Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12i21f
         (603 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock p...    50   8e-08
AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeot...    26   1.1  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    25   2.5  
DQ139954-1|ABA29475.1|  451|Anopheles gambiae protein O-fucosylt...    24   4.4  
DQ974170-1|ABJ52810.1|  511|Anopheles gambiae serpin 12 protein.       23   5.8  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    23   5.8  
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    23   7.6  

>AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock
           protein protein.
          Length = 133

 Score = 49.6 bits (113), Expect = 8e-08
 Identities = 24/51 (47%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
 Frame = +2

Query: 413 KLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKS-VYREYNREFCCPR 562
           ++  DV Q++PEEI VK VDN +LV  KHEEK D    V R + R +  P+
Sbjct: 16  QINLDVQQFSPEEISVKYVDNCVLVEGKHEEKQDDHGYVSRHFVRRYMLPK 66



 Score = 23.0 bits (47), Expect = 7.6
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = +1

Query: 550 LLPKGTNPEAIKSSLSRD 603
           +LPKG N   I SSLS D
Sbjct: 63  MLPKGHNEADIVSSLSSD 80


>AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeotic
           protein protein.
          Length = 308

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = +1

Query: 193 HQRALRCRNEEDGRRNEQIQIRTHEQRKQQFLQEH 297
           +++A R R E+D  +NE ++       ++Q  QEH
Sbjct: 204 NEQARREREEQDKMKNESLKSAQQHHSQKQAQQEH 238


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = +2

Query: 182 EFSSIRERFDAEMRKMEEEMSKFRSELMNRESN 280
           E    R  +   +++ E+E++ FR+EL   E+N
Sbjct: 678 EMQKKRSEYSQLIQEHEKELADFRAELKQTEAN 710


>DQ139954-1|ABA29475.1|  451|Anopheles gambiae protein
           O-fucosyltransferase 2 protein.
          Length = 451

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -1

Query: 570 ICSLGQQNSLLYSLYTDFVSDFSSCL 493
           +C  G   +L Y  Y +F +D  +CL
Sbjct: 180 VCPKGHDGALAYFGYGNFTADAFTCL 205


>DQ974170-1|ABJ52810.1|  511|Anopheles gambiae serpin 12 protein.
          Length = 511

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = +2

Query: 380 LIQDEGDGKTLKLRFDVSQY-TPEEIVVKTVDNKL 481
           +I +  +G+TLK  +DV ++ T  ++V K  D  L
Sbjct: 1   MISEGAEGQTLKELYDVFKFPTDRDLVRKAFDVSL 35


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 11/38 (28%), Positives = 22/38 (57%)
 Frame = +1

Query: 187  LKHQRALRCRNEEDGRRNEQIQIRTHEQRKQQFLQEHN 300
            L+HQ   + + ++  ++ +Q Q   H+Q +Q  LQ H+
Sbjct: 1300 LQHQYQQQLQQQQQQQQQQQQQ---HQQHQQHQLQHHH 1334


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
           anion exchanger protein.
          Length = 1102

 Score = 23.0 bits (47), Expect = 7.6
 Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = -1

Query: 552 QNSLLY-SLYTDFVSDFSSCLAWTSNLLSTVLTTISS 445
           +N+L + ++   F+SDFS  +A  S  L  V T I++
Sbjct: 746 KNALFFPAVVRQFISDFSVTIAIFSMTLLDVFTRIAT 782


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 546,843
Number of Sequences: 2352
Number of extensions: 9803
Number of successful extensions: 84
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 82
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 83
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58450473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)