Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12h01r
(760 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme Hus5|Schizosacch... 137 1e-33
SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enz... 77 3e-15
SPBC119.02 |ubc4||ubiquitin conjugating enzyme Ubc4|Schizosaccha... 75 1e-14
SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2... 71 2e-13
SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme Ubc3|Schizo... 68 2e-12
SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme Ubc13|Sch... 67 2e-12
SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme Ubc1|Schizosacch... 65 1e-11
SPBC1105.09 |ubc15||ubiquitin conjugating enzyme Ubc15|Schizosac... 64 2e-11
SPCC777.10c |ubc12||ubiquitin conjugating enzyme Ubc12|Schizosac... 64 3e-11
SPAC1250.03 |ubc14||ubiquitin conjugating enzyme Ubc14|Schizosac... 63 4e-11
SPBC1198.09 |ubc16||ubiquitin conjugating enzyme Ubc16|Schizosac... 46 4e-06
SPBC211.07c |ubc8||ubiquitin conjugating enzyme Ubc8|Schizosacch... 41 2e-04
>SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme
Hus5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 157
Score = 137 bits (332), Expect = 1e-33
Identities = 56/83 (67%), Positives = 73/83 (87%)
Frame = -3
Query: 758 FXXDYPSSPPKCKFEPPLXHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEP 579
F +YP+ PPKC+F PPL HPNVYPSGTVCLS+L+EE+ W+PAITIKQILLGIQDLL++P
Sbjct: 64 FPEEYPTRPPKCRFTPPLFHPNVYPSGTVCLSILNEEEGWKPAITIKQILLGIQDLLDDP 123
Query: 578 NVKDPAQAEAYTIYCQNRLEYDK 510
N+ PAQ EAYT++ ++++EY+K
Sbjct: 124 NIASPAQTEAYTMFKKDKVEYEK 146
>SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enzyme
E2 Rhp6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 151
Score = 77.0 bits (181), Expect = 3e-15
Identities = 35/81 (43%), Positives = 46/81 (56%)
Frame = -3
Query: 758 FXXDYPSSPPKCKFEPPLXHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEP 579
F YP+ PP KF + HPNVY +G +CL +L W P + IL IQ LLN+P
Sbjct: 59 FDEQYPNKPPLVKFVSTMFHPNVYANGELCLDILQNR--WSPTYDVAAILTSIQSLLNDP 116
Query: 578 NVKDPAQAEAYTIYCQNRLEY 516
N PA AEA ++ +N+ EY
Sbjct: 117 NNASPANAEAAQLHRENKKEY 137
>SPBC119.02 |ubc4||ubiquitin conjugating enzyme
Ubc4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 147
Score = 74.9 bits (176), Expect = 1e-14
Identities = 33/82 (40%), Positives = 48/82 (58%)
Frame = -3
Query: 758 FXXDYPSSPPKCKFEPPLXHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEP 579
F DYP PPK F + HPN+ +G++CL +L ++ W PA+TI ++LL I LL +P
Sbjct: 56 FPTDYPFKPPKVNFTTRIYHPNINSNGSICLDILRDQ--WSPALTISKVLLSICSLLTDP 113
Query: 578 NVKDPAQAEAYTIYCQNRLEYD 513
N DP E +Y +R Y+
Sbjct: 114 NPDDPLVPEIAHVYKTDRSRYE 135
>SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2-C
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 176
Score = 70.9 bits (166), Expect = 2e-13
Identities = 32/83 (38%), Positives = 48/83 (57%)
Frame = -3
Query: 758 FXXDYPSSPPKCKFEPPLXHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEP 579
F +YP SPP F P+ HPNV SG +CL +L ++ W ++ ILL +Q LL EP
Sbjct: 84 FPANYPYSPPTIIFTSPMWHPNVDMSGNICLDILKDK--WSAVYNVQTILLSLQSLLGEP 141
Query: 578 NVKDPAQAEAYTIYCQNRLEYDK 510
N P A+A ++ ++ +EY +
Sbjct: 142 NNASPLNAQAAELWSKDPIEYKR 164
>SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme
Ubc3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 166
Score = 67.7 bits (158), Expect = 2e-12
Identities = 35/92 (38%), Positives = 49/92 (53%), Gaps = 11/92 (11%)
Frame = -3
Query: 758 FXXDYPSSPPKCKFEPPLXHPNVYPSGTVCLSLLDEEKD-----------WRPAITIKQI 612
F DYP PP KFE HPNVY GTVC+S+L D W P ++++I
Sbjct: 61 FPSDYPLGPPTLKFECEFFHPNVYKDGTVCISILHAPGDDPNMYESSSERWSPVQSVEKI 120
Query: 611 LLGIQDLLNEPNVKDPAQAEAYTIYCQNRLEY 516
LL + +L EPN + A +A ++ ++R EY
Sbjct: 121 LLSVMSMLAEPNDESGANIDACKMWREDREEY 152
>SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme
Ubc13|Schizosaccharomyces pombe|chr 1|||Manual
Length = 148
Score = 67.3 bits (157), Expect = 2e-12
Identities = 31/74 (41%), Positives = 43/74 (58%)
Frame = -3
Query: 749 DYPSSPPKCKFEPPLXHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEPNVK 570
+YP PP +F + HPNV G +CLS L +KDW PA+ I+ +LL IQ L+ PN
Sbjct: 60 EYPMMPPNVRFLTKIYHPNVDKLGRICLSTL--KKDWSPALQIRTVLLSIQALMGAPNPD 117
Query: 569 DPAQAEAYTIYCQN 528
DP + I+ +N
Sbjct: 118 DPLDNDVAKIWKEN 131
>SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme
Ubc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 217
Score = 64.9 bits (151), Expect = 1e-11
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Frame = -3
Query: 749 DYPSSPPKCKFEPPLXHPNV-YPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEPNV 573
DYP PPK F+ + HPNV +G +CL +L ++ W P T+K L+ +Q LL P
Sbjct: 62 DYPFRPPKMNFDTKIYHPNVSSQTGAICLDILKDQ--WSPVYTMKSALISLQSLLCTPEP 119
Query: 572 KDPAQAEAYTIYCQNRLEY 516
+P A+ +Y QN ++
Sbjct: 120 SNPQDAQVAQVYLQNYQQF 138
>SPBC1105.09 |ubc15||ubiquitin conjugating enzyme
Ubc15|Schizosaccharomyces pombe|chr 2|||Manual
Length = 167
Score = 64.1 bits (149), Expect = 2e-11
Identities = 33/94 (35%), Positives = 50/94 (53%), Gaps = 11/94 (11%)
Frame = -3
Query: 758 FXXDYPSSPPKCKFEPPLXHPNVYPSGTVCLSLL-----------DEEKDWRPAITIKQI 612
F DYP PPK KF + HPNV+P+G VC+S+L D + W P + + I
Sbjct: 61 FPQDYPLMPPKMKFTTEIWHPNVHPNGEVCISILHPPGDDKYGYEDAGERWLPVHSPETI 120
Query: 611 LLGIQDLLNEPNVKDPAQAEAYTIYCQNRLEYDK 510
L+ + +L+ PN + PA +A + +N E+ K
Sbjct: 121 LISVISMLSSPNDESPANIDAAKEFRENPQEFKK 154
>SPCC777.10c |ubc12||ubiquitin conjugating enzyme
Ubc12|Schizosaccharomyces pombe|chr 3|||Manual
Length = 177
Score = 63.7 bits (148), Expect = 3e-11
Identities = 28/67 (41%), Positives = 39/67 (58%)
Frame = -3
Query: 749 DYPSSPPKCKFEPPLXHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEPNVK 570
+YP PPK K + HPN+ G VCL++L +DW P + + IL+G+Q L PN +
Sbjct: 79 NYPHDPPKVKCLNKIYHPNIDIEGNVCLNIL--RQDWNPVLNLNSILVGLQFLFLSPNAE 136
Query: 569 DPAQAEA 549
DP EA
Sbjct: 137 DPLNKEA 143
>SPAC1250.03 |ubc14||ubiquitin conjugating enzyme
Ubc14|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 63.3 bits (147), Expect = 4e-11
Identities = 31/83 (37%), Positives = 46/83 (55%)
Frame = -3
Query: 758 FXXDYPSSPPKCKFEPPLXHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEP 579
F DYP PP +F + HPN G VCL++L +++ ++P+I ++ +L I LL EP
Sbjct: 62 FPLDYPFQPPTIEFTTRIYHPNFDSEGNVCLAIL-KQQVFKPSIKLRSVLEQILQLLREP 120
Query: 578 NVKDPAQAEAYTIYCQNRLEYDK 510
N DP A Y +R +DK
Sbjct: 121 NPDDPLVASIAEQYRNDRPSFDK 143
>SPBC1198.09 |ubc16||ubiquitin conjugating enzyme
Ubc16|Schizosaccharomyces pombe|chr 2|||Manual
Length = 160
Score = 46.4 bits (105), Expect = 4e-06
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = -3
Query: 746 YPSSPPKCKFEPPLXHPNV-YPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEPNVK 570
YP SPP F+ + HPN+ + +G VC+ +L + W PA +++ L I LL+ +
Sbjct: 64 YPISPPSVYFQTKIVHPNISWTNGEVCMDIL--KTHWSPAWSLQSACLAIISLLSNYDAS 121
Query: 569 DPAQAEA 549
P +A
Sbjct: 122 SPLNVDA 128
>SPBC211.07c |ubc8||ubiquitin conjugating enzyme
Ubc8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 40.7 bits (91), Expect = 2e-04
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = -3
Query: 749 DYPSSPPKCKFEPPLXHPNVYP-SGTVCLSLLDEEKDWRPAITIKQIL-LGIQDLLNEPN 576
+YP P F + HPN+ SG+VCL ++++ W P + I + + LL PN
Sbjct: 58 EYPWKSPSIGFVNRIFHPNIDELSGSVCLDVINQ--TWSPMFDMINIFEVFLPQLLRYPN 115
Query: 575 VKDPAQAEA 549
DP EA
Sbjct: 116 ASDPLNGEA 124
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,982,483
Number of Sequences: 5004
Number of extensions: 58252
Number of successful extensions: 154
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 141
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 145
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 363302114
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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