Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12j04f
         (623 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119024-1|AAM50884.1|  701|Drosophila melanogaster LP05023p pro...    29   6.8  
AF145630-1|AAD38605.1|  550|Drosophila melanogaster BcDNA.GH0574...    29   6.8  
AE014298-2655|AAF48792.1| 4081|Drosophila melanogaster CG7092-PA...    29   6.8  
AE014297-1244|AAF54592.1|  550|Drosophila melanogaster CG4757-PA...    29   6.8  

>AY119024-1|AAM50884.1|  701|Drosophila melanogaster LP05023p
           protein.
          Length = 701

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
 Frame = -1

Query: 569 TSIATSPRSRADEAAAINSSVASRSIVR-EFTIATTARTEKI 447
           T +   PRS ADE  A+ + +A ++I R +  +AT  + E I
Sbjct: 379 TLLLGQPRSAADEGQAMENEIAQQTIARIQKALATKIKREPI 420


>AF145630-1|AAD38605.1|  550|Drosophila melanogaster BcDNA.GH05741
           protein.
          Length = 550

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 12/39 (30%), Positives = 23/39 (58%)
 Frame = +3

Query: 198 YNINIVFKSS*KGQIYKAISVIFLSMFEFLAWSFINFKN 314
           Y I   FK++ +G  +K   +  ++ FEFL+ +F + +N
Sbjct: 305 YLIESPFKTARRGDFHKVALITGITEFEFLSGAFFDLRN 343


>AE014298-2655|AAF48792.1| 4081|Drosophila melanogaster CG7092-PA
            protein.
          Length = 4081

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
 Frame = -1

Query: 569  TSIATSPRSRADEAAAINSSVASRSIVR-EFTIATTARTEKI 447
            T +   PRS ADE  A+ + +A ++I R +  +AT  + E I
Sbjct: 3759 TLLLGQPRSAADEGQAMENEIAQQTIARIQKALATKIKREPI 3800


>AE014297-1244|AAF54592.1|  550|Drosophila melanogaster CG4757-PA
           protein.
          Length = 550

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 12/39 (30%), Positives = 23/39 (58%)
 Frame = +3

Query: 198 YNINIVFKSS*KGQIYKAISVIFLSMFEFLAWSFINFKN 314
           Y I   FK++ +G  +K   +  ++ FEFL+ +F + +N
Sbjct: 305 YLIESPFKTARRGDFHKVALITGITEFEFLSGAFFDLRN 343


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,781,025
Number of Sequences: 53049
Number of extensions: 404588
Number of successful extensions: 1888
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1567
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1882
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2579793750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)