Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12k02f
(602 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292366-1|CAL23178.2| 379|Tribolium castaneum gustatory recept... 25 0.49
AM292329-1|CAL23141.2| 379|Tribolium castaneum gustatory recept... 25 0.49
U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein. 24 1.1
U81038-1|AAB39355.1| 412|Tribolium castaneum transcription fact... 24 1.1
AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein. 24 1.1
AM292337-1|CAL23149.2| 452|Tribolium castaneum gustatory recept... 23 1.5
AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B prot... 22 4.6
AM292369-1|CAL23181.1| 408|Tribolium castaneum gustatory recept... 21 6.1
AM292364-1|CAL23176.2| 353|Tribolium castaneum gustatory recept... 21 6.1
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 21 8.0
>AM292366-1|CAL23178.2| 379|Tribolium castaneum gustatory receptor
candidate 45 protein.
Length = 379
Score = 25.0 bits (52), Expect = 0.49
Identities = 9/52 (17%), Positives = 27/52 (51%)
Frame = +1
Query: 85 ITMFLVIILFVTATFVTCEEETMKNLTTVTWAHAVNNKTYLEAALASEVAML 240
+ + + ++ V+ VTC+ T+ + T++W + + + + + +E+ L
Sbjct: 281 LCLVIYTLVSVSLVMVTCDACTIASKQTISWCYKLQEQFVTNSEVRTELFKL 332
>AM292329-1|CAL23141.2| 379|Tribolium castaneum gustatory receptor
candidate 8 protein.
Length = 379
Score = 25.0 bits (52), Expect = 0.49
Identities = 9/52 (17%), Positives = 27/52 (51%)
Frame = +1
Query: 85 ITMFLVIILFVTATFVTCEEETMKNLTTVTWAHAVNNKTYLEAALASEVAML 240
+ + + ++ V+ VTC+ T+ + T++W + + + + + +E+ L
Sbjct: 281 LCLVIYTLVSVSLVMVTCDACTIASKQTISWCYKLQEQFVTNSEVRTELFKL 332
>U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein.
Length = 283
Score = 23.8 bits (49), Expect = 1.1
Identities = 12/39 (30%), Positives = 16/39 (41%)
Frame = +1
Query: 265 LTGHDGPPIPIMAHPPATTSDLSLAEFLSTVAQYNNVNN 381
L H GPPI PP + E L+T + +N
Sbjct: 89 LHSHHGPPIHHQIRPPILHDTQPMCESLNTQPPVTSSSN 127
>U81038-1|AAB39355.1| 412|Tribolium castaneum transcription factor
Deformed protein.
Length = 412
Score = 23.8 bits (49), Expect = 1.1
Identities = 12/39 (30%), Positives = 16/39 (41%)
Frame = +1
Query: 265 LTGHDGPPIPIMAHPPATTSDLSLAEFLSTVAQYNNVNN 381
L H GPPI PP + E L+T + +N
Sbjct: 89 LHSHHGPPIHHQIRPPILHDTQPMCESLNTQPPVTSSSN 127
>AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein.
Length = 412
Score = 23.8 bits (49), Expect = 1.1
Identities = 12/39 (30%), Positives = 16/39 (41%)
Frame = +1
Query: 265 LTGHDGPPIPIMAHPPATTSDLSLAEFLSTVAQYNNVNN 381
L H GPPI PP + E L+T + +N
Sbjct: 89 LHSHHGPPIHHQIRPPILHDTQPMCESLNTQPPVTSSSN 127
>AM292337-1|CAL23149.2| 452|Tribolium castaneum gustatory receptor
candidate 16 protein.
Length = 452
Score = 23.4 bits (48), Expect = 1.5
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +1
Query: 46 IHSSLIKTKKIY*ITMFLVIILFVTATFV 132
+H +L+K K + L ++L++T TF+
Sbjct: 236 LHKNLVKVAKDHNSLYSLHLLLWITVTFI 264
>AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B
protein.
Length = 351
Score = 21.8 bits (44), Expect = 4.6
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +1
Query: 280 GPPIPIMAHPPATTSDLSLAEFLSTVA 360
G P A PPATTS S A S +
Sbjct: 26 GMTSPAAAPPPATTSSGSPASVASNAS 52
Score = 21.4 bits (43), Expect = 6.1
Identities = 10/34 (29%), Positives = 15/34 (44%)
Frame = +1
Query: 211 AALASEVAMLEADIVLGHLTGHDGPPIPIMAHPP 312
AA+ +E A D L + P+P +PP
Sbjct: 182 AAMVAETASFHHDAAGYGLRNYGPEPVPSTPYPP 215
>AM292369-1|CAL23181.1| 408|Tribolium castaneum gustatory receptor
candidate 48 protein.
Length = 408
Score = 21.4 bits (43), Expect = 6.1
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +1
Query: 67 TKKIY*ITMFLVIILFVTATFVTCEEETMKNLT 165
TKK Y + M L+ +L V MKN+T
Sbjct: 52 TKKCYFLRMVLIDLLIVGCILKHIFNILMKNVT 84
>AM292364-1|CAL23176.2| 353|Tribolium castaneum gustatory receptor
candidate 43 protein.
Length = 353
Score = 21.4 bits (43), Expect = 6.1
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = -3
Query: 123 SCDKQDYDKKHCYLIYFF 70
SC K K++CY Y F
Sbjct: 103 SCAKIKKTKRYCYYYYAF 120
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 21.0 bits (42), Expect = 8.0
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +3
Query: 519 SDNNPR*SHQIHRTRCESSSRCAMYGLD 602
S +NP S + T C S A YG D
Sbjct: 90 STSNPTYSSRSVMTSCSSVPTTASYGSD 117
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,522
Number of Sequences: 336
Number of extensions: 2960
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15248386
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -