Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12h24r
(673 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT023558-1|AAY84958.1| 277|Drosophila melanogaster IP09724p pro... 72 6e-13
AE014296-447|AAF47641.1| 277|Drosophila melanogaster CG15877-PA... 72 6e-13
AY058441-1|AAL13670.1| 459|Drosophila melanogaster GH22016p pro... 31 1.4
AE014134-3238|AAF53891.1| 459|Drosophila melanogaster CG10949-P... 31 1.4
AY061302-1|AAL28850.1| 814|Drosophila melanogaster LD21614p pro... 29 4.4
AE014296-96|AAF47383.2| 814|Drosophila melanogaster CG6905-PA p... 29 4.4
AY070973-1|AAL48595.1| 349|Drosophila melanogaster RE07395p pro... 29 5.8
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 29 5.8
AE014297-1913|AAF55108.2| 349|Drosophila melanogaster CG33332-P... 29 5.8
AE013599-1757|AAF58345.1| 607|Drosophila melanogaster CG6209-PA... 29 5.8
AY122162-1|AAM52674.1| 785|Drosophila melanogaster LD23562p pro... 29 7.6
AL022018-7|CAA17684.1| 771|Drosophila melanogaster EG:8D8.4 pro... 29 7.6
AE014298-186|AAF45610.1| 771|Drosophila melanogaster CG11417-PA... 29 7.6
>BT023558-1|AAY84958.1| 277|Drosophila melanogaster IP09724p
protein.
Length = 277
Score = 72.1 bits (169), Expect = 6e-13
Identities = 34/104 (32%), Positives = 64/104 (61%), Gaps = 1/104 (0%)
Frame = -1
Query: 478 SIRQTKRENYLKR-QAQAAELSKNQLKSQCLSYLSQWKHDKQNWKFMKVKQLWLLKNKFS 302
++RQ K++ + +R +AQ ++ S K YL +WK +Q+WKF K++Q+ + + F
Sbjct: 148 TVRQKKKQKHQQRLEAQKSQSSNKDAKVN-KEYLLKWKESRQDWKFNKLRQISIQQTAFD 206
Query: 301 TNLVPDESWQTLIEYFESAKGNVRTLLLEDAKKVIKQMDEWTEK 170
+ DE W T +EY S++G R+ + + A++VI+++D+ EK
Sbjct: 207 VEKLDDELWPTALEYLASSQGAARSKISQLAEEVIQKLDKEGEK 250
>AE014296-447|AAF47641.1| 277|Drosophila melanogaster CG15877-PA
protein.
Length = 277
Score = 72.1 bits (169), Expect = 6e-13
Identities = 34/104 (32%), Positives = 64/104 (61%), Gaps = 1/104 (0%)
Frame = -1
Query: 478 SIRQTKRENYLKR-QAQAAELSKNQLKSQCLSYLSQWKHDKQNWKFMKVKQLWLLKNKFS 302
++RQ K++ + +R +AQ ++ S K YL +WK +Q+WKF K++Q+ + + F
Sbjct: 148 TVRQKKKQKHQQRLEAQKSQSSNKDAKVN-KEYLLKWKESRQDWKFNKLRQISIQQTAFD 206
Query: 301 TNLVPDESWQTLIEYFESAKGNVRTLLLEDAKKVIKQMDEWTEK 170
+ DE W T +EY S++G R+ + + A++VI+++D+ EK
Sbjct: 207 VEKLDDELWPTALEYLASSQGAARSKISQLAEEVIQKLDKEGEK 250
>AY058441-1|AAL13670.1| 459|Drosophila melanogaster GH22016p
protein.
Length = 459
Score = 31.1 bits (67), Expect = 1.4
Identities = 18/58 (31%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Frame = -2
Query: 552 QKKHRVKRKRKSPLLPKQLIKKVKSR---YDKQREKTILNVKPKLQNFQKINSNLSVS 388
++K + + LL +QLI+ VKS YD+ + + N+ K + +++I+ NL+VS
Sbjct: 123 RRKDEEEEDSQDDLLNEQLIELVKSHPVLYDRHKIRVSKNLAAKNEAWREISENLNVS 180
>AE014134-3238|AAF53891.1| 459|Drosophila melanogaster CG10949-PA
protein.
Length = 459
Score = 31.1 bits (67), Expect = 1.4
Identities = 18/58 (31%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Frame = -2
Query: 552 QKKHRVKRKRKSPLLPKQLIKKVKSR---YDKQREKTILNVKPKLQNFQKINSNLSVS 388
++K + + LL +QLI+ VKS YD+ + + N+ K + +++I+ NL+VS
Sbjct: 123 RRKDEEEEDSQDDLLNEQLIELVKSHPVLYDRHKIRVSKNLAAKNEAWREISENLNVS 180
>AY061302-1|AAL28850.1| 814|Drosophila melanogaster LD21614p
protein.
Length = 814
Score = 29.5 bits (63), Expect = 4.4
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = -2
Query: 636 RKQKETRRTMKLNRNLRQLSDNTLMTPMQKKHRVKRKRKSPLLPKQLIKKVK 481
R +KE R + + L+Q +N + T M + +RKR +LP I ++
Sbjct: 251 RSEKEERERKRDKQKLKQRKENEVPTAMLQNMEPERKRSKLVLPTPQISDME 302
>AE014296-96|AAF47383.2| 814|Drosophila melanogaster CG6905-PA
protein.
Length = 814
Score = 29.5 bits (63), Expect = 4.4
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = -2
Query: 636 RKQKETRRTMKLNRNLRQLSDNTLMTPMQKKHRVKRKRKSPLLPKQLIKKVK 481
R +KE R + + L+Q +N + T M + +RKR +LP I ++
Sbjct: 251 RSEKEERERKRDKQKLKQRKENEVPTAMLQNMEPERKRSKLVLPTPQISDME 302
>AY070973-1|AAL48595.1| 349|Drosophila melanogaster RE07395p
protein.
Length = 349
Score = 29.1 bits (62), Expect = 5.8
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = -2
Query: 555 MQKKHRVKRKRKSPLLPKQLIKKVKSRYDKQREKTILNVKPKLQNFQK 412
M K+H+ K KR+ L+ K K + +K++E KP+ + F +
Sbjct: 266 MAKRHKKKHKREESLVELHQKKLRKEQREKEKELAASGSKPERRPFSR 313
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 29.1 bits (62), Expect = 5.8
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +3
Query: 207 FASSSNNVRTFPFADSKYSIRVCQDSSGTKLVENLFLSSHNCLTF 341
F + NN R F D + RV S + E++ LS HN +TF
Sbjct: 161 FKPTFNNDRGTSFIDVTFVSRVLVAGSNWMVHEDITLSDHNLITF 205
>AE014297-1913|AAF55108.2| 349|Drosophila melanogaster CG33332-PA
protein.
Length = 349
Score = 29.1 bits (62), Expect = 5.8
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = -2
Query: 555 MQKKHRVKRKRKSPLLPKQLIKKVKSRYDKQREKTILNVKPKLQNFQK 412
M K+H+ K KR+ L+ K K + +K++E KP+ + F +
Sbjct: 266 MAKRHKKKHKREESLVELHQKKLRKEQREKEKELAASGSKPERRPFSR 313
>AE013599-1757|AAF58345.1| 607|Drosophila melanogaster CG6209-PA
protein.
Length = 607
Score = 29.1 bits (62), Expect = 5.8
Identities = 19/63 (30%), Positives = 32/63 (50%)
Frame = -2
Query: 642 ANRKQKETRRTMKLNRNLRQLSDNTLMTPMQKKHRVKRKRKSPLLPKQLIKKVKSRYDKQ 463
A RK++E + L+ D T K + K K K+ + K+L+K++K + KQ
Sbjct: 257 AKRKEREKKEGKPLDCTKPSEDDET--GAKNKAEKKKAKEKAEI--KRLLKEIKGKCKKQ 312
Query: 462 REK 454
RE+
Sbjct: 313 REE 315
>AY122162-1|AAM52674.1| 785|Drosophila melanogaster LD23562p
protein.
Length = 785
Score = 28.7 bits (61), Expect = 7.6
Identities = 20/71 (28%), Positives = 30/71 (42%)
Frame = -1
Query: 565 DDSDAEETPRXXXXXKPVITETTDKKGKKSIRQTKRENYLKRQAQAAELSKNQLKSQCLS 386
+DS+AEE+P K V + K KK+ +Q + Y A E K + K Q
Sbjct: 457 EDSEAEESPAEEAAQKAVSEDPQKSKPKKTSKQERIATYKNLLADILEQEKKE-KEQKYE 515
Query: 385 YLSQWKHDKQN 353
W + Q+
Sbjct: 516 MEMTWNVEPQH 526
>AL022018-7|CAA17684.1| 771|Drosophila melanogaster EG:8D8.4
protein.
Length = 771
Score = 28.7 bits (61), Expect = 7.6
Identities = 20/71 (28%), Positives = 30/71 (42%)
Frame = -1
Query: 565 DDSDAEETPRXXXXXKPVITETTDKKGKKSIRQTKRENYLKRQAQAAELSKNQLKSQCLS 386
+DS+AEE+P K V + K KK+ +Q + Y A E K + K Q
Sbjct: 443 EDSEAEESPAEEAAQKAVSEDPQKSKPKKTSKQERIATYKNLLADILEQEKKE-KEQKYE 501
Query: 385 YLSQWKHDKQN 353
W + Q+
Sbjct: 502 MEMTWNVEPQH 512
>AE014298-186|AAF45610.1| 771|Drosophila melanogaster CG11417-PA
protein.
Length = 771
Score = 28.7 bits (61), Expect = 7.6
Identities = 20/71 (28%), Positives = 30/71 (42%)
Frame = -1
Query: 565 DDSDAEETPRXXXXXKPVITETTDKKGKKSIRQTKRENYLKRQAQAAELSKNQLKSQCLS 386
+DS+AEE+P K V + K KK+ +Q + Y A E K + K Q
Sbjct: 443 EDSEAEESPAEEAAQKAVSEDPQKSKPKKTSKQERIATYKNLLADILEQEKKE-KEQKYE 501
Query: 385 YLSQWKHDKQN 353
W + Q+
Sbjct: 502 MEMTWNVEPQH 512
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,356,717
Number of Sequences: 53049
Number of extensions: 427678
Number of successful extensions: 2000
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1914
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1994
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2910007350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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