Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12i10f
         (659 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075278-1|AAL68145.1|  204|Drosophila melanogaster AT30094p pro...   185   5e-47
AE014134-1795|AAN10729.1|  204|Drosophila melanogaster CG31717-P...   185   5e-47
BT024276-1|ABC86338.1|  141|Drosophila melanogaster IP14648p pro...    29   5.6  
AY089585-1|AAL90323.1|  588|Drosophila melanogaster RE12138p pro...    29   7.4  
AL121806-4|CAB65881.1|  588|Drosophila melanogaster EG:BACR42I17...    29   7.4  
AE014298-155|AAF45587.1|  588|Drosophila melanogaster CG11384-PA...    29   7.4  
AE014297-888|AAF54344.1|  316|Drosophila melanogaster CG16733-PA...    29   7.4  
AY166585-1|AAN86032.1|  990|Drosophila melanogaster HAMLET protein.    28   9.8  
AE014134-2973|AAF53703.3| 1108|Drosophila melanogaster CG31753-P...    28   9.8  

>AY075278-1|AAL68145.1|  204|Drosophila melanogaster AT30094p
           protein.
          Length = 204

 Score =  185 bits (450), Expect = 5e-47
 Identities = 88/197 (44%), Positives = 119/197 (60%)
 Frame = +3

Query: 63  RQTPPMLKKILQYDVQITKTFVDRALKITALKSLRNHSQLLEISCHGIVWLAGWLTFIWL 242
           R + P LK +L+ DVQ++K FV     ++  KSLR HS+ LEISC GI W   W+ FIWL
Sbjct: 2   RTSSPALKYLLEKDVQVSKHFVVAVSNLSFFKSLRIHSRFLEISCDGIAWFVSWIAFIWL 61

Query: 243 FNSKDLYQLQVNMXXXXXXXXXXXXXXXXFVRRRRPVPMNKLMEVGPDKFSFPSGHASRA 422
            +SK LYQ+QVNM                 VRRRRPV    ++ +GPDKFSFPSGHASRA
Sbjct: 62  LSSKSLYQMQVNMLFGLILDVVIVAVLKALVRRRRPVASKDMLTIGPDKFSFPSGHASRA 121

Query: 423 VLISFILIYFDSVSIIFYPPLMAWVVSVSISRVLAERHYLLDSXXXXXXXXLEGLFMSLI 602
             +         + IIF  P+ AW VSV+ISR++ +RHY+LD         LE L + L+
Sbjct: 122 FFVLLFFAKLYPLHIIFLMPVTAWAVSVAISRLILQRHYILDICAGAAIGVLEALIVGLL 181

Query: 603 WLSQSTSASILXSLSDE 653
           W+S+ T+ SI+  +++E
Sbjct: 182 WISEETAFSIVGFVTEE 198


>AE014134-1795|AAN10729.1|  204|Drosophila melanogaster CG31717-PA
           protein.
          Length = 204

 Score =  185 bits (450), Expect = 5e-47
 Identities = 88/197 (44%), Positives = 119/197 (60%)
 Frame = +3

Query: 63  RQTPPMLKKILQYDVQITKTFVDRALKITALKSLRNHSQLLEISCHGIVWLAGWLTFIWL 242
           R + P LK +L+ DVQ++K FV     ++  KSLR HS+ LEISC GI W   W+ FIWL
Sbjct: 2   RTSSPALKYLLEKDVQVSKHFVVAVSNLSFFKSLRIHSRFLEISCDGIAWFVSWIAFIWL 61

Query: 243 FNSKDLYQLQVNMXXXXXXXXXXXXXXXXFVRRRRPVPMNKLMEVGPDKFSFPSGHASRA 422
            +SK LYQ+QVNM                 VRRRRPV    ++ +GPDKFSFPSGHASRA
Sbjct: 62  LSSKSLYQMQVNMLFGLILDVVIVAVLKALVRRRRPVASKDMLTIGPDKFSFPSGHASRA 121

Query: 423 VLISFILIYFDSVSIIFYPPLMAWVVSVSISRVLAERHYLLDSXXXXXXXXLEGLFMSLI 602
             +         + IIF  P+ AW VSV+ISR++ +RHY+LD         LE L + L+
Sbjct: 122 FFVLLFFAKLYPLHIIFLMPVTAWAVSVAISRLILQRHYILDICAGAAIGVLEALIVGLL 181

Query: 603 WLSQSTSASILXSLSDE 653
           W+S+ T+ SI+  +++E
Sbjct: 182 WISEETAFSIVGFVTEE 198


>BT024276-1|ABC86338.1|  141|Drosophila melanogaster IP14648p
           protein.
          Length = 141

 Score = 29.1 bits (62), Expect = 5.6
 Identities = 14/40 (35%), Positives = 27/40 (67%)
 Frame = +3

Query: 405 GHASRAVLISFILIYFDSVSIIFYPPLMAWVVSVSISRVL 524
           GHA+RA+++  I+I    V+I+    L+A +V+  ++R+L
Sbjct: 16  GHAARAIVLIVIIILLVVVAILRIIVLVAVIVATILARLL 55


>AY089585-1|AAL90323.1|  588|Drosophila melanogaster RE12138p
           protein.
          Length = 588

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = -3

Query: 567 YPHLLCCPVDSDVQP 523
           YPHLL CPV S++ P
Sbjct: 197 YPHLLSCPVPSELPP 211


>AL121806-4|CAB65881.1|  588|Drosophila melanogaster EG:BACR42I17.3
           protein.
          Length = 588

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = -3

Query: 567 YPHLLCCPVDSDVQP 523
           YPHLL CPV S++ P
Sbjct: 197 YPHLLSCPVPSELPP 211


>AE014298-155|AAF45587.1|  588|Drosophila melanogaster CG11384-PA
           protein.
          Length = 588

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = -3

Query: 567 YPHLLCCPVDSDVQP 523
           YPHLL CPV S++ P
Sbjct: 197 YPHLLSCPVPSELPP 211


>AE014297-888|AAF54344.1|  316|Drosophila melanogaster CG16733-PA
           protein.
          Length = 316

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 7/71 (9%)
 Frame = +3

Query: 360 NKLMEVGPDKFSFPSGHASRAVLISFILIYFDSVSIIFYPPL-------MAWVVSVSISR 518
           N  +EV PD+F  P  +      I  + +Y D V ++ YP         M W++   +  
Sbjct: 24  NCFVEVLPDQFIIPRKYVELGESIRSLPVYQDDVWMVSYPRTGSTWAQEMVWLLGHQLDY 83

Query: 519 VLAERHYLLDS 551
           V AE+   L S
Sbjct: 84  VAAEQDLRLRS 94


>AY166585-1|AAN86032.1|  990|Drosophila melanogaster HAMLET protein.
          Length = 990

 Score = 28.3 bits (60), Expect = 9.8
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = +2

Query: 146 NCSKVFTEPFSITRDIMSWH 205
           NCSKVF +P ++ R I ++H
Sbjct: 284 NCSKVFCDPSNLQRHIRAYH 303


>AE014134-2973|AAF53703.3| 1108|Drosophila melanogaster CG31753-PA
           protein.
          Length = 1108

 Score = 28.3 bits (60), Expect = 9.8
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = +2

Query: 146 NCSKVFTEPFSITRDIMSWH 205
           NCSKVF +P ++ R I ++H
Sbjct: 402 NCSKVFCDPSNLQRHIRAYH 421


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,644,578
Number of Sequences: 53049
Number of extensions: 633506
Number of successful extensions: 1399
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1349
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1397
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2827453950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)