Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12i21r
         (727 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003530-1|AAO39534.1|  674|Drosophila melanogaster RE12147p pro...    31   1.6  
AE014298-1633|AAF48053.2|  784|Drosophila melanogaster CG32666-P...    31   1.6  
AE014298-1632|AAS65317.1|  784|Drosophila melanogaster CG32666-P...    31   1.6  
AJ000387-3|CAA04050.1| 1217|Drosophila melanogaster reverse tran...    29   4.9  
AF156228-1|AAD43808.1|  157|Drosophila melanogaster salivary gla...    29   8.5  
AE014134-808|AAF50957.4| 1286|Drosophila melanogaster CG3047-PA ...    29   8.5  

>BT003530-1|AAO39534.1|  674|Drosophila melanogaster RE12147p
           protein.
          Length = 674

 Score = 31.1 bits (67), Expect = 1.6
 Identities = 14/46 (30%), Positives = 23/46 (50%)
 Frame = +3

Query: 318 NSFLLQSRQIIIPTSNSTSTVKANVTKATLTRRPCPTTQIGIRKNI 455
           N  + +  QI+ PT  ++ + K N   AT  ++P  T Q+G    I
Sbjct: 418 NGHVHKPTQIVTPTRRASDSDKENTYTATFVKKPVATIQLGSSNGI 463


>AE014298-1633|AAF48053.2|  784|Drosophila melanogaster CG32666-PB,
           isoform B protein.
          Length = 784

 Score = 31.1 bits (67), Expect = 1.6
 Identities = 14/46 (30%), Positives = 23/46 (50%)
 Frame = +3

Query: 318 NSFLLQSRQIIIPTSNSTSTVKANVTKATLTRRPCPTTQIGIRKNI 455
           N  + +  QI+ PT  ++ + K N   AT  ++P  T Q+G    I
Sbjct: 418 NGHVHKPTQIVTPTRRASDSDKENTYTATFVKKPVATIQLGSSNGI 463


>AE014298-1632|AAS65317.1|  784|Drosophila melanogaster CG32666-PA,
           isoform A protein.
          Length = 784

 Score = 31.1 bits (67), Expect = 1.6
 Identities = 14/46 (30%), Positives = 23/46 (50%)
 Frame = +3

Query: 318 NSFLLQSRQIIIPTSNSTSTVKANVTKATLTRRPCPTTQIGIRKNI 455
           N  + +  QI+ PT  ++ + K N   AT  ++P  T Q+G    I
Sbjct: 418 NGHVHKPTQIVTPTRRASDSDKENTYTATFVKKPVATIQLGSSNGI 463


>AJ000387-3|CAA04050.1| 1217|Drosophila melanogaster reverse
           transcriptase protein.
          Length = 1217

 Score = 29.5 bits (63), Expect = 4.9
 Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 6/60 (10%)
 Frame = +3

Query: 273 NFLQP----IRMELRMVHYNSFLLQSR--QIIIPTSNSTSTVKANVTKATLTRRPCPTTQ 434
           NF +P    IR  L+++ YN  ++  +  Q +I  + S +    N  + TLT +PCPT++
Sbjct: 697 NFKEPNSKIIRWRLQLMEYNFEIIHKKGSQNVIADALSRADPNLNYNE-TLTVKPCPTSE 755


>AF156228-1|AAD43808.1|  157|Drosophila melanogaster salivary gland
           secretion protein protein.
          Length = 157

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = +3

Query: 369 TSTVKANVTKATLTRRPCP 425
           T+T  A+ T+ T TRRPCP
Sbjct: 32  TTTPSASPTRTTTTRRPCP 50


>AE014134-808|AAF50957.4| 1286|Drosophila melanogaster CG3047-PA
            protein.
          Length = 1286

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = +3

Query: 369  TSTVKANVTKATLTRRPCP 425
            T+T  A+ T+ T TRRPCP
Sbjct: 1161 TTTPSASPTRTTTTRRPCP 1179


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,361,557
Number of Sequences: 53049
Number of extensions: 531705
Number of successful extensions: 972
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 938
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 971
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3252477558
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)