Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12h01f
         (616 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   3.6  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    22   4.7  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    21   6.2  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    21   8.2  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    21   8.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.2  

>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -1

Query: 265 RQNQRDGPYAKLSVLQLNVHLLSLTFSTK 179
           R  + D P+AKL    L+ H++++   TK
Sbjct: 196 RVPEEDNPHAKLYDYDLSSHVITILDWTK 224


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +2

Query: 398 QVLQNANLNHHCSTPMCIHQV 460
           Q +++ N  +H   P CIH++
Sbjct: 342 QYVRHKNTPYHTPEPDCIHEL 362


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 10/40 (25%), Positives = 16/40 (40%)
 Frame = -1

Query: 247 GPYAKLSVLQLNVHLLSLTFSTKITRFMSRASIKGYS*CW 128
           G + +  VL +   LLS+ FS           ++    CW
Sbjct: 156 GSWKRARVLVMLAWLLSILFSLPTVFLFEEKQVQSMPQCW 195


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 13/44 (29%), Positives = 18/44 (40%)
 Frame = -1

Query: 247 GPYAKLSVLQLNVHLLSLTFSTKITRFMSRASIKGYS*CWAIDF 116
           G + +   L L     S  +S  I  F     +KG   CW I+F
Sbjct: 134 GSWKRARYLILAAWFFSALYSLPILIFYEEKIVKGKLQCW-IEF 176


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -1

Query: 448 THWGGTVVVQICI 410
           T W GT   Q+CI
Sbjct: 117 TCWNGTATEQLCI 129


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -3

Query: 266  ATKPKGWSLRQAFRSSAK 213
            A KPKGW L  A   S +
Sbjct: 1975 AFKPKGWLLSAAVSPSRR 1992


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,382
Number of Sequences: 336
Number of extensions: 3402
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15666150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)