Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12k04f
         (617 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled ...    25   2.0  
AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin bi...    25   2.0  
AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein...    25   2.0  
X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.             23   7.9  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    23   7.9  

>AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 611

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +3

Query: 384 SVLKWARVIDEFLNQYRKKGSGSGEAHG 467
           S+ K  R +DE +NQ  +KG G G   G
Sbjct: 534 SLEKDLRSLDENVNQIHQKGGGGGGGGG 561


>AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 567

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +1

Query: 511 ARSKSVMYQSMTSIPALQPTSTITNKPALASSSSS 615
           A S+SV  QS  +     P+S+ T+  +  SSSSS
Sbjct: 524 AASESVRSQSNNTTVVSTPSSSTTSSSSTTSSSSS 558


>AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 612

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +3

Query: 384 SVLKWARVIDEFLNQYRKKGSGSGEAHG 467
           S+ K  R +DE +NQ  +KG G G   G
Sbjct: 535 SLEKDLRSLDENVNQIHQKGGGGGGGGG 562


>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
          Length = 1231

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = +3

Query: 9   RSPAQRVNMADKNKVAEQYYAPPPDLGKWEAFRIF 113
           R+P     +A   +  E ++ P P  GK   ++IF
Sbjct: 210 RAPFSVQAVATSEQTVEVWWEPVPSRGKLVGYKIF 244


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 8/17 (47%), Positives = 14/17 (82%), Gaps = 1/17 (5%)
 Frame = -3

Query: 60  VQLLCSCPPCSH-AEPD 13
           +++LCSC PC H ++P+
Sbjct: 489 IEMLCSC-PCEHPSDPE 504


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 695,348
Number of Sequences: 2352
Number of extensions: 15614
Number of successful extensions: 74
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 74
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60553008
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)