Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12j12f
         (603 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D5727C Cluster: PREDICTED: hypothetical protein;...    38   0.14 
UniRef50_Q6CIX5 Cluster: Similarities with sgd|S0002286 Saccharo...    33   5.2  
UniRef50_A2E821 Cluster: B-box zinc finger family protein; n=1; ...    33   6.9  
UniRef50_UPI0000F1E389 Cluster: PREDICTED: similar to erythrocyt...    32   9.1  

>UniRef50_UPI0000D5727C Cluster: PREDICTED: hypothetical protein;
           n=1; Tribolium castaneum|Rep: PREDICTED: hypothetical
           protein - Tribolium castaneum
          Length = 275

 Score = 38.3 bits (85), Expect = 0.14
 Identities = 31/149 (20%), Positives = 62/149 (41%)
 Frame = +1

Query: 154 KQVKNELQREFNFIKGIFSVMPVSILTKGADEDADYEIYTGSKNENEEKDLPKRARSIAX 333
           ++V+  L+ E  FI  +FS++ +     G++++++ +  T  K   ++ +   RA+S++ 
Sbjct: 6   RKVEAILKTENKFISDLFSILSLPSHNTGSEDESE-QAETSHKKPFKKSE-KTRAKSLSE 63

Query: 334 XXXXXXXXXSQQKHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDKSLLEDENNQIE 513
                    S++K                                   + LL  +     
Sbjct: 64  LQDRLHAITSKKK-------LTYKDKLAKKSLKNRMKKKTKQDERNAQQKLLRAQKFVKP 116

Query: 514 QKHKISAPKPVFNTDAKLVFSKFNFDNFG 600
           +   +   KPVFN++ K+VFSKF+F N G
Sbjct: 117 EGDSVKPAKPVFNSEGKMVFSKFDFSNLG 145


>UniRef50_Q6CIX5 Cluster: Similarities with sgd|S0002286
           Saccharomyces cerevisiae YDL128w VCX1 Ca2+-transport;
           n=1; Kluyveromyces lactis|Rep: Similarities with
           sgd|S0002286 Saccharomyces cerevisiae YDL128w VCX1
           Ca2+-transport - Kluyveromyces lactis (Yeast) (Candida
           sphaerica)
          Length = 538

 Score = 33.1 bits (72), Expect = 5.2
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = +1

Query: 244 DEDADYEIYTGSKNENEEKDLPKR 315
           D D+D+E   G K ++EEKDLP +
Sbjct: 363 DSDSDFEFSVGDKKDDEEKDLPPK 386


>UniRef50_A2E821 Cluster: B-box zinc finger family protein; n=1;
           Trichomonas vaginalis G3|Rep: B-box zinc finger family
           protein - Trichomonas vaginalis G3
          Length = 663

 Score = 32.7 bits (71), Expect = 6.9
 Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
 Frame = +1

Query: 163 KNELQREFNFIKG-IFSVMPVSILTKGADEDADYEIYTGSKNENEEKDLPKRARSIA 330
           KNEL+R+ N +KG I    P+ +L    D+    E+YT    EN  KDLP +   IA
Sbjct: 360 KNELERQKNLVKGAIDEGEPLYVLQTVKDD----ELYTNFVKEN--KDLPLKIEGIA 410


>UniRef50_UPI0000F1E389 Cluster: PREDICTED: similar to erythrocyte
            membrane-associated giant protein antigen 332; n=2; Danio
            rerio|Rep: PREDICTED: similar to erythrocyte
            membrane-associated giant protein antigen 332 - Danio
            rerio
          Length = 3018

 Score = 32.3 bits (70), Expect = 9.1
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +1

Query: 493  DENNQIEQKHKISAPKPVFNTDAKLVFSKFNFDN 594
            DEN+ ++ K+KIS   P+F+ D +    +F F N
Sbjct: 1133 DENDTVDSKYKISVETPIFSLDDQPNPDEFTFQN 1166


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 378,058,748
Number of Sequences: 1657284
Number of extensions: 5381586
Number of successful extensions: 15423
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 14995
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15420
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 42732687689
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)