Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12h24r
         (673 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC006224-1|AAH06224.1|  194|Homo sapiens MGC11257 protein protein.     78   2e-14
AF495721-1|AAQ06675.1|  194|Homo sapiens unknown protein.              78   2e-14
BC130449-1|AAI30450.1| 1253|Homo sapiens PPP1R9A protein protein.      33   0.93 
BC032435-1|AAH32435.1|  716|Homo sapiens RABEP1 protein protein.       33   0.93 
AK128197-1|BAC87320.1|  161|Homo sapiens protein ( Homo sapiens ...    31   5.0  
BC113387-1|AAI13388.1|  248|Homo sapiens family with sequence si...    30   8.7  
BC113385-1|AAI13386.1|  248|Homo sapiens family with sequence si...    30   8.7  
AL009173-2|CAI42611.1|  248|Homo sapiens novel protein protein.        30   8.7  
AK094978-1|BAC04467.1|  248|Homo sapiens protein ( Homo sapiens ...    30   8.7  

>BC006224-1|AAH06224.1|  194|Homo sapiens MGC11257 protein protein.
          Length = 194

 Score = 78.2 bits (184), Expect = 2e-14
 Identities = 47/139 (33%), Positives = 73/139 (52%)
 Frame = -1

Query: 598 SKPAAVKRQHVDDSDAEETPRXXXXXKPVITETTDKKGKKSIRQTKRENYLKRQAQAAEL 419
           SK  AV R  +D ++ E +P        V+     K+ KK  RQ  RE  L  Q   A  
Sbjct: 42  SKGEAVLRPGLD-AEPELSPEEQR----VLERKLKKERKKEERQRLREAGLVAQHPPARR 96

Query: 418 SKNQLKSQCLSYLSQWKHDKQNWKFMKVKQLWLLKNKFSTNLVPDESWQTLIEYFESAKG 239
           S  +L    L YL +W    +NW+F K +Q WLL + + ++ VPDE + TL+ Y E  +G
Sbjct: 97  SGAEL---ALDYLCRWAQKHKNWRFQKTRQTWLLLHMYDSDKVPDEHFSTLLAYLEGLQG 153

Query: 238 NVRTLLLEDAKKVIKQMDE 182
             R L ++ A+ +++++DE
Sbjct: 154 RARELTVQKAEALMRELDE 172


>AF495721-1|AAQ06675.1|  194|Homo sapiens unknown protein.
          Length = 194

 Score = 78.2 bits (184), Expect = 2e-14
 Identities = 47/139 (33%), Positives = 73/139 (52%)
 Frame = -1

Query: 598 SKPAAVKRQHVDDSDAEETPRXXXXXKPVITETTDKKGKKSIRQTKRENYLKRQAQAAEL 419
           SK  AV R  +D ++ E +P        V+     K+ KK  RQ  RE  L  Q   A  
Sbjct: 42  SKGEAVLRPGLD-AEPELSPEEQR----VLERKLKKERKKEERQRLREAGLVAQHPPARR 96

Query: 418 SKNQLKSQCLSYLSQWKHDKQNWKFMKVKQLWLLKNKFSTNLVPDESWQTLIEYFESAKG 239
           S  +L    L YL +W    +NW+F K +Q WLL + + ++ VPDE + TL+ Y E  +G
Sbjct: 97  SGAEL---ALDYLCRWAQKHKNWRFQKTRQTWLLLHMYDSDKVPDEHFSTLLAYLEGLQG 153

Query: 238 NVRTLLLEDAKKVIKQMDE 182
             R L ++ A+ +++++DE
Sbjct: 154 RARELTVQKAEALMRELDE 172


>BC130449-1|AAI30450.1| 1253|Homo sapiens PPP1R9A protein protein.
          Length = 1253

 Score = 33.1 bits (72), Expect = 0.93
 Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
 Frame = -2

Query: 615  RTMKLNRNLRQLSDNTL-MTPMQKKHRVKRKRKSPLLPKQLIKKVKSRYDKQREKTILNV 439
            +T  L+++L   SD  L MT  Q +  VK+K K   +  +  +K + + +KQREK     
Sbjct: 1169 KTPGLSQSLALSSDEALGMTASQDRAVVKKKLKEMKMSLEKARKAQEKMEKQREKLRRKE 1228

Query: 438  KPKLQNFQK 412
            + ++Q   K
Sbjct: 1229 QEQMQRKSK 1237


>BC032435-1|AAH32435.1|  716|Homo sapiens RABEP1 protein protein.
          Length = 716

 Score = 33.1 bits (72), Expect = 0.93
 Identities = 25/111 (22%), Positives = 56/111 (50%), Gaps = 3/111 (2%)
 Frame = -1

Query: 484 KKSIRQTKRENYLKRQAQAAELSKNQLKSQCLSYLSQWK--HDKQNWKFMKVKQLWLLKN 311
           ++ + + + E  L+ + + A+    +L+S  +    +     DK      K+K+L   K 
Sbjct: 158 RRRLSEGQEEENLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELEASKV 217

Query: 310 K-FSTNLVPDESWQTLIEYFESAKGNVRTLLLEDAKKVIKQMDEWTEKHGQ 161
           K  +  L  ++S +T +E + +     +++L EDA+K+ K++ E  ++H Q
Sbjct: 218 KELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAEKLRKELHEERQQHNQ 268


>AK128197-1|BAC87320.1|  161|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46325 fis, clone TESTI4043371. ).
          Length = 161

 Score = 30.7 bits (66), Expect = 5.0
 Identities = 17/58 (29%), Positives = 28/58 (48%)
 Frame = +2

Query: 44  FFKTLY*ISSSLICNFIRFVSLFCCILFTVFFIYFLCITLTMFFCPFIHLFNDFFCIF 217
           FF + +   S  + + +  +S F  + F+ FF  FL   L+ FF P   LF+    +F
Sbjct: 53  FFLSFFPSFSLSLSSSLPPLSFFLFLSFSFFFFPFLSFFLSFFFFPSFFLFSFLLSLF 110


>BC113387-1|AAI13388.1|  248|Homo sapiens family with sequence
           similarity 133, member A protein.
          Length = 248

 Score = 29.9 bits (64), Expect = 8.7
 Identities = 21/67 (31%), Positives = 36/67 (53%)
 Frame = -2

Query: 633 KQKETRRTMKLNRNLRQLSDNTLMTPMQKKHRVKRKRKSPLLPKQLIKKVKSRYDKQREK 454
           K++  RR  K NR+ +    +T  +  + K  VK+K+KS     +  K V+S   K+R+K
Sbjct: 125 KKQGKRRKKKKNRSYKSSQSSTHESESESKESVKKKKKSK-DETEKEKDVRS-LSKKRKK 182

Query: 453 TILNVKP 433
           +  + KP
Sbjct: 183 SYPDDKP 189


>BC113385-1|AAI13386.1|  248|Homo sapiens family with sequence
           similarity 133, member A protein.
          Length = 248

 Score = 29.9 bits (64), Expect = 8.7
 Identities = 21/67 (31%), Positives = 36/67 (53%)
 Frame = -2

Query: 633 KQKETRRTMKLNRNLRQLSDNTLMTPMQKKHRVKRKRKSPLLPKQLIKKVKSRYDKQREK 454
           K++  RR  K NR+ +    +T  +  + K  VK+K+KS     +  K V+S   K+R+K
Sbjct: 125 KKQGKRRKKKKNRSYKSSQSSTHESESESKESVKKKKKSK-DETEKEKDVRS-LSKKRKK 182

Query: 453 TILNVKP 433
           +  + KP
Sbjct: 183 SYPDDKP 189


>AL009173-2|CAI42611.1|  248|Homo sapiens novel protein protein.
          Length = 248

 Score = 29.9 bits (64), Expect = 8.7
 Identities = 21/67 (31%), Positives = 36/67 (53%)
 Frame = -2

Query: 633 KQKETRRTMKLNRNLRQLSDNTLMTPMQKKHRVKRKRKSPLLPKQLIKKVKSRYDKQREK 454
           K++  RR  K NR+ +    +T  +  + K  VK+K+KS     +  K V+S   K+R+K
Sbjct: 125 KKQGKRRKKKKNRSYKSSQSSTHESESESKESVKKKKKSK-DETEKEKDVRS-LSKKRKK 182

Query: 453 TILNVKP 433
           +  + KP
Sbjct: 183 SYPDDKP 189


>AK094978-1|BAC04467.1|  248|Homo sapiens protein ( Homo sapiens
           cDNA FLJ37659 fis, clone BRHIP2010610, weakly similar to
           GAR2 PROTEIN. ).
          Length = 248

 Score = 29.9 bits (64), Expect = 8.7
 Identities = 21/67 (31%), Positives = 36/67 (53%)
 Frame = -2

Query: 633 KQKETRRTMKLNRNLRQLSDNTLMTPMQKKHRVKRKRKSPLLPKQLIKKVKSRYDKQREK 454
           K++  RR  K NR+ +    +T  +  + K  VK+K+KS     +  K V+S   K+R+K
Sbjct: 125 KKQGKRRKKKKNRSYKSSQSSTHESESESKESVKKKKKSK-DETEKEKDVRS-LSKKRKK 182

Query: 453 TILNVKP 433
           +  + KP
Sbjct: 183 SYPDDKP 189


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,588,506
Number of Sequences: 237096
Number of extensions: 1314589
Number of successful extensions: 4447
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4116
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4443
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7647512560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)