930-1|CAA80513.1|  273|Anopheles gambiae trypsin-related
           protease protein.
          Length = 273

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = -1

Query: 494 SASGCSLHFVQSVPEVGH*LSA 429
           +A G  LH V+ VP  GH  SA
Sbjct: 107 AAGGTVLHLVRIVPHPGHSSSA 128


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 23.0 bits (47), Expect = 7.7
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -3

Query: 519 WEGLLVEFQCQRLLAAFRSVCAR 451
           W G + + +C+RLL   + V AR
Sbjct: 861 WHGEVTKRECRRLLERVQRVSAR 883


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.0 bits (47), Expect = 7.7
 Identities = 14/61 (22%), Positives = 36/61 (59%)
 Frame = +3

Query: 93   EDGPQPVSRTYQYRKVMKPMLERKRRARINRCLDELKELMVSALQSEGENVAKLEKADIL 272
            E+    + R   Y++++  ++++KR+ +  R LDEL++   + L+ + ++ +    +DIL
Sbjct: 1026 EEALSMMRRDAPYKRLV--LVDKKRQKKYKRNLDELRQ--ATRLRVDAKSKSLDSCSDIL 1081

Query: 273  E 275
            +
Sbjct: 1082 Q 1082


>AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 9 protein.
          Length = 406

 Score = 23.0 bits (47), Expect = 7.7
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = +1

Query: 502 HQQALPALLSRL 537
           HQQ+LP LL RL
Sbjct: 335 HQQSLPGLLKRL 346


>AJ697721-1|CAG26914.1|  135|Anopheles gambiae putative
           odorant-binding protein OBPjj11 protein.
          Length = 135

 Score = 23.0 bits (47), Expect = 7.7
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3

Query: 339 DVDRFRAGFTHAANEVSRC 395
           DV+R R+G T  A+  +RC
Sbjct: 46  DVNRLRSGDTEGADRNTRC 64


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 591,373
Number of Sequences: 2352
Number of extensions: 11641
Number of successful extensions: 32
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58870980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)