Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12k03f
         (448 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118846-1|AAM50706.1|   68|Drosophila melanogaster GM14157p pro...   102   3e-22
AY070594-1|AAL48065.1|   68|Drosophila melanogaster RE69515p pro...   102   3e-22
AE014298-2903|AAF48993.1|   68|Drosophila melanogaster CG14214-P...   102   3e-22
AE013599-1411|AAF58563.1|   68|Drosophila melanogaster CG8860-PA...   102   3e-22
BT023643-1|AAY85043.1|  124|Drosophila melanogaster IP05558p pro...    61   8e-10
AE013599-3016|AAF57466.1|  105|Drosophila melanogaster CG13426-P...    61   8e-10

>AY118846-1|AAM50706.1|   68|Drosophila melanogaster GM14157p
           protein.
          Length = 68

 Score =  102 bits (244), Expect = 3e-22
 Identities = 49/68 (72%), Positives = 53/68 (77%)
 Frame = +3

Query: 93  MDQIAKFVEPGKQFAKDSIRLVRRCTKPDRKEFQKIAIATAXXXXXXXXXXXXVKLIHIP 272
           MD++ KF EPG+ FAKDSIRLV+RCTKPDRKEFQKIAIATA            VKLIHIP
Sbjct: 1   MDKVVKFAEPGRAFAKDSIRLVKRCTKPDRKEFQKIAIATAVGFAIMGFIGFFVKLIHIP 60

Query: 273 INNIIVGS 296
           INNIIVGS
Sbjct: 61  INNIIVGS 68


>AY070594-1|AAL48065.1|   68|Drosophila melanogaster RE69515p
           protein.
          Length = 68

 Score =  102 bits (244), Expect = 3e-22
 Identities = 49/68 (72%), Positives = 53/68 (77%)
 Frame = +3

Query: 93  MDQIAKFVEPGKQFAKDSIRLVRRCTKPDRKEFQKIAIATAXXXXXXXXXXXXVKLIHIP 272
           MD++ KF EPG+ FAKDSIRLV+RCTKPDRKEFQKIAIATA            VKLIHIP
Sbjct: 1   MDKVVKFAEPGRAFAKDSIRLVKRCTKPDRKEFQKIAIATAVGFCIMGFIGFFVKLIHIP 60

Query: 273 INNIIVGS 296
           INNIIVGS
Sbjct: 61  INNIIVGS 68


>AE014298-2903|AAF48993.1|   68|Drosophila melanogaster CG14214-PA
           protein.
          Length = 68

 Score =  102 bits (244), Expect = 3e-22
 Identities = 49/68 (72%), Positives = 53/68 (77%)
 Frame = +3

Query: 93  MDQIAKFVEPGKQFAKDSIRLVRRCTKPDRKEFQKIAIATAXXXXXXXXXXXXVKLIHIP 272
           MD++ KF EPG+ FAKDSIRLV+RCTKPDRKEFQKIAIATA            VKLIHIP
Sbjct: 1   MDKVVKFAEPGRAFAKDSIRLVKRCTKPDRKEFQKIAIATAVGFCIMGFIGFFVKLIHIP 60

Query: 273 INNIIVGS 296
           INNIIVGS
Sbjct: 61  INNIIVGS 68


>AE013599-1411|AAF58563.1|   68|Drosophila melanogaster CG8860-PA
           protein.
          Length = 68

 Score =  102 bits (244), Expect = 3e-22
 Identities = 49/68 (72%), Positives = 53/68 (77%)
 Frame = +3

Query: 93  MDQIAKFVEPGKQFAKDSIRLVRRCTKPDRKEFQKIAIATAXXXXXXXXXXXXVKLIHIP 272
           MD++ KF EPG+ FAKDSIRLV+RCTKPDRKEFQKIAIATA            VKLIHIP
Sbjct: 1   MDKVVKFAEPGRAFAKDSIRLVKRCTKPDRKEFQKIAIATAVGFAIMGFIGFFVKLIHIP 60

Query: 273 INNIIVGS 296
           INNIIVGS
Sbjct: 61  INNIIVGS 68


>BT023643-1|AAY85043.1|  124|Drosophila melanogaster IP05558p
           protein.
          Length = 124

 Score = 60.9 bits (141), Expect = 8e-10
 Identities = 28/57 (49%), Positives = 36/57 (63%)
 Frame = +3

Query: 120 PGKQFAKDSIRLVRRCTKPDRKEFQKIAIATAXXXXXXXXXXXXVKLIHIPINNIIV 290
           P K F K+S+R  +RCTKPDR+EFQ+I+I               VKL+HIPI NII+
Sbjct: 67  PSKDFYKNSLRFYKRCTKPDRREFQRISIGIGVGFLIMGLIGFVVKLMHIPIVNIIM 123


>AE013599-3016|AAF57466.1|  105|Drosophila melanogaster CG13426-PA
           protein.
          Length = 105

 Score = 60.9 bits (141), Expect = 8e-10
 Identities = 28/57 (49%), Positives = 36/57 (63%)
 Frame = +3

Query: 120 PGKQFAKDSIRLVRRCTKPDRKEFQKIAIATAXXXXXXXXXXXXVKLIHIPINNIIV 290
           P K F K+S+R  +RCTKPDR+EFQ+I+I               VKL+HIPI NII+
Sbjct: 48  PSKDFYKNSLRFYKRCTKPDRREFQRISIGIGVGFLIMGLIGFVVKLMHIPIVNIIM 104


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,782,544
Number of Sequences: 53049
Number of extensions: 322328
Number of successful extensions: 432
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 428
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 432
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1435027293
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)