Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12h02f
(630 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D26067-1|BAA05062.1| 335|Homo sapiens KIAA0033 protein. 128 1e-29
BC091524-1|AAH91524.1| 291|Homo sapiens transmembrane protein 4... 128 1e-29
BC019884-1|AAH19884.1| 264|Homo sapiens transmembrane protein 4... 77 7e-14
BC008043-1|AAH08043.1| 264|Homo sapiens transmembrane protein 4... 77 7e-14
AY358547-1|AAQ88911.1| 264|Homo sapiens RPLL168 protein. 77 7e-14
BC044597-1|AAH44597.1| 192|Homo sapiens TMEM41B protein protein. 50 9e-06
BC035034-1|AAH35034.1| 192|Homo sapiens TMEM41B protein protein. 50 9e-06
AK172748-1|BAD18735.1| 132|Homo sapiens protein ( Homo sapiens ... 33 0.63
>D26067-1|BAA05062.1| 335|Homo sapiens KIAA0033 protein.
Length = 335
Score = 128 bits (310), Expect = 1e-29
Identities = 60/110 (54%), Positives = 74/110 (67%)
Frame = +3
Query: 300 YRQFPXXXXXXXXXXXXPWDLEDAKQLGLVLDRYKDRYFYEVLFGVFLVYIFLQTFAIPG 479
Y+ FP P D++DAK LG VL +YKD ++ +VL F YIFLQTFAIPG
Sbjct: 116 YKNFPQLSEEERVNMKVPRDMDDAKALGKVLSKYKDTFYVQVLVAYFATYIFLQTFAIPG 175
Query: 480 SIFLSILSGFLFPFYFALVLVCCCSAIGASLCFFLSNLLGKKLVRKFFPE 629
SIFLSILSGFL+PF AL LVC CS +GAS C+ LS L+G+ +V K+ E
Sbjct: 176 SIFLSILSGFLYPFPLALFLVCLCSGLGASFCYMLSYLVGRPVVYKYLTE 225
>BC091524-1|AAH91524.1| 291|Homo sapiens transmembrane protein 41B
protein.
Length = 291
Score = 128 bits (310), Expect = 1e-29
Identities = 60/110 (54%), Positives = 74/110 (67%)
Frame = +3
Query: 300 YRQFPXXXXXXXXXXXXPWDLEDAKQLGLVLDRYKDRYFYEVLFGVFLVYIFLQTFAIPG 479
Y+ FP P D++DAK LG VL +YKD ++ +VL F YIFLQTFAIPG
Sbjct: 72 YKNFPQLSEEERVNMKVPRDMDDAKALGKVLSKYKDTFYVQVLVAYFATYIFLQTFAIPG 131
Query: 480 SIFLSILSGFLFPFYFALVLVCCCSAIGASLCFFLSNLLGKKLVRKFFPE 629
SIFLSILSGFL+PF AL LVC CS +GAS C+ LS L+G+ +V K+ E
Sbjct: 132 SIFLSILSGFLYPFPLALFLVCLCSGLGASFCYMLSYLVGRPVVYKYLTE 181
>BC019884-1|AAH19884.1| 264|Homo sapiens transmembrane protein 41A
protein.
Length = 264
Score = 76.6 bits (180), Expect = 7e-14
Identities = 36/93 (38%), Positives = 58/93 (62%)
Frame = +3
Query: 351 PWDLEDAKQLGLVLDRYKDRYFYEVLFGVFLVYIFLQTFAIPGSIFLSILSGFLFPFYFA 530
P DL + ++L VL Y+ + V Y++ Q FAIPGS FL++L+G LF +
Sbjct: 45 PSDLAELRELSEVLREYRKEHQAYVFLLFCGAYLYKQGFAIPGSSFLNVLAGALFGPWLG 104
Query: 531 LVLVCCCSAIGASLCFFLSNLLGKKLVRKFFPE 629
L+L C +++GA+ C+ LS++ GK+LV +FP+
Sbjct: 105 LLLCCVLTSVGATCCYLLSSIFGKQLVVSYFPD 137
>BC008043-1|AAH08043.1| 264|Homo sapiens transmembrane protein 41A
protein.
Length = 264
Score = 76.6 bits (180), Expect = 7e-14
Identities = 36/93 (38%), Positives = 58/93 (62%)
Frame = +3
Query: 351 PWDLEDAKQLGLVLDRYKDRYFYEVLFGVFLVYIFLQTFAIPGSIFLSILSGFLFPFYFA 530
P DL + ++L VL Y+ + V Y++ Q FAIPGS FL++L+G LF +
Sbjct: 45 PSDLAELRELSEVLREYRKEHQAYVFLLFCGAYLYKQGFAIPGSSFLNVLAGALFGPWLG 104
Query: 531 LVLVCCCSAIGASLCFFLSNLLGKKLVRKFFPE 629
L+L C +++GA+ C+ LS++ GK+LV +FP+
Sbjct: 105 LLLCCVLTSVGATCCYLLSSIFGKQLVVSYFPD 137
>AY358547-1|AAQ88911.1| 264|Homo sapiens RPLL168 protein.
Length = 264
Score = 76.6 bits (180), Expect = 7e-14
Identities = 36/93 (38%), Positives = 58/93 (62%)
Frame = +3
Query: 351 PWDLEDAKQLGLVLDRYKDRYFYEVLFGVFLVYIFLQTFAIPGSIFLSILSGFLFPFYFA 530
P DL + ++L VL Y+ + V Y++ Q FAIPGS FL++L+G LF +
Sbjct: 45 PSDLAELRELSEVLREYRKEHQAYVFLLFCGAYLYKQGFAIPGSSFLNVLAGALFGPWLG 104
Query: 531 LVLVCCCSAIGASLCFFLSNLLGKKLVRKFFPE 629
L+L C +++GA+ C+ LS++ GK+LV +FP+
Sbjct: 105 LLLCCVLTSVGATCCYLLSSIFGKQLVVSYFPD 137
>BC044597-1|AAH44597.1| 192|Homo sapiens TMEM41B protein protein.
Length = 192
Score = 49.6 bits (113), Expect = 9e-06
Identities = 22/54 (40%), Positives = 29/54 (53%)
Frame = +3
Query: 300 YRQFPXXXXXXXXXXXXPWDLEDAKQLGLVLDRYKDRYFYEVLFGVFLVYIFLQ 461
Y+ FP P D++DAK LG VL +YKD ++ +VL F YIF Q
Sbjct: 72 YKNFPQLSEEERVNMKVPRDMDDAKALGKVLSKYKDTFYVQVLVAYFATYIFYQ 125
Score = 41.5 bits (93), Expect = 0.002
Identities = 20/54 (37%), Positives = 28/54 (51%)
Frame = +2
Query: 458 ANICNTWIYIFKYTFRVSFSFLFRTGISLLLFGNWCKSMFLLVKSSWKEAC*KI 619
ANIC + +YI +YT RVS S L +F WC + SW+ +C +I
Sbjct: 127 ANICYSRLYISQYTLRVSLSLSTSLISCLFVFWTWCLFLLYAFLFSWETSCIQI 180
>BC035034-1|AAH35034.1| 192|Homo sapiens TMEM41B protein protein.
Length = 192
Score = 49.6 bits (113), Expect = 9e-06
Identities = 22/54 (40%), Positives = 29/54 (53%)
Frame = +3
Query: 300 YRQFPXXXXXXXXXXXXPWDLEDAKQLGLVLDRYKDRYFYEVLFGVFLVYIFLQ 461
Y+ FP P D++DAK LG VL +YKD ++ +VL F YIF Q
Sbjct: 72 YKNFPQLSEEERVNMKVPRDMDDAKALGKVLSKYKDTFYVQVLVAYFATYIFYQ 125
Score = 41.5 bits (93), Expect = 0.002
Identities = 20/54 (37%), Positives = 28/54 (51%)
Frame = +2
Query: 458 ANICNTWIYIFKYTFRVSFSFLFRTGISLLLFGNWCKSMFLLVKSSWKEAC*KI 619
ANIC + +YI +YT RVS S L +F WC + SW+ +C +I
Sbjct: 127 ANICYSRLYISQYTLRVSLSLSTSLISCLFVFWTWCLFLLYAFLFSWETSCIQI 180
>AK172748-1|BAD18735.1| 132|Homo sapiens protein ( Homo sapiens
cDNA FLJ23909 fis, clone ADSU01856. ).
Length = 132
Score = 33.5 bits (73), Expect = 0.63
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = +3
Query: 351 PWDLEDAKQLGLVLDRYKDRYFYEVLFGVFLVYIFLQTFAIPGSIFL 491
P DL + ++L VL Y+ + V Y++ Q FAIPGS FL
Sbjct: 45 PSDLAELRELSEVLREYRKEHQAYVFLLFCGAYLYKQGFAIPGSSFL 91
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,884,307
Number of Sequences: 237096
Number of extensions: 1149635
Number of successful extensions: 5626
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5581
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5624
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6860268620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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