Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12h12r
         (726 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK124803-1|BAC85953.1|  180|Homo sapiens protein ( Homo sapiens ...    31   4.2  
U37283-1|AAA96752.1|  173|Homo sapiens microfibril-associated gl...    30   9.7  
BC005901-1|AAH05901.1|  173|Homo sapiens MFAP5 protein protein.        30   9.7  
AY339060-1|AAQ18021.1|  163|Homo sapiens microfibril-associated ...    30   9.7  
AF084927-1|AAC83942.1|  173|Homo sapiens microfibril-associated ...    30   9.7  

>AK124803-1|BAC85953.1|  180|Homo sapiens protein ( Homo sapiens
           cDNA FLJ42813 fis, clone BRCAN2012355. ).
          Length = 180

 Score = 31.1 bits (67), Expect = 4.2
 Identities = 17/55 (30%), Positives = 24/55 (43%)
 Frame = +2

Query: 2   CIQITVYKAQIAISNFTCSHNYSIMYLLRQCIHNVCIGNTKIILH*KILYDINYI 166
           C+ I +Y   I +  +TC   Y  MY L  C +        I +H  I+Y   YI
Sbjct: 110 CVHINMY-VSIYVYIYTCIQIYIYMYTLYVCTYTYMCTYIHICIHTSIIYVCVYI 163


>U37283-1|AAA96752.1|  173|Homo sapiens microfibril-associated
           glycoprotein-2 MAGP-2 protein.
          Length = 173

 Score = 29.9 bits (64), Expect = 9.7
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +2

Query: 47  FTCSHNYSIMYLLRQCIHNVC 109
           FTC+  YS+   ++QCIH +C
Sbjct: 89  FTCTRLYSVHRPVKQCIHQLC 109


>BC005901-1|AAH05901.1|  173|Homo sapiens MFAP5 protein protein.
          Length = 173

 Score = 29.9 bits (64), Expect = 9.7
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +2

Query: 47  FTCSHNYSIMYLLRQCIHNVC 109
           FTC+  YS+   ++QCIH +C
Sbjct: 89  FTCTRLYSVHRPVKQCIHQLC 109


>AY339060-1|AAQ18021.1|  163|Homo sapiens microfibril-associated
           glycoprotein 2 protein.
          Length = 163

 Score = 29.9 bits (64), Expect = 9.7
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +2

Query: 47  FTCSHNYSIMYLLRQCIHNVC 109
           FTC+  YS+   ++QCIH +C
Sbjct: 79  FTCTRLYSVHRPVKQCIHQLC 99


>AF084927-1|AAC83942.1|  173|Homo sapiens microfibril-associated
           glycoprotein 2 protein.
          Length = 173

 Score = 29.9 bits (64), Expect = 9.7
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +2

Query: 47  FTCSHNYSIMYLLRQCIHNVC 109
           FTC+  YS+   ++QCIH +C
Sbjct: 89  FTCTRLYSVHRPVKQCIHQLC 109


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,637,081
Number of Sequences: 237096
Number of extensions: 1761270
Number of successful extensions: 2186
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2139
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2186
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8567175942
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)