Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12j04f
         (623 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A5E683 Cluster: Putative uncharacterized protein; n=1; ...    37   0.34 
UniRef50_Q00Y84 Cluster: Homology to unknown gene; n=2; Ostreoco...    36   0.79 
UniRef50_A6W8J3 Cluster: Putative uncharacterized protein; n=1; ...    34   2.4  
UniRef50_UPI000023F4CE Cluster: hypothetical protein FG10649.1; ...    32   9.7  
UniRef50_Q8I2Y8 Cluster: Putative uncharacterized protein PFI080...    32   9.7  
UniRef50_Q5BXA9 Cluster: SJCHGC06441 protein; n=1; Schistosoma j...    32   9.7  
UniRef50_Q8NEL8 Cluster: PRKD3 protein; n=12; Eumetazoa|Rep: PRK...    32   9.7  

>UniRef50_A5E683 Cluster: Putative uncharacterized protein; n=1;
           Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
           uncharacterized protein - Lodderomyces elongisporus
           (Yeast) (Saccharomyces elongisporus)
          Length = 2219

 Score = 37.1 bits (82), Expect = 0.34
 Identities = 35/124 (28%), Positives = 55/124 (44%)
 Frame = -2

Query: 394 NSDILIPILNIILMFNYLYKNLQSTIPFLKLIKDHAKNSNIDKNITLIAL*I*PF*ELLN 215
           NSD    + +++ M +        TI  L L    + NSNIDK++ L +         +N
Sbjct: 626 NSDPFKDLSSLVFMKDVNLIEFAKTISDLDLKYFSSWNSNIDKSLLLASS--------IN 677

Query: 214 TILIL*YTKTKNYMFFSKIFPLFINTKHFSYIYRVIANHFIPANLKSRDFFFS*QELHAQ 35
           T       +TKN  F+ K   +F N KH  Y+ R++ NH       +R   F+  E  A+
Sbjct: 678 TT-----KETKN-QFYKKNPLIFNNNKHIHYLSRLLINHIFVEQALARSMSFAILESKAR 731

Query: 34  RVRK 23
            + K
Sbjct: 732 ILEK 735


>UniRef50_Q00Y84 Cluster: Homology to unknown gene; n=2;
           Ostreococcus|Rep: Homology to unknown gene -
           Ostreococcus tauri
          Length = 371

 Score = 35.9 bits (79), Expect = 0.79
 Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 5/92 (5%)
 Frame = -1

Query: 605 SSRLALFPCGPRTSIATSPRSR-ADEAAAINSSVASRSIVREFTIAT----TARTEKIRA 441
           S+RLAL P  P  SIA  PR+R    A+A    V    +V E  I T    T  T     
Sbjct: 3   STRLALAPTAPARSIAPHPRARVVRSASASTEHVLPDGVVLERVIGTPASSTTTTGAPLV 62

Query: 440 HMAGIAMSAKMLQSRKFRYFNSNTQYNINVQL 345
            + G   +A   +    RYFN+  +  ++V L
Sbjct: 63  FVHGSYHAAWCYEEYFARYFNARGRATVSVSL 94


>UniRef50_A6W8J3 Cluster: Putative uncharacterized protein; n=1;
           Kineococcus radiotolerans SRS30216|Rep: Putative
           uncharacterized protein - Kineococcus radiotolerans
           SRS30216
          Length = 717

 Score = 34.3 bits (75), Expect = 2.4
 Identities = 18/45 (40%), Positives = 23/45 (51%)
 Frame = -1

Query: 566 SIATSPRSRADEAAAINSSVASRSIVREFTIATTARTEKIRAHMA 432
           S+AT  R RADE  A N+  A R ++R F    T      RA+ A
Sbjct: 177 SVATDRRQRADEVGAANADEAHRRLLRGFAARATVALAPHRANAA 221


>UniRef50_UPI000023F4CE Cluster: hypothetical protein FG10649.1;
           n=1; Gibberella zeae PH-1|Rep: hypothetical protein
           FG10649.1 - Gibberella zeae PH-1
          Length = 289

 Score = 32.3 bits (70), Expect = 9.7
 Identities = 15/41 (36%), Positives = 24/41 (58%)
 Frame = -1

Query: 584 PCGPRTSIATSPRSRADEAAAINSSVASRSIVREFTIATTA 462
           PC P+TSI  SP + A+ + +I+S+  S +     T AT +
Sbjct: 22  PCKPQTSIFVSPATNAETSGSIDSTAQSSTATAGETSATAS 62


>UniRef50_Q8I2Y8 Cluster: Putative uncharacterized protein PFI0805w;
            n=1; Plasmodium falciparum 3D7|Rep: Putative
            uncharacterized protein PFI0805w - Plasmodium falciparum
            (isolate 3D7)
          Length = 2506

 Score = 32.3 bits (70), Expect = 9.7
 Identities = 16/38 (42%), Positives = 22/38 (57%)
 Frame = -2

Query: 373  ILNIILMFNYLYKNLQSTIPFLKLIKDHAKNSNIDKNI 260
            IL  I  FNYLY N Q+   F K  +  + N+++DK I
Sbjct: 1736 ILFFISFFNYLYTNEQNIFSFQKKHEHISNNNSLDKTI 1773


>UniRef50_Q5BXA9 Cluster: SJCHGC06441 protein; n=1; Schistosoma
           japonicum|Rep: SJCHGC06441 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 237

 Score = 32.3 bits (70), Expect = 9.7
 Identities = 18/64 (28%), Positives = 31/64 (48%)
 Frame = -1

Query: 479 TIATTARTEKIRAHMAGIAMSAKMLQSRKFRYFNSNTQYNINVQLLI*EFTIHYSIFEIN 300
           T++ + +T    AH++ I  +A +L       F + +  NIN + ++ E  IH    EIN
Sbjct: 20  TVSESCKTNSTEAHLSDILQNAPLLDDCVQPEFATLSTVNINAEKILDESVIHEINEEIN 79

Query: 299 KRPR 288
              R
Sbjct: 80  ANER 83


>UniRef50_Q8NEL8 Cluster: PRKD3 protein; n=12; Eumetazoa|Rep: PRKD3
           protein - Homo sapiens (Human)
          Length = 611

 Score = 32.3 bits (70), Expect = 9.7
 Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
 Frame = -1

Query: 617 AWSNSSRLALFPCGPRTSIATSP-RSRADEAAAINSSVASRSIVREFTIATTAR---TEK 450
           +W  + R AL P  P+ S+ TSP R +  +  + + SV++  I     I+T  +    E 
Sbjct: 522 SWEKAIRQALMPVTPQASVCTSPGRGKDHKDLSTSISVSNCQIQENVDISTVYQIFADEV 581

Query: 449 IRAHMAGIAMSAKMLQ 402
           + +   GI    K LQ
Sbjct: 582 LGSGQFGIVYGGKQLQ 597


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 518,143,006
Number of Sequences: 1657284
Number of extensions: 9067627
Number of successful extensions: 30030
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 28770
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29981
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 45636850930
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)