Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12h13f
         (608 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-1890|AAF50107.1|  143|Drosophila melanogaster CG6302-PA...   119   3e-27
AY118830-1|AAM50690.1|  125|Drosophila melanogaster GH28557p pro...    46   4e-05
AE014296-3248|AAF49093.1|  125|Drosophila melanogaster CG7770-PA...    46   4e-05
AE014298-1416|AAF46559.1| 1161|Drosophila melanogaster CG15311-P...    29   3.8  
AE014134-2526|AAS64711.1|  181|Drosophila melanogaster CG33308-P...    29   6.6  

>AE014296-1890|AAF50107.1|  143|Drosophila melanogaster CG6302-PA
           protein.
          Length = 143

 Score =  119 bits (287), Expect = 3e-27
 Identities = 56/106 (52%), Positives = 76/106 (71%)
 Frame = +3

Query: 258 TNEEIFAGFQTLRNEQRQLGSKISELQMELNEHKIVIETLRGVELTRKCFRMFGGVLVER 437
           + E I A FQ LRNEQR L + ++ L+M+L EHK VIETL   +  RKCFR  GGVL ER
Sbjct: 11  SQEAIVAQFQQLRNEQRNLVNSLNTLEMDLREHKTVIETLEAADPERKCFRQIGGVLCER 70

Query: 438 TVAEVLPELISNYEQLPKAIQSLEDQLTQKGEEINKYIEEHDIRIQ 575
           TV EVLP+L+ N + + K IQ + + L++KG E+NK+ EEH+I+I+
Sbjct: 71  TVKEVLPQLVENKDFIAKTIQMVTNDLSKKGSELNKFKEEHNIKIR 116


>AY118830-1|AAM50690.1|  125|Drosophila melanogaster GH28557p
           protein.
          Length = 125

 Score = 46.0 bits (104), Expect = 4e-05
 Identities = 29/110 (26%), Positives = 58/110 (52%)
 Frame = +3

Query: 225 MAKNTSKVGKKTNEEIFAGFQTLRNEQRQLGSKISELQMELNEHKIVIETLRGVELTRKC 404
           M K ++ + KK   EI   +Q L+    ++  + + L+ +LNE+K V++ L  +    K 
Sbjct: 1   MDKKSAALYKKMQAEI-ESYQNLQKSCLKMVKQRAVLESQLNENKCVLDELNLLGPDNKV 59

Query: 405 FRMFGGVLVERTVAEVLPELISNYEQLPKAIQSLEDQLTQKGEEINKYIE 554
           +++FG VLV++ + E    +    E + K ++S  D L    +++ K+ E
Sbjct: 60  YKLFGPVLVKQELEESRQNVGKRIEYISKELKSSTDALENMEKDMLKHRE 109


>AE014296-3248|AAF49093.1|  125|Drosophila melanogaster CG7770-PA
           protein.
          Length = 125

 Score = 46.0 bits (104), Expect = 4e-05
 Identities = 29/110 (26%), Positives = 58/110 (52%)
 Frame = +3

Query: 225 MAKNTSKVGKKTNEEIFAGFQTLRNEQRQLGSKISELQMELNEHKIVIETLRGVELTRKC 404
           M K ++ + KK   EI   +Q L+    ++  + + L+ +LNE+K V++ L  +    K 
Sbjct: 1   MDKKSAALYKKMQAEI-ESYQNLQKSCLKMVKQRAVLESQLNENKCVLDELNLLGPDNKV 59

Query: 405 FRMFGGVLVERTVAEVLPELISNYEQLPKAIQSLEDQLTQKGEEINKYIE 554
           +++FG VLV++ + E    +    E + K ++S  D L    +++ K+ E
Sbjct: 60  YKLFGPVLVKQELEESRQNVGKRIEYISKELKSSTDALENMEKDMLKHRE 109


>AE014298-1416|AAF46559.1| 1161|Drosophila melanogaster CG15311-PA
           protein.
          Length = 1161

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
 Frame = +3

Query: 447 EVLPELISNYEQLPKAIQSLEDQLTQKGEEIN--KYIEEHDIR 569
           E  PEL S+YE   ++   LE+   ++GEE N   YI++++ R
Sbjct: 827 ETHPELYSDYEDDYESAAELEEAQQERGEEANLPPYIKKYNRR 869


>AE014134-2526|AAS64711.1|  181|Drosophila melanogaster CG33308-PA
           protein.
          Length = 181

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 22/105 (20%), Positives = 47/105 (44%), Gaps = 4/105 (3%)
 Frame = +3

Query: 255 KTNEEIFAGFQTLRNEQRQLGSKISELQMELNEHKIVIETL-RGVELTRKCFRMFGGVLV 431
           KTNE    G   L  E+  +    S L+ + N     +ET+ R           +  V V
Sbjct: 3   KTNETCINGDIALEKEESLIDISSSSLEAQPNLSTSELETIVRNAVKQIPTPPNYVDVTV 62

Query: 432 ERTVAEVLPELISNYEQLPKAIQSLE---DQLTQKGEEINKYIEE 557
                 +LP++++ Y+ +   +++++   D  +++ E +++ I E
Sbjct: 63  NSIANAILPKILNKYDTIEMKVENIQKSLDTYSRQAEAVDQDIAE 107


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,695,632
Number of Sequences: 53049
Number of extensions: 492409
Number of successful extensions: 1302
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1269
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1301
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2503659279
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)