Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12h24f
(612 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC006224-1|AAH06224.1| 194|Homo sapiens MGC11257 protein protein. 44 3e-04
AF495721-1|AAQ06675.1| 194|Homo sapiens unknown protein. 44 3e-04
BC130449-1|AAI30450.1| 1253|Homo sapiens PPP1R9A protein protein. 33 0.79
BC113387-1|AAI13388.1| 248|Homo sapiens family with sequence si... 30 7.4
BC113385-1|AAI13386.1| 248|Homo sapiens family with sequence si... 30 7.4
AL009173-2|CAI42611.1| 248|Homo sapiens novel protein protein. 30 7.4
AK094978-1|BAC04467.1| 248|Homo sapiens protein ( Homo sapiens ... 30 7.4
X62155-1|CAA44080.1| 223|Homo sapiens Myf4 protein protein. 29 9.8
X17651-1|CAA35641.1| 246|Homo sapiens protein ( Human Myf-4 mRN... 29 9.8
BT007233-1|AAP35897.1| 224|Homo sapiens myogenin (myogenic fact... 29 9.8
BC053899-1|AAH53899.1| 224|Homo sapiens myogenin (myogenic fact... 29 9.8
AF050501-1|AAG22573.1| 215|Homo sapiens myogenin protein. 29 9.8
>BC006224-1|AAH06224.1| 194|Homo sapiens MGC11257 protein protein.
Length = 194
Score = 44.4 bits (100), Expect = 3e-04
Identities = 33/94 (35%), Positives = 44/94 (46%)
Frame = +1
Query: 322 SKPAAVKRQHVDDSDAEETPRXXXXXXPVITETTDKKGKKSIRQTKRENYLKRQAQAAEL 501
SK AV R +D ++ E +P V+ K+ KK RQ RE L Q A
Sbjct: 42 SKGEAVLRPGLD-AEPELSPEEQR----VLERKLKKERKKEERQRLREAGLVAQHPPARR 96
Query: 502 SKNQLKSQCLSYLSQWNHDKQNWKFMKVKQLWLL 603
S +L L YL +W +NW+F K +Q WLL
Sbjct: 97 SGAEL---ALDYLCRWAQKHKNWRFQKTRQTWLL 127
>AF495721-1|AAQ06675.1| 194|Homo sapiens unknown protein.
Length = 194
Score = 44.4 bits (100), Expect = 3e-04
Identities = 33/94 (35%), Positives = 44/94 (46%)
Frame = +1
Query: 322 SKPAAVKRQHVDDSDAEETPRXXXXXXPVITETTDKKGKKSIRQTKRENYLKRQAQAAEL 501
SK AV R +D ++ E +P V+ K+ KK RQ RE L Q A
Sbjct: 42 SKGEAVLRPGLD-AEPELSPEEQR----VLERKLKKERKKEERQRLREAGLVAQHPPARR 96
Query: 502 SKNQLKSQCLSYLSQWNHDKQNWKFMKVKQLWLL 603
S +L L YL +W +NW+F K +Q WLL
Sbjct: 97 SGAEL---ALDYLCRWAQKHKNWRFQKTRQTWLL 127
>BC130449-1|AAI30450.1| 1253|Homo sapiens PPP1R9A protein protein.
Length = 1253
Score = 33.1 bits (72), Expect = 0.79
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +2
Query: 305 RTMKLNRNLRQLSDNTL-MTPMQKKHRVKRKRKSPLLPKQLIKKVKSRYDKQREKTILNV 481
+T L+++L SD L MT Q + VK+K K + + +K + + +KQREK
Sbjct: 1169 KTPGLSQSLALSSDEALGMTASQDRAVVKKKLKEMKMSLEKARKAQEKMEKQREKLRRKE 1228
Query: 482 KPKLQNFQK 508
+ ++Q K
Sbjct: 1229 QEQMQRKSK 1237
>BC113387-1|AAI13388.1| 248|Homo sapiens family with sequence
similarity 133, member A protein.
Length = 248
Score = 29.9 bits (64), Expect = 7.4
Identities = 21/67 (31%), Positives = 36/67 (53%)
Frame = +2
Query: 287 KQKETRRTMKLNRNLRQLSDNTLMTPMQKKHRVKRKRKSPLLPKQLIKKVKSRYDKQREK 466
K++ RR K NR+ + +T + + K VK+K+KS + K V+S K+R+K
Sbjct: 125 KKQGKRRKKKKNRSYKSSQSSTHESESESKESVKKKKKSK-DETEKEKDVRS-LSKKRKK 182
Query: 467 TILNVKP 487
+ + KP
Sbjct: 183 SYPDDKP 189
>BC113385-1|AAI13386.1| 248|Homo sapiens family with sequence
similarity 133, member A protein.
Length = 248
Score = 29.9 bits (64), Expect = 7.4
Identities = 21/67 (31%), Positives = 36/67 (53%)
Frame = +2
Query: 287 KQKETRRTMKLNRNLRQLSDNTLMTPMQKKHRVKRKRKSPLLPKQLIKKVKSRYDKQREK 466
K++ RR K NR+ + +T + + K VK+K+KS + K V+S K+R+K
Sbjct: 125 KKQGKRRKKKKNRSYKSSQSSTHESESESKESVKKKKKSK-DETEKEKDVRS-LSKKRKK 182
Query: 467 TILNVKP 487
+ + KP
Sbjct: 183 SYPDDKP 189
>AL009173-2|CAI42611.1| 248|Homo sapiens novel protein protein.
Length = 248
Score = 29.9 bits (64), Expect = 7.4
Identities = 21/67 (31%), Positives = 36/67 (53%)
Frame = +2
Query: 287 KQKETRRTMKLNRNLRQLSDNTLMTPMQKKHRVKRKRKSPLLPKQLIKKVKSRYDKQREK 466
K++ RR K NR+ + +T + + K VK+K+KS + K V+S K+R+K
Sbjct: 125 KKQGKRRKKKKNRSYKSSQSSTHESESESKESVKKKKKSK-DETEKEKDVRS-LSKKRKK 182
Query: 467 TILNVKP 487
+ + KP
Sbjct: 183 SYPDDKP 189
>AK094978-1|BAC04467.1| 248|Homo sapiens protein ( Homo sapiens
cDNA FLJ37659 fis, clone BRHIP2010610, weakly similar to
GAR2 PROTEIN. ).
Length = 248
Score = 29.9 bits (64), Expect = 7.4
Identities = 21/67 (31%), Positives = 36/67 (53%)
Frame = +2
Query: 287 KQKETRRTMKLNRNLRQLSDNTLMTPMQKKHRVKRKRKSPLLPKQLIKKVKSRYDKQREK 466
K++ RR K NR+ + +T + + K VK+K+KS + K V+S K+R+K
Sbjct: 125 KKQGKRRKKKKNRSYKSSQSSTHESESESKESVKKKKKSK-DETEKEKDVRS-LSKKRKK 182
Query: 467 TILNVKP 487
+ + KP
Sbjct: 183 SYPDDKP 189
>X62155-1|CAA44080.1| 223|Homo sapiens Myf4 protein protein.
Length = 223
Score = 29.5 bits (63), Expect = 9.8
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +2
Query: 368 QKKHRVKRKRKSPLLPKQLIKKVKSRYDKQREKTILNVKPKLQNFQKINS 517
+K V R+R + L K+ +KKV ++ + T+LN +L + + S
Sbjct: 75 RKSVSVDRRRAATLREKRRLKKVNEAFEALKRSTLLNPNQRLPKVEILRS 124
>X17651-1|CAA35641.1| 246|Homo sapiens protein ( Human Myf-4 mRNA
for myogenic determination factor. ).
Length = 246
Score = 29.5 bits (63), Expect = 9.8
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +2
Query: 368 QKKHRVKRKRKSPLLPKQLIKKVKSRYDKQREKTILNVKPKLQNFQKINS 517
+K V R+R + L K+ +KKV ++ + T+LN +L + + S
Sbjct: 75 RKSVSVDRRRAATLREKRRLKKVNEAFEALKRSTLLNPNQRLPKVEILRS 124
>BT007233-1|AAP35897.1| 224|Homo sapiens myogenin (myogenic factor
4) protein.
Length = 224
Score = 29.5 bits (63), Expect = 9.8
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +2
Query: 368 QKKHRVKRKRKSPLLPKQLIKKVKSRYDKQREKTILNVKPKLQNFQKINS 517
+K V R+R + L K+ +KKV ++ + T+LN +L + + S
Sbjct: 75 RKSVSVDRRRAATLREKRRLKKVNEAFEALKRSTLLNPNQRLPKVEILRS 124
>BC053899-1|AAH53899.1| 224|Homo sapiens myogenin (myogenic factor
4) protein.
Length = 224
Score = 29.5 bits (63), Expect = 9.8
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +2
Query: 368 QKKHRVKRKRKSPLLPKQLIKKVKSRYDKQREKTILNVKPKLQNFQKINS 517
+K V R+R + L K+ +KKV ++ + T+LN +L + + S
Sbjct: 75 RKSVSVDRRRAATLREKRRLKKVNEAFEALKRSTLLNPNQRLPKVEILRS 124
>AF050501-1|AAG22573.1| 215|Homo sapiens myogenin protein.
Length = 215
Score = 29.5 bits (63), Expect = 9.8
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +2
Query: 368 QKKHRVKRKRKSPLLPKQLIKKVKSRYDKQREKTILNVKPKLQNFQKINS 517
+K V R+R + L K+ +KKV ++ + T+LN +L + + S
Sbjct: 75 RKSVSVDRRRAATLREKRRLKKVNEAFEALKRSTLLNPNQRLPKVEILRS 124
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,395,047
Number of Sequences: 237096
Number of extensions: 869320
Number of successful extensions: 2672
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2520
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2671
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6522878360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -