Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12k02f
(602 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY128469-1|AAM75062.1| 300|Drosophila melanogaster RE22593p pro... 144 6e-35
AE014134-1369|AAS64653.1| 300|Drosophila melanogaster CG7231-PC... 144 6e-35
AE014134-1368|AAF52583.2| 303|Drosophila melanogaster CG7231-PA... 142 2e-34
AE014134-1367|AAF52582.2| 358|Drosophila melanogaster CG7231-PB... 142 2e-34
BT016114-1|AAV36999.1| 949|Drosophila melanogaster LD10780p pro... 30 2.8
AE013599-1182|AAF58744.1| 949|Drosophila melanogaster CG12325-P... 30 2.8
AY061125-1|AAL28673.1| 1637|Drosophila melanogaster LD10743p pro... 29 3.7
AL050231-2|CAB65850.1| 1624|Drosophila melanogaster EG:BACR37P7.... 29 3.7
AE014298-5|AAF45487.2| 1637|Drosophila melanogaster CG2995-PA pr... 29 3.7
>AY128469-1|AAM75062.1| 300|Drosophila melanogaster RE22593p
protein.
Length = 300
Score = 144 bits (350), Expect = 6e-35
Identities = 76/152 (50%), Positives = 100/152 (65%), Gaps = 4/152 (2%)
Frame = +1
Query: 157 NLTTVTWAHAVNNKTYLEAALA--SEVAMLEADIVLGHLTGHDGPPIPIMAHPPATTSDL 330
NLT +TWAHAVN++ L+ L S + +EADIVLG L G DG +PIMAHPPA SDL
Sbjct: 8 NLTAITWAHAVNSQQLLDEVLTETSGIDFIEADIVLGKLNG-DGEDMPIMAHPPANVSDL 66
Query: 331 SLAEFLSTVAQYNNVNNKQK-GVKLDFKSIEVFSKSQELIAPYSKPQVTFPLWLNADILP 507
+L+EFL+ + +N + QK GVKLDFKSIEVF S +++ T+P+W+NADIL
Sbjct: 67 TLSEFLNQIINFNRDHEDQKKGVKLDFKSIEVFEGSLDILDVNIPNPTTYPVWINADILS 126
Query: 508 GPVKAT-TTPVDPIKFIELGANHPRAVLCMGW 600
GPV+ T PVD +F + +AVL +GW
Sbjct: 127 GPVEQNRTVPVDADRFFAGCMRYKQAVLSIGW 158
>AE014134-1369|AAS64653.1| 300|Drosophila melanogaster CG7231-PC,
isoform C protein.
Length = 300
Score = 144 bits (350), Expect = 6e-35
Identities = 76/152 (50%), Positives = 100/152 (65%), Gaps = 4/152 (2%)
Frame = +1
Query: 157 NLTTVTWAHAVNNKTYLEAALA--SEVAMLEADIVLGHLTGHDGPPIPIMAHPPATTSDL 330
NLT +TWAHAVN++ L+ L S + +EADIVLG L G DG +PIMAHPPA SDL
Sbjct: 8 NLTAITWAHAVNSQQLLDEVLTETSGIDFIEADIVLGKLNG-DGEDMPIMAHPPANVSDL 66
Query: 331 SLAEFLSTVAQYNNVNNKQK-GVKLDFKSIEVFSKSQELIAPYSKPQVTFPLWLNADILP 507
+L+EFL+ + +N + QK GVKLDFKSIEVF S +++ T+P+W+NADIL
Sbjct: 67 TLSEFLNQIINFNRDHEDQKKGVKLDFKSIEVFEGSLDILDVNIPNPTTYPVWINADILS 126
Query: 508 GPVKAT-TTPVDPIKFIELGANHPRAVLCMGW 600
GPV+ T PVD +F + +AVL +GW
Sbjct: 127 GPVEQNRTVPVDADRFFAGCMRYKQAVLSIGW 158
>AE014134-1368|AAF52583.2| 303|Drosophila melanogaster CG7231-PA,
isoform A protein.
Length = 303
Score = 142 bits (345), Expect = 2e-34
Identities = 77/155 (49%), Positives = 101/155 (65%), Gaps = 7/155 (4%)
Frame = +1
Query: 157 NLTTVTWAHAVNNKTYLEAALA--SEVAMLEADIVLGHLTGHDGPPIPIMAHPPATTSDL 330
NLT +TWAHAVN++ L+ L S + +EADIVLG L G DG +PIMAHPPA SDL
Sbjct: 8 NLTAITWAHAVNSQQLLDEVLTETSGIDFIEADIVLGKLNG-DGEDMPIMAHPPANVSDL 66
Query: 331 SLAEFLSTVAQYNNVNNKQ-KGVKLDFKSIEVFSKSQELI---APYSKPQVTFPLWLNAD 498
+L+EFL+ + +N + Q KGVKLDFKSIEVF S +++ P T+P+W+NAD
Sbjct: 67 TLSEFLNQIINFNRDHEDQKKGVKLDFKSIEVFEGSLDILDVNIPNVSLPTTYPVWINAD 126
Query: 499 ILPGPVKAT-TTPVDPIKFIELGANHPRAVLCMGW 600
IL GPV+ T PVD +F + +AVL +GW
Sbjct: 127 ILSGPVEQNRTVPVDADRFFAGCMRYKQAVLSIGW 161
>AE014134-1367|AAF52582.2| 358|Drosophila melanogaster CG7231-PB,
isoform B protein.
Length = 358
Score = 142 bits (345), Expect = 2e-34
Identities = 77/155 (49%), Positives = 101/155 (65%), Gaps = 7/155 (4%)
Frame = +1
Query: 157 NLTTVTWAHAVNNKTYLEAALA--SEVAMLEADIVLGHLTGHDGPPIPIMAHPPATTSDL 330
NLT +TWAHAVN++ L+ L S + +EADIVLG L G DG +PIMAHPPA SDL
Sbjct: 63 NLTAITWAHAVNSQQLLDEVLTETSGIDFIEADIVLGKLNG-DGEDMPIMAHPPANVSDL 121
Query: 331 SLAEFLSTVAQYNNVNNKQ-KGVKLDFKSIEVFSKSQELI---APYSKPQVTFPLWLNAD 498
+L+EFL+ + +N + Q KGVKLDFKSIEVF S +++ P T+P+W+NAD
Sbjct: 122 TLSEFLNQIINFNRDHEDQKKGVKLDFKSIEVFEGSLDILDVNIPNVSLPTTYPVWINAD 181
Query: 499 ILPGPVKAT-TTPVDPIKFIELGANHPRAVLCMGW 600
IL GPV+ T PVD +F + +AVL +GW
Sbjct: 182 ILSGPVEQNRTVPVDADRFFAGCMRYKQAVLSIGW 216
>BT016114-1|AAV36999.1| 949|Drosophila melanogaster LD10780p
protein.
Length = 949
Score = 29.9 bits (64), Expect = 2.8
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Frame = +1
Query: 265 LTGHDGPPIPIMAHPPATTSDLSLAEFLSTVAQYNNVNNKQKGVKLDFKS---IEVFSKS 435
++GH+GP + I P AT+S L + TV +N + + + +D S FS S
Sbjct: 517 ISGHEGPVVSIAFSPVATSSTLVSGSWDKTVKIWNCLESNSEHETIDAVSDVTNVTFSPS 576
Query: 436 QELIA 450
E IA
Sbjct: 577 GEEIA 581
>AE013599-1182|AAF58744.1| 949|Drosophila melanogaster CG12325-PA
protein.
Length = 949
Score = 29.9 bits (64), Expect = 2.8
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Frame = +1
Query: 265 LTGHDGPPIPIMAHPPATTSDLSLAEFLSTVAQYNNVNNKQKGVKLDFKS---IEVFSKS 435
++GH+GP + I P AT+S L + TV +N + + + +D S FS S
Sbjct: 517 ISGHEGPVVSIAFSPVATSSTLVSGSWDKTVKIWNCLESNSEHETIDAVSDVTNVTFSPS 576
Query: 436 QELIA 450
E IA
Sbjct: 577 GEEIA 581
>AY061125-1|AAL28673.1| 1637|Drosophila melanogaster LD10743p protein.
Length = 1637
Score = 29.5 bits (63), Expect = 3.7
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 420 SVF*EPGADRSLQ*TSGDFPIMVKCRHS 503
+V + GAD ++Q GD P+ + CRHS
Sbjct: 1250 TVLLQSGADCNVQNVEGDTPLHIACRHS 1277
>AL050231-2|CAB65850.1| 1624|Drosophila melanogaster EG:BACR37P7.2
protein.
Length = 1624
Score = 29.5 bits (63), Expect = 3.7
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 420 SVF*EPGADRSLQ*TSGDFPIMVKCRHS 503
+V + GAD ++Q GD P+ + CRHS
Sbjct: 1237 TVLLQSGADCNVQNVEGDTPLHIACRHS 1264
>AE014298-5|AAF45487.2| 1637|Drosophila melanogaster CG2995-PA
protein.
Length = 1637
Score = 29.5 bits (63), Expect = 3.7
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 420 SVF*EPGADRSLQ*TSGDFPIMVKCRHS 503
+V + GAD ++Q GD P+ + CRHS
Sbjct: 1250 TVLLQSGADCNVQNVEGDTPLHIACRHS 1277
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,219,727
Number of Sequences: 53049
Number of extensions: 513298
Number of successful extensions: 1422
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1367
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1404
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2462276481
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -