Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12h09r
(714 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0034 + 318432-318825,318902-319851 132 2e-31
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 132 3e-31
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 131 5e-31
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 131 5e-31
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 130 8e-31
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 130 8e-31
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 130 1e-30
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 126 1e-29
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 69 4e-12
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 69 5e-12
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 68 6e-12
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 67 1e-11
02_05_1127 + 34292894-34293284,34293948-34295443 29 2.8
03_02_0943 + 12598616-12598789,12599790-12601250 29 4.8
02_04_0447 + 22998353-22999033,22999665-22999831,22999965-23000622 29 4.8
02_05_1298 - 35542250-35542831,35543218-35543410,35543511-355438... 28 6.4
02_02_0647 - 12613356-12614040,12615034-12615219,12617168-12617475 28 6.4
04_04_0238 + 23839763-23840251,23841389-23841555,23841632-23842280 28 8.5
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 132 bits (320), Expect = 2e-31
Identities = 59/64 (92%), Positives = 64/64 (100%)
Frame = -2
Query: 713 KMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSE 534
KMA+TFIGNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSE
Sbjct: 362 KMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSE 421
Query: 533 YQQY 522
YQQY
Sbjct: 422 YQQY 425
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 132 bits (319), Expect = 3e-31
Identities = 58/64 (90%), Positives = 64/64 (100%)
Frame = -2
Query: 713 KMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSE 534
KMAATF+GNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV+E
Sbjct: 362 KMAATFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAE 421
Query: 533 YQQY 522
YQQY
Sbjct: 422 YQQY 425
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 131 bits (317), Expect = 5e-31
Identities = 58/64 (90%), Positives = 64/64 (100%)
Frame = -2
Query: 713 KMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSE 534
KMA+TFIGNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV+E
Sbjct: 362 KMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAE 421
Query: 533 YQQY 522
YQQY
Sbjct: 422 YQQY 425
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 131 bits (317), Expect = 5e-31
Identities = 58/64 (90%), Positives = 64/64 (100%)
Frame = -2
Query: 713 KMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSE 534
KMA+TFIGNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV+E
Sbjct: 362 KMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAE 421
Query: 533 YQQY 522
YQQY
Sbjct: 422 YQQY 425
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 130 bits (315), Expect = 8e-31
Identities = 58/63 (92%), Positives = 63/63 (100%)
Frame = -2
Query: 710 MAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 531
MA+TFIGNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY
Sbjct: 384 MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 443
Query: 530 QQY 522
QQY
Sbjct: 444 QQY 446
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 130 bits (315), Expect = 8e-31
Identities = 58/63 (92%), Positives = 63/63 (100%)
Frame = -2
Query: 710 MAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 531
MA+TFIGNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY
Sbjct: 363 MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 422
Query: 530 QQY 522
QQY
Sbjct: 423 QQY 425
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 130 bits (314), Expect = 1e-30
Identities = 57/63 (90%), Positives = 63/63 (100%)
Frame = -2
Query: 710 MAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 531
MA+TF+GNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY
Sbjct: 543 MASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 602
Query: 530 QQY 522
QQY
Sbjct: 603 QQY 605
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 126 bits (305), Expect = 1e-29
Identities = 55/63 (87%), Positives = 62/63 (98%)
Frame = -2
Query: 710 MAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 531
MA+TF+GNST+IQE+F+R+SEQFTAMFRRKAFLHWYT EGMDEMEFTEAESNMNDLV+EY
Sbjct: 379 MASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTSEGMDEMEFTEAESNMNDLVAEY 438
Query: 530 QQY 522
QQY
Sbjct: 439 QQY 441
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 68.9 bits (161), Expect = 4e-12
Identities = 27/63 (42%), Positives = 43/63 (68%)
Frame = -2
Query: 713 KMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSE 534
+ A I N+TA+ E+F RI +F M+ ++AF+HWY GEGM+E EF+EA ++ L +
Sbjct: 453 RRAVCMISNNTAVAEVFSRIDRKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKD 512
Query: 533 YQQ 525
Y++
Sbjct: 513 YEE 515
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 68.5 bits (160), Expect = 5e-12
Identities = 27/61 (44%), Positives = 42/61 (68%)
Frame = -2
Query: 707 AATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ 528
A I N+TA+ E+F RI +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y+
Sbjct: 374 AVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYE 433
Query: 527 Q 525
+
Sbjct: 434 E 434
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 68.1 bits (159), Expect = 6e-12
Identities = 27/61 (44%), Positives = 42/61 (68%)
Frame = -2
Query: 707 AATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ 528
A I NST++ E+F RI +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y+
Sbjct: 374 AVCMISNSTSVVEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYE 433
Query: 527 Q 525
+
Sbjct: 434 E 434
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 66.9 bits (156), Expect = 1e-11
Identities = 27/61 (44%), Positives = 42/61 (68%)
Frame = -2
Query: 707 AATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ 528
A I NST++ E+F RI +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y+
Sbjct: 374 AVCMISNSTSVVEVFSRIDIKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYE 433
Query: 527 Q 525
+
Sbjct: 434 E 434
>02_05_1127 + 34292894-34293284,34293948-34295443
Length = 628
Score = 29.5 bits (63), Expect = 2.8
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2
Query: 485 RQTLRPRRRWPPGTVGTRRQG 547
R T +P+RRWPPG+ G +G
Sbjct: 83 RATGQPKRRWPPGSSGGGARG 103
>03_02_0943 + 12598616-12598789,12599790-12601250
Length = 544
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = -3
Query: 274 ICSIHSLIFHQASLRARSEICKG*SKIDTFYLHMCSRNKMADQNS 140
+ I +L+ ++S S +C G + Y +CS+ + AD+NS
Sbjct: 309 LAEIKALLSSESSSECGSSVCDGVTLSAEEYFTLCSKAQEADENS 353
>02_04_0447 + 22998353-22999033,22999665-22999831,22999965-23000622
Length = 501
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 538 ETRSFMLLSASVNSISSMPSPVYQCKKALRLNIAVNCSEMR 660
E RS LL A N + +P+ + + LN++ N S+MR
Sbjct: 328 EMRSLRLLDAHFNQLRGLPAGIGRLAALESLNLSSNFSDMR 368
>02_05_1298 -
35542250-35542831,35543218-35543410,35543511-35543827,
35544144-35544186,35545845-35545900,35546028-35546102,
35546249-35546345,35546422-35546546,35547063-35547167,
35547295-35547432,35547758-35547831,35547995-35548065,
35548168-35548363,35548482-35548572,35549264-35549342,
35549431-35549491,35549745-35549814,35549913-35549987,
35550119-35550194,35550403-35550489,35550744-35550880,
35551000-35551063,35551351-35551415
Length = 958
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +1
Query: 559 LSASVNSISSMPSPVYQCKKALRLNIAVN 645
L+AS N+IS +P + C K RLN+ N
Sbjct: 142 LNASNNTISVLPDELAGCSKLFRLNLEGN 170
>02_02_0647 - 12613356-12614040,12615034-12615219,12617168-12617475
Length = 392
Score = 28.3 bits (60), Expect = 6.4
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = +1
Query: 529 WYSETRSFMLLSASVNSISS---MPSPVYQCKKALRLNIAVNCSEMRL 663
W T+ ++ L+ +V + SS M P+ C K+LRL + SE L
Sbjct: 138 WTMRTKQYLELAVAVLASSSSGDMMIPITSCLKSLRLRDCIKISEKGL 185
>04_04_0238 + 23839763-23840251,23841389-23841555,23841632-23842280
Length = 434
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +1
Query: 538 ETRSFMLLSASVNSISSMPSPVYQCKKALRLNIAVNCSEMR 660
E RS LL A N + +PS + + LN++ N S+++
Sbjct: 264 EMRSLYLLDAHFNELCGLPSAIGKLSSLEILNLSSNFSDLK 304
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,737,471
Number of Sequences: 37544
Number of extensions: 303690
Number of successful extensions: 814
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 797
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 813
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1851002996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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