Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12j18f
         (606 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    24   0.86 
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    21   6.1  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    21   6.1  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   8.1  

>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 24.2 bits (50), Expect = 0.86
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = +2

Query: 449 PPMYDFPFPSADMLKRLPHITASQTNKSIAISKLQ 553
           PP YD+  P   +L  L  I       ++ +S+L+
Sbjct: 440 PPTYDYGIPQGVVLNPLDAICNKPRKDAVCVSQLR 474


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +2

Query: 467 PFPSADMLKRLPHITASQTNKSIA 538
           P+   D+L+   HI  +QTN +IA
Sbjct: 301 PYIVFDLLQVYGHIPKTQTNIAIA 324


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = -3

Query: 244 QHGLSFNDPFXQHNSSNSICCLRQLSRLW 158
           Q G+  N PF +HN      C+   +R++
Sbjct: 127 QSGIFINLPFLEHNLIRLKNCVIYFNRIF 155


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -3

Query: 247 IQHGLSFNDPF 215
           I+H LSFND F
Sbjct: 188 IRHSLSFNDCF 198


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,059
Number of Sequences: 336
Number of extensions: 2467
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15352827
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)