Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12h13f
(608 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006661-3|AAF39891.1| 141|Caenorhabditis elegans Temporarily a... 78 4e-15
Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z93398-4|CAH04743.1| 4410|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z92788-4|CAH04711.1| 4410|Caenorhabditis elegans Hypothetical pr... 30 1.1
AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical ... 30 1.1
AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical ... 30 1.1
AL031637-2|CAH04759.1| 4410|Caenorhabditis elegans Hypothetical ... 30 1.1
AJ505905-1|CAD44516.1| 3522|Caenorhabditis elegans VAB-10B prote... 30 1.1
AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B prote... 30 1.1
Z70756-1|CAA94789.1| 1295|Caenorhabditis elegans Hypothetical pr... 29 3.4
U40417-13|AAA81420.1| 1330|Caenorhabditis elegans Hypothetical p... 28 4.5
Z80224-1|CAB02323.1| 1577|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z67755-10|CAA91761.1| 1577|Caenorhabditis elegans Hypothetical p... 28 6.0
Z67754-4|CAA91753.1| 1577|Caenorhabditis elegans Hypothetical pr... 28 6.0
AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein. 28 6.0
AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (droso... 28 6.0
AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (droso... 28 6.0
AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (droso... 28 6.0
AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (droso... 28 6.0
AC006714-6|AAN84810.2| 339|Caenorhabditis elegans Hypothetical ... 28 6.0
AC006714-5|AAN84811.1| 224|Caenorhabditis elegans Hypothetical ... 28 6.0
AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein. 28 6.0
Z81593-2|CAB04737.1| 260|Caenorhabditis elegans Hypothetical pr... 27 7.9
Z30215-7|CAA82940.1| 322|Caenorhabditis elegans Hypothetical pr... 27 7.9
Z29560-13|CAA82665.1| 322|Caenorhabditis elegans Hypothetical p... 27 7.9
U58728-1|AAB00588.1| 430|Caenorhabditis elegans Temporarily ass... 27 7.9
AB107359-1|BAD89380.1| 260|Caenorhabditis elegans troponin I 3 ... 27 7.9
>AC006661-3|AAF39891.1| 141|Caenorhabditis elegans Temporarily
assigned gene nameprotein 355 protein.
Length = 141
Score = 78.2 bits (184), Expect = 4e-15
Identities = 34/107 (31%), Positives = 66/107 (61%)
Frame = +3
Query: 252 KKTNEEIFAGFQTLRNEQRQLGSKISELQMELNEHKIVIETLRGVELTRKCFRMFGGVLV 431
++ ++ F+ LR++Q+ + ++++ ++ E E V+E ++ +E +KCFR+ LV
Sbjct: 14 QEEQRKVVEKFKALRDQQQDIAAEVTRIEEERREFGRVLEVIKDLEPDQKCFRLISDTLV 73
Query: 432 ERTVAEVLPELISNYEQLPKAIQSLEDQLTQKGEEINKYIEEHDIRI 572
E TV +V+P+L +N L + L DQL +KG+E+N + H+IR+
Sbjct: 74 EYTVKDVIPDLQNNIANLTIVSKQLNDQLVEKGKELNTHKTTHNIRL 120
>Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical protein
ZK1151.1c protein.
Length = 4955
Score = 30.3 bits (65), Expect = 1.1
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = +3
Query: 441 VAEVLPELISNYEQLPKAIQSLEDQLTQKGEEINKYIEEHDIRIQ 575
V EV+ E L +A+ +L +QLT + +E+NK++++ D +Q
Sbjct: 3409 VEEVMALCADRTETLERAL-ALMEQLTSQFDELNKWLDQMDAELQ 3452
>Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical protein
ZK1151.1b protein.
Length = 4944
Score = 30.3 bits (65), Expect = 1.1
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = +3
Query: 441 VAEVLPELISNYEQLPKAIQSLEDQLTQKGEEINKYIEEHDIRIQ 575
V EV+ E L +A+ +L +QLT + +E+NK++++ D +Q
Sbjct: 3409 VEEVMALCADRTETLERAL-ALMEQLTSQFDELNKWLDQMDAELQ 3452
>Z93398-4|CAH04743.1| 4410|Caenorhabditis elegans Hypothetical protein
ZK1151.1g protein.
Length = 4410
Score = 30.3 bits (65), Expect = 1.1
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = +3
Query: 441 VAEVLPELISNYEQLPKAIQSLEDQLTQKGEEINKYIEEHDIRIQ 575
V EV+ E L +A+ +L +QLT + +E+NK++++ D +Q
Sbjct: 2864 VEEVMALCADRTETLERAL-ALMEQLTSQFDELNKWLDQMDAELQ 2907
>Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical protein
ZK1151.1c protein.
Length = 4955
Score = 30.3 bits (65), Expect = 1.1
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = +3
Query: 441 VAEVLPELISNYEQLPKAIQSLEDQLTQKGEEINKYIEEHDIRIQ 575
V EV+ E L +A+ +L +QLT + +E+NK++++ D +Q
Sbjct: 3409 VEEVMALCADRTETLERAL-ALMEQLTSQFDELNKWLDQMDAELQ 3452
>Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical protein
ZK1151.1b protein.
Length = 4944
Score = 30.3 bits (65), Expect = 1.1
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = +3
Query: 441 VAEVLPELISNYEQLPKAIQSLEDQLTQKGEEINKYIEEHDIRIQ 575
V EV+ E L +A+ +L +QLT + +E+NK++++ D +Q
Sbjct: 3409 VEEVMALCADRTETLERAL-ALMEQLTSQFDELNKWLDQMDAELQ 3452
>Z92788-4|CAH04711.1| 4410|Caenorhabditis elegans Hypothetical protein
ZK1151.1g protein.
Length = 4410
Score = 30.3 bits (65), Expect = 1.1
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = +3
Query: 441 VAEVLPELISNYEQLPKAIQSLEDQLTQKGEEINKYIEEHDIRIQ 575
V EV+ E L +A+ +L +QLT + +E+NK++++ D +Q
Sbjct: 2864 VEEVMALCADRTETLERAL-ALMEQLTSQFDELNKWLDQMDAELQ 2907
>AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical
protein ZK1151.1c protein.
Length = 4955
Score = 30.3 bits (65), Expect = 1.1
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = +3
Query: 441 VAEVLPELISNYEQLPKAIQSLEDQLTQKGEEINKYIEEHDIRIQ 575
V EV+ E L +A+ +L +QLT + +E+NK++++ D +Q
Sbjct: 3409 VEEVMALCADRTETLERAL-ALMEQLTSQFDELNKWLDQMDAELQ 3452
>AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical
protein ZK1151.1b protein.
Length = 4944
Score = 30.3 bits (65), Expect = 1.1
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = +3
Query: 441 VAEVLPELISNYEQLPKAIQSLEDQLTQKGEEINKYIEEHDIRIQ 575
V EV+ E L +A+ +L +QLT + +E+NK++++ D +Q
Sbjct: 3409 VEEVMALCADRTETLERAL-ALMEQLTSQFDELNKWLDQMDAELQ 3452
>AL031637-2|CAH04759.1| 4410|Caenorhabditis elegans Hypothetical
protein ZK1151.1g protein.
Length = 4410
Score = 30.3 bits (65), Expect = 1.1
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = +3
Query: 441 VAEVLPELISNYEQLPKAIQSLEDQLTQKGEEINKYIEEHDIRIQ 575
V EV+ E L +A+ +L +QLT + +E+NK++++ D +Q
Sbjct: 2864 VEEVMALCADRTETLERAL-ALMEQLTSQFDELNKWLDQMDAELQ 2907
>AJ505905-1|CAD44516.1| 3522|Caenorhabditis elegans VAB-10B protein
protein.
Length = 3522
Score = 30.3 bits (65), Expect = 1.1
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = +3
Query: 441 VAEVLPELISNYEQLPKAIQSLEDQLTQKGEEINKYIEEHDIRIQ 575
V EV+ E L +A+ +L +QLT + +E+NK++++ D +Q
Sbjct: 3409 VEEVMALCADRTETLERAL-ALMEQLTSQFDELNKWLDQMDAELQ 3452
>AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B protein
protein.
Length = 4944
Score = 30.3 bits (65), Expect = 1.1
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = +3
Query: 441 VAEVLPELISNYEQLPKAIQSLEDQLTQKGEEINKYIEEHDIRIQ 575
V EV+ E L +A+ +L +QLT + +E+NK++++ D +Q
Sbjct: 3409 VEEVMALCADRTETLERAL-ALMEQLTSQFDELNKWLDQMDAELQ 3452
>Z70756-1|CAA94789.1| 1295|Caenorhabditis elegans Hypothetical
protein T06E4.1 protein.
Length = 1295
Score = 28.7 bits (61), Expect = 3.4
Identities = 25/96 (26%), Positives = 41/96 (42%)
Frame = +3
Query: 264 EEIFAGFQTLRNEQRQLGSKISELQMELNEHKIVIETLRGVELTRKCFRMFGGVLVERTV 443
E + +T+R E + K+ LQ+EL E I+ VEL R+ L +
Sbjct: 549 ENTVSELETMRREYKASVDKVCSLQLELEE----IQHETSVELEEAEIRIKELELAQEEA 604
Query: 444 AEVLPELISNYEQLPKAIQSLEDQLTQKGEEINKYI 551
+ + E + + Q L DQL K E+I + +
Sbjct: 605 VKTGSSQLKKLEIVQEDCQKLRDQL--KEEQIQQLV 638
>U40417-13|AAA81420.1| 1330|Caenorhabditis elegans Hypothetical
protein T08A9.1 protein.
Length = 1330
Score = 28.3 bits (60), Expect = 4.5
Identities = 24/106 (22%), Positives = 48/106 (45%), Gaps = 4/106 (3%)
Frame = +3
Query: 291 LRNEQRQLGSKISELQMELNEHKIVIETLRGVELTRKCFRMFGGVLVERTVAEVLPELIS 470
L+N ++LG + L+ EL K T +E + +E T AE + +
Sbjct: 762 LKNRVKELGESVESLETELENKK---STESNLEAKLAEMTVSHKKEIENTQAECIKRMSV 818
Query: 471 NYEQLPKAI-QSLEDQLTQKG---EEINKYIEEHDIRIQRADRTMP 596
+E + ++ + ++Q+ K EE+ +E+ +I ++A R P
Sbjct: 819 EFELMTDSMSRQSKEQIESKDREIEELKAKLEKQNIAHEKALRNDP 864
>Z80224-1|CAB02323.1| 1577|Caenorhabditis elegans Hypothetical
protein C34E11.3 protein.
Length = 1577
Score = 27.9 bits (59), Expect = 6.0
Identities = 24/91 (26%), Positives = 39/91 (42%)
Frame = +3
Query: 285 QTLRNEQRQLGSKISELQMELNEHKIVIETLRGVELTRKCFRMFGGVLVERTVAEVLPEL 464
Q L+N ++ S I+ L+ LN+ + I+ R KC T E L E
Sbjct: 54 QRLQNAEQSESSLINMLEDRLNQAENQIQDYRDENTVLKCELRELQETTFATSDEKLREK 113
Query: 465 ISNYEQLPKAIQSLEDQLTQKGEEINKYIEE 557
I E L + +QL + +++ + IEE
Sbjct: 114 IRTTEGLCDELMEENEQLKAEVKDLQQEIEE 144
>Z67755-10|CAA91761.1| 1577|Caenorhabditis elegans Hypothetical
protein C34E11.3 protein.
Length = 1577
Score = 27.9 bits (59), Expect = 6.0
Identities = 24/91 (26%), Positives = 39/91 (42%)
Frame = +3
Query: 285 QTLRNEQRQLGSKISELQMELNEHKIVIETLRGVELTRKCFRMFGGVLVERTVAEVLPEL 464
Q L+N ++ S I+ L+ LN+ + I+ R KC T E L E
Sbjct: 54 QRLQNAEQSESSLINMLEDRLNQAENQIQDYRDENTVLKCELRELQETTFATSDEKLREK 113
Query: 465 ISNYEQLPKAIQSLEDQLTQKGEEINKYIEE 557
I E L + +QL + +++ + IEE
Sbjct: 114 IRTTEGLCDELMEENEQLKAEVKDLQQEIEE 144
>Z67754-4|CAA91753.1| 1577|Caenorhabditis elegans Hypothetical
protein C34E11.3 protein.
Length = 1577
Score = 27.9 bits (59), Expect = 6.0
Identities = 24/91 (26%), Positives = 39/91 (42%)
Frame = +3
Query: 285 QTLRNEQRQLGSKISELQMELNEHKIVIETLRGVELTRKCFRMFGGVLVERTVAEVLPEL 464
Q L+N ++ S I+ L+ LN+ + I+ R KC T E L E
Sbjct: 54 QRLQNAEQSESSLINMLEDRLNQAENQIQDYRDENTVLKCELRELQETTFATSDEKLREK 113
Query: 465 ISNYEQLPKAIQSLEDQLTQKGEEINKYIEE 557
I E L + +QL + +++ + IEE
Sbjct: 114 IRTTEGLCDELMEENEQLKAEVKDLQQEIEE 144
>AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein.
Length = 4250
Score = 27.9 bits (59), Expect = 6.0
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +3
Query: 477 EQLPKAIQSLEDQLTQKGEEINKYIEE 557
EQ KA++ LED L ++ EEI + ++E
Sbjct: 2780 EQKAKAVEILEDNLRRRPEEIEQELKE 2806
>AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform b protein.
Length = 4203
Score = 27.9 bits (59), Expect = 6.0
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +3
Query: 477 EQLPKAIQSLEDQLTQKGEEINKYIEE 557
EQ KA++ LED L ++ EEI + ++E
Sbjct: 2697 EQKAKAVEILEDNLRRRPEEIEQELKE 2723
>AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform a protein.
Length = 4488
Score = 27.9 bits (59), Expect = 6.0
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +3
Query: 477 EQLPKAIQSLEDQLTQKGEEINKYIEE 557
EQ KA++ LED L ++ EEI + ++E
Sbjct: 3018 EQKAKAVEILEDNLRRRPEEIEQELKE 3044
>AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform d protein.
Length = 4369
Score = 27.9 bits (59), Expect = 6.0
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +3
Query: 477 EQLPKAIQSLEDQLTQKGEEINKYIEE 557
EQ KA++ LED L ++ EEI + ++E
Sbjct: 3018 EQKAKAVEILEDNLRRRPEEIEQELKE 3044
>AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform c protein.
Length = 4447
Score = 27.9 bits (59), Expect = 6.0
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +3
Query: 477 EQLPKAIQSLEDQLTQKGEEINKYIEE 557
EQ KA++ LED L ++ EEI + ++E
Sbjct: 3018 EQKAKAVEILEDNLRRRPEEIEQELKE 3044
>AC006714-6|AAN84810.2| 339|Caenorhabditis elegans Hypothetical
protein Y119D3B.12a protein.
Length = 339
Score = 27.9 bits (59), Expect = 6.0
Identities = 15/52 (28%), Positives = 27/52 (51%)
Frame = +3
Query: 432 ERTVAEVLPELISNYEQLPKAIQSLEDQLTQKGEEINKYIEEHDIRIQRADR 587
E T + + E+ EQL K ++ L D+ +GE+ N ++ + RAD+
Sbjct: 119 EETFGQKILEIEQRREQLTKKMEDLMDEAALEGEKGN--VDAAQTAVDRADK 168
>AC006714-5|AAN84811.1| 224|Caenorhabditis elegans Hypothetical
protein Y119D3B.12b protein.
Length = 224
Score = 27.9 bits (59), Expect = 6.0
Identities = 15/52 (28%), Positives = 27/52 (51%)
Frame = +3
Query: 432 ERTVAEVLPELISNYEQLPKAIQSLEDQLTQKGEEINKYIEEHDIRIQRADR 587
E T + + E+ EQL K ++ L D+ +GE+ N ++ + RAD+
Sbjct: 119 EETFGQKILEIEQRREQLTKKMEDLMDEAALEGEKGN--VDAAQTAVDRADK 168
>AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein.
Length = 4219
Score = 27.9 bits (59), Expect = 6.0
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +3
Query: 477 EQLPKAIQSLEDQLTQKGEEINKYIEE 557
EQ KA++ LED L ++ EEI + ++E
Sbjct: 2713 EQKAKAVEILEDNLRRRPEEIEQELKE 2739
>Z81593-2|CAB04737.1| 260|Caenorhabditis elegans Hypothetical
protein T20B3.2 protein.
Length = 260
Score = 27.5 bits (58), Expect = 7.9
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +3
Query: 255 KTNEEIFAGFQTLRNEQRQLGSKISELQMELNEHKIVIETLRG 383
K E++FA L E+ + +S+ + E+N+ I + LRG
Sbjct: 109 KIYEDMFARVCALEEEKFDINFGVSQTEAEINQLTIQVNDLRG 151
>Z30215-7|CAA82940.1| 322|Caenorhabditis elegans Hypothetical
protein K03H1.10 protein.
Length = 322
Score = 27.5 bits (58), Expect = 7.9
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +3
Query: 231 KNTSKVGKKTNEEIFAGFQTLRNEQRQLGSKISELQMELNEHK 359
K+ + +K +E+F +N L KI E+Q EL E K
Sbjct: 202 KDLNAYARKVEKEVFETAIDRKNYYHLLAEKIYEIQKELQEKK 244
>Z29560-13|CAA82665.1| 322|Caenorhabditis elegans Hypothetical
protein K03H1.10 protein.
Length = 322
Score = 27.5 bits (58), Expect = 7.9
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +3
Query: 231 KNTSKVGKKTNEEIFAGFQTLRNEQRQLGSKISELQMELNEHK 359
K+ + +K +E+F +N L KI E+Q EL E K
Sbjct: 202 KDLNAYARKVEKEVFETAIDRKNYYHLLAEKIYEIQKELQEKK 244
>U58728-1|AAB00588.1| 430|Caenorhabditis elegans Temporarily
assigned gene nameprotein 294 protein.
Length = 430
Score = 27.5 bits (58), Expect = 7.9
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -1
Query: 410 PETLTGQLHSPQSLNYDLMFV 348
PE + +L+ P SLNYDL+ V
Sbjct: 298 PERIVKKLNQPSSLNYDLLKV 318
>AB107359-1|BAD89380.1| 260|Caenorhabditis elegans troponin I 3
protein.
Length = 260
Score = 27.5 bits (58), Expect = 7.9
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +3
Query: 255 KTNEEIFAGFQTLRNEQRQLGSKISELQMELNEHKIVIETLRG 383
K E++FA L E+ + +S+ + E+N+ I + LRG
Sbjct: 109 KIYEDMFARVCALEEEKFDINFGVSQTEAEINQLTIQVNDLRG 151
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,980,138
Number of Sequences: 27780
Number of extensions: 264693
Number of successful extensions: 875
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 840
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 874
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1311096392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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