Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12i02f
         (607 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L76433-1|AAC27659.1|  392|Anopheles gambiae tryptophan oxygenase...    26   1.1  
L76432-1|AAC27663.1|  392|Anopheles gambiae tryptophan oxygenase...    26   1.1  
DQ007318-1|AAY24700.1|  153|Anopheles gambiae lysozyme c-4 protein.    25   1.4  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    24   3.3  
CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    24   4.4  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    24   4.4  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    24   4.4  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   7.7  

>L76433-1|AAC27659.1|  392|Anopheles gambiae tryptophan oxygenase
           protein.
          Length = 392

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = +1

Query: 79  STLFICLENS-GVKDMHQIK*NLKYQDV 159
           S  F  LEN  GVK  H++K N KY +V
Sbjct: 139 SLQFRLLENKLGVKSEHRVKYNQKYTEV 166


>L76432-1|AAC27663.1|  392|Anopheles gambiae tryptophan oxygenase
           protein.
          Length = 392

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = +1

Query: 79  STLFICLENS-GVKDMHQIK*NLKYQDV 159
           S  F  LEN  GVK  H++K N KY +V
Sbjct: 139 SLQFRLLENKLGVKSEHRVKYNQKYTEV 166


>DQ007318-1|AAY24700.1|  153|Anopheles gambiae lysozyme c-4 protein.
          Length = 153

 Score = 25.4 bits (53), Expect = 1.4
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +3

Query: 399 SGYGVGKNKASQWCQGGRK*RSCIRK 476
           + YG+ +  +  WC+ GRK   C +K
Sbjct: 80  ANYGIFQINSKTWCREGRKGGHCDKK 105


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +1

Query: 355  QEGFSRSKGTVSDNVQDMALGKTRPVSGVKVGGNSEAVSGK 477
            Q+G   SK TVS +  D    + +  SG + GG S A + K
Sbjct: 1006 QKGRILSKATVSTSESDSDDSRLKIASGDESGGESGAPATK 1046


>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
           protein.
          Length = 1087

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
 Frame = +2

Query: 308 LTGDRYQWIY-LWKKTHKRDFLGLRVLLATMFRIWR 412
           L  DRY ++   +  THK   LG RV +   FR+ R
Sbjct: 474 LEADRYNFVTECFFMTHKAIDLGYRVCIEKFFRMNR 509


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +1

Query: 331 DLPLEEDAQEGFSRSKGTVS 390
           D P   DAQ GF R + T+S
Sbjct: 594 DSPQLSDAQYGFRRGRSTIS 613


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +1

Query: 331 DLPLEEDAQEGFSRSKGTVS 390
           D P   DAQ GF R + T+S
Sbjct: 538 DSPQLSDAQYGFRRGRSTIS 557


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.0 bits (47), Expect = 7.7
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +1

Query: 226  ADNSWTGMASTRLSDHDERCCDAGSL 303
            A  S +G A+TR+ D   R C  G L
Sbjct: 992  AAGSSSGTATTRIPDSITRSCSVGYL 1017


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 618,478
Number of Sequences: 2352
Number of extensions: 13099
Number of successful extensions: 21
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58870980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)