Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12j16r
         (393 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-2809|AAF49405.1|   78|Drosophila melanogaster CG9669-PA...    58   5e-09
BT011105-1|AAR82771.1|   74|Drosophila melanogaster LP09435p pro...    56   1e-08
BT012475-1|AAS93746.1|  670|Drosophila melanogaster RE15795p pro...    28   3.8  
AY122183-1|AAM52695.1| 1380|Drosophila melanogaster LD40412p pro...    28   3.8  
AE014297-4410|AAF56915.1| 1380|Drosophila melanogaster CG1911-PA...    28   3.8  
AY069329-1|AAL39474.1|  656|Drosophila melanogaster LD04718p pro...    28   5.1  
AE013599-2817|AAX52695.1|  656|Drosophila melanogaster CG15117-P...    28   5.1  
AE013599-2816|AAM68434.1|  670|Drosophila melanogaster CG15117-P...    28   5.1  
AE013599-2815|AAF57602.2|  656|Drosophila melanogaster CG15117-P...    28   5.1  
AE014297-3882|AAF56535.1|  296|Drosophila melanogaster CG14546-P...    27   6.7  
AE013599-3384|AAF46837.1|  775|Drosophila melanogaster CG10955-P...    27   6.7  
AE013599-13|EAA46165.2|  308|Drosophila melanogaster CG40130-PA ...    27   6.7  

>AE014296-2809|AAF49405.1|   78|Drosophila melanogaster CG9669-PA
           protein.
          Length = 78

 Score = 57.6 bits (133), Expect = 5e-09
 Identities = 34/79 (43%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
 Frame = -3

Query: 304 IESMIRYTSPINPAVFPHXXXXXXXXXXXXTAWFFVYEVTSTKASRD--MFKELLLSLVA 131
           ++ M RY SP+NPAVFPH            TAWFF++ V S K+S++  + KELL+SL A
Sbjct: 1   MDVMQRYVSPVNPAVFPHLATVLLVIGTFFTAWFFIF-VVSRKSSKESTLIKELLISLCA 59

Query: 130 AXXXXXXXXXXXLWVGIYV 74
           +           L VGIYV
Sbjct: 60  SIFLGFGIVFLLLTVGIYV 78


>BT011105-1|AAR82771.1|   74|Drosophila melanogaster LP09435p
           protein.
          Length = 74

 Score = 56.4 bits (130), Expect = 1e-08
 Identities = 33/74 (44%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
 Frame = -3

Query: 289 RYTSPINPAVFPHXXXXXXXXXXXXTAWFFVYEVTSTKASRD--MFKELLLSLVAAXXXX 116
           RY SP+NPAVFPH            TAWFF++ V S K+S++  + KELL+SL A+    
Sbjct: 2   RYVSPVNPAVFPHLATVLLVIGTFFTAWFFIF-VVSRKSSKESTLIKELLISLCASIFLG 60

Query: 115 XXXXXXXLWVGIYV 74
                  L VGIYV
Sbjct: 61  FGIVFLLLTVGIYV 74


>BT012475-1|AAS93746.1|  670|Drosophila melanogaster RE15795p
           protein.
          Length = 670

 Score = 28.3 bits (60), Expect = 3.8
 Identities = 16/43 (37%), Positives = 24/43 (55%)
 Frame = -2

Query: 392 IPQSLSLSSFIGFVFYSVSF*NSHKNESRN*INDPVHVANKPG 264
           +  +LS  + IG VFYSVS   S  NE+ N +    ++ +K G
Sbjct: 245 VTTNLSKDATIGEVFYSVSVNGSAANEADNVLQIQANLYDKDG 287


>AY122183-1|AAM52695.1| 1380|Drosophila melanogaster LD40412p protein.
          Length = 1380

 Score = 28.3 bits (60), Expect = 3.8
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +3

Query: 93   SNKNKIPKPENKAATNDKSNSLNISLE 173
            SN NK+ KPE KA   +  N LN  L+
Sbjct: 1288 SNTNKLAKPELKAVVTEFENRLNECLQ 1314


>AE014297-4410|AAF56915.1| 1380|Drosophila melanogaster CG1911-PA
            protein.
          Length = 1380

 Score = 28.3 bits (60), Expect = 3.8
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +3

Query: 93   SNKNKIPKPENKAATNDKSNSLNISLE 173
            SN NK+ KPE KA   +  N LN  L+
Sbjct: 1288 SNTNKLAKPELKAVVTEFENRLNECLQ 1314


>AY069329-1|AAL39474.1|  656|Drosophila melanogaster LD04718p
           protein.
          Length = 656

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = -2

Query: 392 IPQSLSLSSFIGFVFYSVSF*NSHKNESRN*INDPVHVANKPG 264
           +  +LS  + +G VFYSVS   S  NE+ N +    ++ +K G
Sbjct: 231 VTTNLSKDATVGEVFYSVSVNGSAANEADNVLQIQANLYDKDG 273


>AE013599-2817|AAX52695.1|  656|Drosophila melanogaster CG15117-PC,
           isoform C protein.
          Length = 656

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = -2

Query: 392 IPQSLSLSSFIGFVFYSVSF*NSHKNESRN*INDPVHVANKPG 264
           +  +LS  + +G VFYSVS   S  NE+ N +    ++ +K G
Sbjct: 231 VTTNLSKDATVGEVFYSVSVNGSAANEADNVLQIQANLYDKDG 273


>AE013599-2816|AAM68434.1|  670|Drosophila melanogaster CG15117-PB,
           isoform B protein.
          Length = 670

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = -2

Query: 392 IPQSLSLSSFIGFVFYSVSF*NSHKNESRN*INDPVHVANKPG 264
           +  +LS  + +G VFYSVS   S  NE+ N +    ++ +K G
Sbjct: 245 VTTNLSKDATVGEVFYSVSVNGSAANEADNVLQIQANLYDKDG 287


>AE013599-2815|AAF57602.2|  656|Drosophila melanogaster CG15117-PA,
           isoform A protein.
          Length = 656

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = -2

Query: 392 IPQSLSLSSFIGFVFYSVSF*NSHKNESRN*INDPVHVANKPG 264
           +  +LS  + +G VFYSVS   S  NE+ N +    ++ +K G
Sbjct: 231 VTTNLSKDATVGEVFYSVSVNGSAANEADNVLQIQANLYDKDG 273


>AE014297-3882|AAF56535.1|  296|Drosophila melanogaster CG14546-PA
           protein.
          Length = 296

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 17/56 (30%), Positives = 28/56 (50%)
 Frame = +3

Query: 84  PTHSNKNKIPKPENKAATNDKSNSLNISLEALVLVTS*TKNQAVKNIPIPSNKKVR 251
           PT  N+N+     +K + +  S S N   + +V + + T    V+N PIP  K +R
Sbjct: 236 PTRFNQNQ---HASKVSRSSSSRSSNHRQDNIVCLPAMTYPPYVRNCPIPRQKLIR 288


>AE013599-3384|AAF46837.1|  775|Drosophila melanogaster CG10955-PA
           protein.
          Length = 775

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +3

Query: 81  IPTHSNKNKIPKPENKAATNDKSNSLNI 164
           +P   N N +PKP +K A      SLN+
Sbjct: 738 VPLPVNTNSVPKPASKPAETVSKRSLNL 765


>AE013599-13|EAA46165.2|  308|Drosophila melanogaster CG40130-PA
           protein.
          Length = 308

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = -1

Query: 201 SFTKLQVLKPQEICSKSYFYHWWPPYFLVSEFYSC 97
           S+  L +L    + S S F +W  P++  S F+ C
Sbjct: 59  SYRSLLLLGTTALYSSSTFVYWGSPFYYRSNFFFC 93


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,930,335
Number of Sequences: 53049
Number of extensions: 304022
Number of successful extensions: 679
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 665
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 677
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1107890535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)