Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12g22r
         (742 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50301-8|AAB37049.1|  339|Caenorhabditis elegans Serpin protein ...    46   4e-05
AY525080-1|AAS13529.1|  362|Caenorhabditis elegans serine or cys...    45   5e-05
AC087794-5|AAM48555.1|  362|Caenorhabditis elegans Serpin protei...    45   5e-05
AY525079-1|AAS13528.1|  359|Caenorhabditis elegans serine or cys...    44   1e-04
AF026209-15|AAB71270.1|  359|Caenorhabditis elegans Serpin prote...    44   1e-04
Z75543-10|CAA99875.2|  279|Caenorhabditis elegans Hypothetical p...    31   0.86 
AY728059-1|AAU43720.1|  279|Caenorhabditis elegans cadmium-induc...    31   0.86 
Z83222-2|CAB54214.2|  211|Caenorhabditis elegans Hypothetical pr...    30   2.0  
Z81077-3|CAB03067.1|  527|Caenorhabditis elegans Hypothetical pr...    28   8.0  

>U50301-8|AAB37049.1|  339|Caenorhabditis elegans Serpin protein 8
           protein.
          Length = 339

 Score = 45.6 bits (103), Expect = 4e-05
 Identities = 43/174 (24%), Positives = 79/174 (45%), Gaps = 5/174 (2%)
 Frame = -2

Query: 732 LILTNVISFKGLWGLPFNKSDTELEPFY---NEDRLVIGSVNMMYQKGQFPFSNLKKLKA 562
           ++  +   F+  W   F+K  T  + F+   N  R    ++  ++  G       +  K 
Sbjct: 157 VVFLSAACFEAQWQNKFHKLSTSKKEFFCTANSHR----NIKFLHATGANR-KYCENDKF 211

Query: 561 FVLELPYGTDGKYSMLVILPHPRTKIADMYKNFADVNLKDVFKQLQKDVDDFGLEDVDVK 382
            VL LPY TD  + M + LP  +  +A+  K      +++    L+ +V ++    V+V+
Sbjct: 212 QVLSLPY-TDSSFEMTIFLPKEQFGLAEALKTLGTSTIQE----LKSNVSNYL---VNVQ 263

Query: 381 LPRFQISTNVVLNKPLNDMGVYDIFQPD--LANFQRITKENIFVSAIVHKADIE 226
           +P ++  T + LN  L  +G+  I      + NF     EN+ +S  +HKA IE
Sbjct: 264 IPIWRNETEIDLNSTLQAIGITKILNESAYIGNFA----ENVHISEFIHKAIIE 313


>AY525080-1|AAS13529.1|  362|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 362

 Score = 45.2 bits (102), Expect = 5e-05
 Identities = 33/111 (29%), Positives = 54/111 (48%)
 Frame = -2

Query: 558 VLELPYGTDGKYSMLVILPHPRTKIADMYKNFADVNLKDVFKQLQKDVDDFGLEDVDVKL 379
           VL + Y +D +Y   V LP  R  + +  K   +    D+ K  ++         ++ +L
Sbjct: 209 VLHVAY-SDQRYQFSVFLPKLRNSLKEALKKLNEKRFNDLLKTKKRTF-------MNTQL 260

Query: 378 PRFQISTNVVLNKPLNDMGVYDIFQPDLANFQRITKENIFVSAIVHKADIE 226
           P+F I  ++ L   L  +G+ DIF  D A+   +  EN+ +S  VHKA IE
Sbjct: 261 PKFTIEKDLNLKSHLQTLGITDIFS-DSADLSGLA-ENLKISEGVHKAIIE 309


>AC087794-5|AAM48555.1|  362|Caenorhabditis elegans Serpin protein 3
           protein.
          Length = 362

 Score = 45.2 bits (102), Expect = 5e-05
 Identities = 33/111 (29%), Positives = 54/111 (48%)
 Frame = -2

Query: 558 VLELPYGTDGKYSMLVILPHPRTKIADMYKNFADVNLKDVFKQLQKDVDDFGLEDVDVKL 379
           VL + Y +D +Y   V LP  R  + +  K   +    D+ K  ++         ++ +L
Sbjct: 209 VLHVAY-SDQRYQFSVFLPKLRNSLKEALKKLNEKRFNDLLKTKKRTF-------MNTQL 260

Query: 378 PRFQISTNVVLNKPLNDMGVYDIFQPDLANFQRITKENIFVSAIVHKADIE 226
           P+F I  ++ L   L  +G+ DIF  D A+   +  EN+ +S  VHKA IE
Sbjct: 261 PKFTIEKDLNLKSHLQTLGITDIFS-DSADLSGLA-ENLKISEGVHKAIIE 309


>AY525079-1|AAS13528.1|  359|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 359

 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 41/168 (24%), Positives = 75/168 (44%), Gaps = 1/168 (0%)
 Frame = -2

Query: 726 LTNVISFKGLWGLPFNKSDTELEPFYNEDRLVIGSVNMMYQKGQFPFSNLKKLKAF-VLE 550
           L N + FK  W   F K  T    F+  +     S  + +        +  +   F VL 
Sbjct: 153 LVNAMYFKADWQSKFAKESTTGREFFTSEA---ESRQIPFLTDVDEHRDYTEDVLFQVLS 209

Query: 549 LPYGTDGKYSMLVILPHPRTKIADMYKNFADVNLKDVFKQLQKDVDDFGLEDVDVKLPRF 370
           L Y  D K+++ + LP  R  + D  +      ++++   L+          V V++P+F
Sbjct: 210 LKYA-DPKFTLAIFLPKQRFGLVDALEKINGEYIQNLLNDLKSSY-------VSVQIPKF 261

Query: 369 QISTNVVLNKPLNDMGVYDIFQPDLANFQRITKENIFVSAIVHKADIE 226
           +I   + L + L  +G+ +IF  + A+   I  + +F+S+ +HKA IE
Sbjct: 262 KIEKELDLKETLEAIGIKEIF-AEGADLSGIA-DKVFISSGIHKAIIE 307


>AF026209-15|AAB71270.1|  359|Caenorhabditis elegans Serpin protein
           2 protein.
          Length = 359

 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 39/167 (23%), Positives = 75/167 (44%)
 Frame = -2

Query: 726 LTNVISFKGLWGLPFNKSDTELEPFYNEDRLVIGSVNMMYQKGQFPFSNLKKLKAFVLEL 547
           L N + FK  W   F K  T    F+  +      +  + +  +      + +   VL L
Sbjct: 153 LVNAMYFKADWQSKFAKESTTGREFFTSEA-ESRQIPFLTELDEHR-DYTEDVLFQVLSL 210

Query: 546 PYGTDGKYSMLVILPHPRTKIADMYKNFADVNLKDVFKQLQKDVDDFGLEDVDVKLPRFQ 367
            Y  D K+++ + LP  R  + D  +      ++++   L+          V V++P+F+
Sbjct: 211 KYA-DPKFTLAIFLPKQRFGLVDALEKINGEYIQNLLNDLKSSY-------VSVQIPKFK 262

Query: 366 ISTNVVLNKPLNDMGVYDIFQPDLANFQRITKENIFVSAIVHKADIE 226
           I   + L + L  +G+ +IF  + A+   I  + +F+S+ +HKA IE
Sbjct: 263 IEKELDLKETLEAIGIKEIF-AEGADLSGIA-DKVFISSGIHKAIIE 307


>Z75543-10|CAA99875.2|  279|Caenorhabditis elegans Hypothetical
           protein K01D12.14 protein.
          Length = 279

 Score = 31.1 bits (67), Expect = 0.86
 Identities = 10/25 (40%), Positives = 18/25 (72%)
 Frame = +2

Query: 233 SALCTMADTNIFSFVIRWKLAKSGW 307
           +ALC +AD ++ S +I++K A+  W
Sbjct: 133 TALCRLADNHLLSIIIKYKAAEDAW 157


>AY728059-1|AAU43720.1|  279|Caenorhabditis elegans
           cadmium-inducible lysosomal proteinCDR-5 protein.
          Length = 279

 Score = 31.1 bits (67), Expect = 0.86
 Identities = 10/25 (40%), Positives = 18/25 (72%)
 Frame = +2

Query: 233 SALCTMADTNIFSFVIRWKLAKSGW 307
           +ALC +AD ++ S +I++K A+  W
Sbjct: 133 TALCRLADNHLLSIIIKYKAAEDAW 157


>Z83222-2|CAB54214.2|  211|Caenorhabditis elegans Hypothetical
           protein E01B7.2 protein.
          Length = 211

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
 Frame = -1

Query: 637 TGNRQREHDV---PERTVPVLKPKEA*GLRTGTSLRHRRKVLDAGHTPAPENEDRRHVQE 467
           T +R   HD+   P+   P+L  K+   LR G +    RK++ A ++  PE E+R  + E
Sbjct: 148 TNDRFEIHDLNIEPQPIQPILAEKKRKQLRNGPN---NRKIVMARYSKRPETEERTMIIE 204

Query: 466 LRRCQSQ 446
           +   Q +
Sbjct: 205 MPNFQEK 211


>Z81077-3|CAB03067.1|  527|Caenorhabditis elegans Hypothetical
           protein F36A2.2 protein.
          Length = 527

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 16/61 (26%), Positives = 24/61 (39%)
 Frame = +1

Query: 100 SGGRFLHYEVNKGPICVECGRRNPIGKSXXXXXXXXCSRFRDLYISFMHYGRHEYILLCD 279
           SG R L  +  K P C  CG+  P G+         C R++  +   +    H Y+    
Sbjct: 463 SGARILEAKKIKFPPCARCGQ--PAGQGCANSKCKKCCRYQSKH-ELLDCKPHRYLFASQ 519

Query: 280 P 282
           P
Sbjct: 520 P 520


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,881,164
Number of Sequences: 27780
Number of extensions: 331970
Number of successful extensions: 820
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 787
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 818
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)