Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12g22f
(568 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or cys... 66 2e-11
AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protei... 66 2e-11
AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or cys... 54 5e-08
AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin prote... 54 5e-08
U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein... 42 4e-04
AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or cys... 42 4e-04
Z81083-4|CAB03102.1| 645|Caenorhabditis elegans Hypothetical pr... 27 7.1
U70858-7|AAB09177.1| 1484|Caenorhabditis elegans Hypothetical pr... 27 7.1
Z74473-7|CAA98952.1| 3871|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z74046-5|CAA98557.1| 3871|Caenorhabditis elegans Hypothetical pr... 27 9.4
>AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 362
Score = 66.1 bits (154), Expect = 2e-11
Identities = 41/160 (25%), Positives = 78/160 (48%), Gaps = 1/160 (0%)
Frame = +1
Query: 88 FSERPRNFSIELLYHTQTQTDGHVVISPFGIWTLMTGIALGASGNSYRQLSRAFILPKNP 267
F R F++ L +T + +V SP I +++ + G G+S Q+ +
Sbjct: 2 FDVAERRFALNFL-NTLPVHNESLVFSPLSIALVLSLVHTGVRGSSRDQIRNTLLSGATD 60
Query: 268 ATLIEGYKSLTDVVLDQTANGVSLVSRNFVFLDNDFTLLPAFRTTLQKDFGASIKVLDFS 447
L+E + ++ V + T GV + N V+L FT+ P F +T K++GA K LD +
Sbjct: 61 EQLVEHFSFVSKEVKNGT-KGVEVYLANKVYLKKGFTVNPTFLSTALKNYGADAKSLDLT 119
Query: 448 DPNSARIANTYIE-KSGGRVSNVLRSDDFQESRLILTNVI 564
P + + N+++ + G++ N+ D +++ +L N I
Sbjct: 120 TPAAVQEINSFVNTATNGKIKNIATQDSIKDAIALLINSI 159
>AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protein 3
protein.
Length = 362
Score = 66.1 bits (154), Expect = 2e-11
Identities = 41/160 (25%), Positives = 78/160 (48%), Gaps = 1/160 (0%)
Frame = +1
Query: 88 FSERPRNFSIELLYHTQTQTDGHVVISPFGIWTLMTGIALGASGNSYRQLSRAFILPKNP 267
F R F++ L +T + +V SP I +++ + G G+S Q+ +
Sbjct: 2 FDVAERRFALNFL-NTLPVHNESLVFSPLSIALVLSLVHTGVRGSSRDQIRNTLLSGATD 60
Query: 268 ATLIEGYKSLTDVVLDQTANGVSLVSRNFVFLDNDFTLLPAFRTTLQKDFGASIKVLDFS 447
L+E + ++ V + T GV + N V+L FT+ P F +T K++GA K LD +
Sbjct: 61 EQLVEHFSFVSKEVKNGT-KGVEVYLANKVYLKKGFTVNPTFLSTALKNYGADAKSLDLT 119
Query: 448 DPNSARIANTYIE-KSGGRVSNVLRSDDFQESRLILTNVI 564
P + + N+++ + G++ N+ D +++ +L N I
Sbjct: 120 TPAAVQEINSFVNTATNGKIKNIATQDSIKDAIALLINSI 159
>AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 359
Score = 54.4 bits (125), Expect = 5e-08
Identities = 42/155 (27%), Positives = 78/155 (50%), Gaps = 2/155 (1%)
Frame = +1
Query: 106 NFSIELLYHTQTQTDGHVVISPFGIWTLMTGIALGASGNSYRQLSRAFILPKNPATLIEG 285
+F+++LL G VV+SP I + I GA G++ ++L + + E
Sbjct: 10 DFALKLL--ATLPHSGSVVLSPLSISLGLALIHAGACGSTQKELEDVL----GGSRIFEE 63
Query: 286 YKSLTDVVLDQTANGVSLVSRNFVFLDNDFTLLPAFRTTLQKDFGASIKVLDFSD-PNSA 462
+ L + V D T NGV N VF++ +T+ + T++K + AS + LDFS +A
Sbjct: 64 FSGLMEAVGD-TDNGVETKIVNRVFVNQAYTIHQDYLETVEKLYKASGESLDFSQTEQAA 122
Query: 463 RIANTYIEK-SGGRVSNVLRSDDFQESRLILTNVI 564
+ NT++E + G++ +++ +D + L N +
Sbjct: 123 KTMNTFVENHTNGKIKDLIPADSANNAFAFLVNAM 157
>AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin protein
2 protein.
Length = 359
Score = 54.4 bits (125), Expect = 5e-08
Identities = 42/155 (27%), Positives = 78/155 (50%), Gaps = 2/155 (1%)
Frame = +1
Query: 106 NFSIELLYHTQTQTDGHVVISPFGIWTLMTGIALGASGNSYRQLSRAFILPKNPATLIEG 285
+F+++LL G VV+SP I + I GA G++ ++L + + E
Sbjct: 10 DFALKLL--ATLPHSGSVVLSPLSISLGLALIHAGACGSTQKELEDVL----GGSRIFEE 63
Query: 286 YKSLTDVVLDQTANGVSLVSRNFVFLDNDFTLLPAFRTTLQKDFGASIKVLDFSD-PNSA 462
+ L + V D T NGV N VF++ +T+ + T++K + AS + LDFS +A
Sbjct: 64 FSGLMEAVGD-TDNGVETKIVNRVFVNQAYTIHQDYLETVEKLYKASGESLDFSQTEQAA 122
Query: 463 RIANTYIEK-SGGRVSNVLRSDDFQESRLILTNVI 564
+ NT++E + G++ +++ +D + L N +
Sbjct: 123 KTMNTFVENHTNGKIKDLIPADSANNAFAFLVNAM 157
>U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein 6
protein.
Length = 375
Score = 41.5 bits (93), Expect = 4e-04
Identities = 34/154 (22%), Positives = 68/154 (44%), Gaps = 3/154 (1%)
Frame = +1
Query: 106 NFSIELLYHTQTQTDGHVVISPFGIWTLMTGIALGASGNSYRQLSRAFILPKNPATLIEG 285
+F + LL Q T+ V SP I ++ + + A G + ++ +A + L +
Sbjct: 19 DFGLSLL-RQQNLTESFV-FSPLSIALALSLVHVAAKGETRDEIRKALLNGATDEELEQH 76
Query: 286 YKSLTDVVLDQTANGVSLVSRNFVFLDNDFTLLPAFRTTLQKDFGASIKVLDFSDPN-SA 462
+ +++ +L G + N +F FT+ + ++K + A L+F D SA
Sbjct: 77 FSNISAGLL-VAEKGTEVNVANHIFSRKTFTIKKLYLNDVKKLYNAGASQLNFEDQEASA 135
Query: 463 RIANTYI-EKSGGRVSNVLRSDDFQESRL-ILTN 558
N ++ E + G + ++ D E + +LTN
Sbjct: 136 EAINNFVSENTKGHIKKIINPDSISEELVAVLTN 169
>AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 375
Score = 41.5 bits (93), Expect = 4e-04
Identities = 34/154 (22%), Positives = 68/154 (44%), Gaps = 3/154 (1%)
Frame = +1
Query: 106 NFSIELLYHTQTQTDGHVVISPFGIWTLMTGIALGASGNSYRQLSRAFILPKNPATLIEG 285
+F + LL Q T+ V SP I ++ + + A G + ++ +A + L +
Sbjct: 19 DFGLSLL-RQQNLTESFV-FSPLSIALALSLVHVAAKGETRDEIRKALLNGATDEELEQH 76
Query: 286 YKSLTDVVLDQTANGVSLVSRNFVFLDNDFTLLPAFRTTLQKDFGASIKVLDFSDPN-SA 462
+ +++ +L G + N +F FT+ + ++K + A L+F D SA
Sbjct: 77 FSNISAGLL-VAEKGTEVNVANHIFSRKTFTIKKLYLNDVKKLYNAGASQLNFEDQEASA 135
Query: 463 RIANTYI-EKSGGRVSNVLRSDDFQESRL-ILTN 558
N ++ E + G + ++ D E + +LTN
Sbjct: 136 EAINNFVSENTKGHIKKIINPDSISEELVAVLTN 169
>Z81083-4|CAB03102.1| 645|Caenorhabditis elegans Hypothetical
protein F44F1.5 protein.
Length = 645
Score = 27.5 bits (58), Expect = 7.1
Identities = 31/113 (27%), Positives = 48/113 (42%)
Frame = +1
Query: 49 VLFFVGACYCDVDFSERPRNFSIELLYHTQTQTDGHVVISPFGIWTLMTGIALGASGNSY 228
V+F + + +VD RP EL+Y + T G +V G + I +G
Sbjct: 105 VIFAFNSIFVEVD---RP-----ELVYDREKATTGSMVTVLNGEKETIV-IERDETGAMM 155
Query: 229 RQLSRAFILPKNPATLIEGYKSLTDVVLDQTANGVSLVSRNFVFLDNDFTLLP 387
+ S PKNP T + T+ ++ + V+ +S F FLD TL P
Sbjct: 156 TRSSMHACSPKNPVTTLVMQSIETNGLMVREDEEVTEISNEFGFLDYLKTLAP 208
>U70858-7|AAB09177.1| 1484|Caenorhabditis elegans Hypothetical
protein T01C4.1 protein.
Length = 1484
Score = 27.5 bits (58), Expect = 7.1
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +3
Query: 243 SVYFAQKSGNAYRRVQIPDGRGARSDRERSIPGQPELCLLGQR 371
S+ + K GN +V D G + ER + G+ LC +G +
Sbjct: 654 SLSYCTKDGNDCNQVDKGDAPGLKFLTERKVGGKFSLCAIGSK 696
>Z74473-7|CAA98952.1| 3871|Caenorhabditis elegans Hypothetical
protein ZC116.3 protein.
Length = 3871
Score = 27.1 bits (57), Expect = 9.4
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +1
Query: 442 FSDPNSARIANTYIEKSGGRVSNVL 516
F PN+ Y+E SGGR N L
Sbjct: 875 FYTPNAVETYENYVEFSGGRTDNAL 899
>Z74046-5|CAA98557.1| 3871|Caenorhabditis elegans Hypothetical
protein ZC116.3 protein.
Length = 3871
Score = 27.1 bits (57), Expect = 9.4
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +1
Query: 442 FSDPNSARIANTYIEKSGGRVSNVL 516
F PN+ Y+E SGGR N L
Sbjct: 875 FYTPNAVETYENYVEFSGGRTDNAL 899
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,006,733
Number of Sequences: 27780
Number of extensions: 280216
Number of successful extensions: 843
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 792
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 843
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1176726318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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