Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12i09f
(622 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 29 0.028
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 26 0.26
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 24 1.0
AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly pro... 24 1.0
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 23 2.4
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 22 4.2
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 22 4.2
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 22 4.2
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 22 4.2
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 22 4.2
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 22 5.5
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 22 5.5
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 22 5.5
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 21 7.3
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 21 7.3
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 21 7.3
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 21 7.3
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 21 7.3
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 21 9.7
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 21 9.7
DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 21 9.7
AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone este... 21 9.7
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 21 9.7
AY526235-1|AAS20468.1| 169|Apis mellifera esterase protein. 21 9.7
AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein. 21 9.7
AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin prot... 21 9.7
AB073997-1|BAC76401.1| 124|Apis mellifera preprotachykinin prot... 21 9.7
AB073996-1|BAC76400.1| 215|Apis mellifera preprotachykinin prot... 21 9.7
AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin prot... 21 9.7
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 29.5 bits (63), Expect = 0.028
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +1
Query: 253 EPALELRLTSDGCKDENNVEHSKNNNTVKQNNILNEKTNN 372
EP + L++ + NN +++ NNN NN N NN
Sbjct: 311 EPKIISSLSNKTIHNNNNYKYNYNNNNYNNNNYNNNYNNN 350
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 26.2 bits (55), Expect = 0.26
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Frame = +1
Query: 421 RIRWPDLVVQVSLHLVSIYGIFLIVTNEVKLLTTLFALATIYTSGFGITAGVH--RLWSH 594
RI+W L V ++ + G+F + N +K T + + T T G H R+W+H
Sbjct: 129 RIQWSKLQVFDCRYVTTTSGMFEALCNHIKYSTNKGNIRSAITIFPQRTDGKHDYRVWNH 188
Query: 595 R 597
+
Sbjct: 189 Q 189
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 24.2 bits (50), Expect = 1.0
Identities = 14/51 (27%), Positives = 17/51 (33%)
Frame = +1
Query: 220 QQNIEVCTEVMEPALELRLTSDGCKDENNVEHSKNNNTVKQNNILNEKTNN 372
Q E CTE A+ L + + N N NN N NN
Sbjct: 200 QPEDEECTEATAGAVVLETCQRNSNNSTITAGNANTNASNNNNNNNNNNNN 250
Score = 23.8 bits (49), Expect = 1.4
Identities = 11/38 (28%), Positives = 18/38 (47%)
Frame = +1
Query: 277 TSDGCKDENNVEHSKNNNTVKQNNILNEKTNNETDFDI 390
T+ + NN ++ NNN N N +NN + D+
Sbjct: 235 TNASNNNNNNNNNNNNNNGANDNGNGNGASNNNNNGDM 272
>AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly
protein MRJP2 protein.
Length = 452
Score = 24.2 bits (50), Expect = 1.0
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +1
Query: 280 SDGCKDENNVEHSKNNNTVKQNNILNEKTNNETD 381
+D ++ NN + N K N N+K NN+ D
Sbjct: 420 NDNIQNTNNQNDNNQKNNKKNAN--NQKNNNQND 451
Score = 22.6 bits (46), Expect = 3.2
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = +1
Query: 289 CKDENNVEHSKNNNTVKQNNILNEKTN 369
C + N ++ +N N NN N K N
Sbjct: 414 CVNNNQNDNIQNTNNQNDNNQKNNKKN 440
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.0 bits (47), Expect = 2.4
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = +1
Query: 253 EPALELRLTSDGCKDENNVEHSKNNNTVKQNNILNEK 363
EP + L++ + NN +++ NN NN N+K
Sbjct: 78 EPKIISSLSNKTIHNNNNYKYNYNNKYNYNNNNYNKK 114
Score = 21.4 bits (43), Expect = 7.3
Identities = 9/34 (26%), Positives = 17/34 (50%)
Frame = +1
Query: 298 ENNVEHSKNNNTVKQNNILNEKTNNETDFDISKY 399
E + S +N T+ NN NN+ +++ + Y
Sbjct: 78 EPKIISSLSNKTIHNNNNYKYNYNNKYNYNNNNY 111
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.2 bits (45), Expect = 4.2
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = +1
Query: 253 EPALELRLTSDGCKDENNVEHSKNNNTVKQN 345
EP + L++ + NN +++ NNN N
Sbjct: 78 EPKIISSLSNKTIHNNNNYKYNYNNNNYNNN 108
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.2 bits (45), Expect = 4.2
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = +1
Query: 253 EPALELRLTSDGCKDENNVEHSKNNNTVKQN 345
EP + L++ + NN +++ NNN N
Sbjct: 78 EPKIISSLSNKTIHNNNNYKYNYNNNNYNNN 108
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.2 bits (45), Expect = 4.2
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = +1
Query: 253 EPALELRLTSDGCKDENNVEHSKNNNTVKQN 345
EP + L++ + NN +++ NNN N
Sbjct: 78 EPKIISSLSNKTIHNNNNYKYNYNNNNYNNN 108
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 22.2 bits (45), Expect = 4.2
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +2
Query: 566 PRVYIDCGHIELIRRERLY 622
P YID + +IRR LY
Sbjct: 215 PEPYIDITFVVIIRRRTLY 233
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 22.2 bits (45), Expect = 4.2
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +1
Query: 352 LNEKTNNETDFDISKYEAMEFTP 420
L+EK D D+ KYE + TP
Sbjct: 299 LDEKLERN-DLDLEKYEGISSTP 320
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 21.8 bits (44), Expect = 5.5
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = +1
Query: 253 EPALELRLTSDGCKDENNVEHSKNNNTVKQN 345
EP + L++ + NN +++ NNN N
Sbjct: 78 EPKIISSLSNRTIHNNNNYKYNYNNNNYNNN 108
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.8 bits (44), Expect = 5.5
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -2
Query: 327 VIFGVLHIIFVFTSIR 280
VIFGVL ++F F R
Sbjct: 17 VIFGVLFVLFSFLRTR 32
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.8 bits (44), Expect = 5.5
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -2
Query: 327 VIFGVLHIIFVFTSIR 280
VIFGVL ++F F R
Sbjct: 17 VIFGVLFVLFSFLRTR 32
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.4 bits (43), Expect = 7.3
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = -1
Query: 259 QVPLLLCKLQCSVAPEPW*CNVKFV 185
QV L ++ S+ PW C KF+
Sbjct: 909 QVTLNARLVELSLGSNPWSCRCKFL 933
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 21.4 bits (43), Expect = 7.3
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = -3
Query: 344 FCLTVLLFLEC 312
FCL L+F EC
Sbjct: 453 FCLLFLMFFEC 463
Score = 21.0 bits (42), Expect = 9.7
Identities = 10/33 (30%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Frame = -2
Query: 402 FIFADVKVCFVIGFLV*YIILFDCVVI---FGV 313
++F + V GF + +++ F+C+ I FGV
Sbjct: 440 YVFQLLDSYAVSGFCLLFLMFFECIAISWAFGV 472
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 21.4 bits (43), Expect = 7.3
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = -3
Query: 344 FCLTVLLFLEC 312
FCL L+F EC
Sbjct: 506 FCLLFLMFFEC 516
Score = 21.0 bits (42), Expect = 9.7
Identities = 10/33 (30%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Frame = -2
Query: 402 FIFADVKVCFVIGFLV*YIILFDCVVI---FGV 313
++F + V GF + +++ F+C+ I FGV
Sbjct: 493 YVFQLLDSYAVSGFCLLFLMFFECIAISWAFGV 525
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 21.4 bits (43), Expect = 7.3
Identities = 8/28 (28%), Positives = 15/28 (53%)
Frame = +1
Query: 220 QQNIEVCTEVMEPALELRLTSDGCKDEN 303
Q+N+++C+E+ E T C +N
Sbjct: 650 QENVQLCSEISESYSSNNKTLCKCDAQN 677
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 21.4 bits (43), Expect = 7.3
Identities = 9/42 (21%), Positives = 21/42 (50%)
Frame = +1
Query: 286 GCKDENNVEHSKNNNTVKQNNILNEKTNNETDFDISKYEAME 411
GC +V N KQN+ + +++++ + + Y++ E
Sbjct: 927 GCSSLVDVSTPVNKKVYKQNDYIVDESSSSSFYSSFLYKSSE 968
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.0 bits (42), Expect = 9.7
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +1
Query: 301 NNVEHSKNNNTVKQNN 348
NN +++ NNN NN
Sbjct: 92 NNYKYNYNNNNYNNNN 107
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.0 bits (42), Expect = 9.7
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +1
Query: 301 NNVEHSKNNNTVKQNN 348
NN +++ NNN NN
Sbjct: 92 NNYKYNYNNNNYNNNN 107
>DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.0 bits (42), Expect = 9.7
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = +1
Query: 253 EPALELRLTSDGCKDENNVEHSKNNNTVK 339
EP + L++ + NN +++ NNN K
Sbjct: 78 EPKIISSLSNKTIHNNNNYKYNYNNNCKK 106
>AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone
esterase protein.
Length = 567
Score = 21.0 bits (42), Expect = 9.7
Identities = 7/23 (30%), Positives = 13/23 (56%)
Frame = +1
Query: 184 KQILRCITMAPAQQNIEVCTEVM 252
K+++RC+ PA+ +E M
Sbjct: 267 KEMIRCLRYRPARAIVETLANFM 289
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 21.0 bits (42), Expect = 9.7
Identities = 9/24 (37%), Positives = 11/24 (45%)
Frame = +1
Query: 301 NNVEHSKNNNTVKQNNILNEKTNN 372
NN ++ NN NN N NN
Sbjct: 325 NNNNYNNNNYNNNYNNYNNNNYNN 348
>AY526235-1|AAS20468.1| 169|Apis mellifera esterase protein.
Length = 169
Score = 21.0 bits (42), Expect = 9.7
Identities = 7/23 (30%), Positives = 13/23 (56%)
Frame = +1
Query: 184 KQILRCITMAPAQQNIEVCTEVM 252
K+++RC+ PA+ +E M
Sbjct: 138 KEMIRCLRYRPARAIVETLANFM 160
>AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein.
Length = 567
Score = 21.0 bits (42), Expect = 9.7
Identities = 7/23 (30%), Positives = 13/23 (56%)
Frame = +1
Query: 184 KQILRCITMAPAQQNIEVCTEVM 252
K+++RC+ PA+ +E M
Sbjct: 267 KEMIRCLRYRPARAIVETLANFM 289
>AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin
protein.
Length = 339
Score = 21.0 bits (42), Expect = 9.7
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +1
Query: 337 KQNNILNEKTNNETDFDISKYEAMEF 414
K+N+I+N+ N DI+K M F
Sbjct: 67 KKNSIINDVKNELFPEDINKRAPMGF 92
>AB073997-1|BAC76401.1| 124|Apis mellifera preprotachykinin
protein.
Length = 124
Score = 21.0 bits (42), Expect = 9.7
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +1
Query: 337 KQNNILNEKTNNETDFDISKYEAMEF 414
K+N+I+N+ N DI+K M F
Sbjct: 68 KKNSIINDVKNELFPEDINKRAPMGF 93
>AB073996-1|BAC76400.1| 215|Apis mellifera preprotachykinin
protein.
Length = 215
Score = 21.0 bits (42), Expect = 9.7
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +1
Query: 337 KQNNILNEKTNNETDFDISKYEAMEF 414
K+N+I+N+ N DI+K M F
Sbjct: 67 KKNSIINDVKNELFPEDINKRAPMGF 92
>AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin
protein.
Length = 301
Score = 21.0 bits (42), Expect = 9.7
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +1
Query: 337 KQNNILNEKTNNETDFDISKYEAMEF 414
K+N+I+N+ N DI+K M F
Sbjct: 67 KKNSIINDVKNELFPEDINKRAPMGF 92
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,729
Number of Sequences: 438
Number of extensions: 4374
Number of successful extensions: 45
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18460203
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -