Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12j22f
         (588 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058269-1|AAL13498.1|  185|Drosophila melanogaster GH02075p pro...   170   1e-42
AE014134-125|AAF51482.1|  185|Drosophila melanogaster CG2789-PA ...   170   1e-42
AE013599-1694|AAF58382.1|  506|Drosophila melanogaster CG17050-P...    33   0.38 
AY070971-1|AAL48593.1|  141|Drosophila melanogaster RE06996p pro...    29   3.5  
AE013599-3602|AAM68251.1|  141|Drosophila melanogaster CG30411-P...    29   3.5  
AE014134-387|AAF51270.2|  146|Drosophila melanogaster CG16995-PA...    29   4.7  

>AY058269-1|AAL13498.1|  185|Drosophila melanogaster GH02075p
           protein.
          Length = 185

 Score =  170 bits (413), Expect = 1e-42
 Identities = 82/158 (51%), Positives = 103/158 (65%), Gaps = 1/158 (0%)
 Frame = +3

Query: 111 GSIILPNVGGWANGLFFAGQIRKDNSEKSWYDELKKPSWTPPKWVFGPAWTVLYSSMGYA 290
           G++ILPN+GG  NG      ++      SWY  LK PS+ PP  VF P W  LY+ MGY 
Sbjct: 15  GAVILPNLGGIYNGRLTRQHLQ------SWYANLKFPSFKPPNSVFAPMWISLYAGMGYG 68

Query: 291 SYLIWEECDGFT-EDAVLPLTLYGVQLLLNWSWTPIFFGLKDFKLAFIEISVLSGAAVAT 467
           SYL+W +  GF  E A LPL  YG QL LNW+WTPIFFG  + K   I+I  L+ AA A 
Sbjct: 69  SYLVWRDGGGFAGEAAKLPLIAYGTQLALNWAWTPIFFGQHNIKGGLIDIVALTAAASAC 128

Query: 468 TLSFGSVNKTAGLLLIPYLAWLGYASSLSYYIWKNNPK 581
            + F  VNKTAGLL +PY+AWLG+A++L+Y IWK NP+
Sbjct: 129 GVLFYRVNKTAGLLFVPYVAWLGFATALNYAIWKLNPE 166


>AE014134-125|AAF51482.1|  185|Drosophila melanogaster CG2789-PA
           protein.
          Length = 185

 Score =  170 bits (413), Expect = 1e-42
 Identities = 82/158 (51%), Positives = 103/158 (65%), Gaps = 1/158 (0%)
 Frame = +3

Query: 111 GSIILPNVGGWANGLFFAGQIRKDNSEKSWYDELKKPSWTPPKWVFGPAWTVLYSSMGYA 290
           G++ILPN+GG  NG      ++      SWY  LK PS+ PP  VF P W  LY+ MGY 
Sbjct: 15  GAVILPNLGGIYNGRLTRQHLQ------SWYANLKFPSFKPPNSVFAPMWISLYAGMGYG 68

Query: 291 SYLIWEECDGFT-EDAVLPLTLYGVQLLLNWSWTPIFFGLKDFKLAFIEISVLSGAAVAT 467
           SYL+W +  GF  E A LPL  YG QL LNW+WTPIFFG  + K   I+I  L+ AA A 
Sbjct: 69  SYLVWRDGGGFAGEAAKLPLIAYGTQLALNWAWTPIFFGQHNIKGGLIDIVALTAAASAC 128

Query: 468 TLSFGSVNKTAGLLLIPYLAWLGYASSLSYYIWKNNPK 581
            + F  VNKTAGLL +PY+AWLG+A++L+Y IWK NP+
Sbjct: 129 GVLFYRVNKTAGLLFVPYVAWLGFATALNYAIWKLNPE 166


>AE013599-1694|AAF58382.1|  506|Drosophila melanogaster CG17050-PA
           protein.
          Length = 506

 Score = 32.7 bits (71), Expect = 0.38
 Identities = 14/60 (23%), Positives = 30/60 (50%)
 Frame = -3

Query: 481 PNDSVVATAAPDSTEISMNASLKSFNPKKIGVQDQLSSSCTPYNVRGRTASSVKPSHSSQ 302
           P D+++     +S +      ++ F  +    + ++S+   P+ +RG   S + PSHSS+
Sbjct: 166 PRDNMLNVLETESMKAKQKKEVEKFMERNWWSRKRVSTRLIPFGMRGIRTSKIDPSHSSR 225


>AY070971-1|AAL48593.1|  141|Drosophila melanogaster RE06996p
           protein.
          Length = 141

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
 Frame = +3

Query: 378 WSWTPIFFGLKDFKLAFIEI--SVLSGAAV---ATTLSFGSVNKTAGLL 509
           W W P  FG+   +L ++ +   +L G  +   A ++++G VNK A +L
Sbjct: 8   WEWLPAMFGMFPMRLVWLVVLLCLLPGQVLLGNAASVTWGHVNKYASVL 56


>AE013599-3602|AAM68251.1|  141|Drosophila melanogaster CG30411-PA
           protein.
          Length = 141

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
 Frame = +3

Query: 378 WSWTPIFFGLKDFKLAFIEI--SVLSGAAV---ATTLSFGSVNKTAGLL 509
           W W P  FG+   +L ++ +   +L G  +   A ++++G VNK A +L
Sbjct: 8   WEWLPAMFGMFPMRLVWLVVLLCLLPGQVLLGNAASVTWGHVNKYASVL 56


>AE014134-387|AAF51270.2|  146|Drosophila melanogaster CG16995-PA
           protein.
          Length = 146

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 9/37 (24%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
 Frame = +3

Query: 138 GWANGLFFA--GQIRKDNSEKSWYDELKKPSWTPPKW 242
           G+   ++ A  G ++  ++ +SWY+E+++ +W  P +
Sbjct: 56  GYGENIYMASGGNLKGADAVRSWYEEIRQYNWNSPSF 92


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,559,696
Number of Sequences: 53049
Number of extensions: 671892
Number of successful extensions: 1866
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1784
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1862
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2358819486
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)