Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12g06f
         (619 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.            31   0.039
U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    29   0.12 
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    29   0.12 
U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette...    29   0.12 

>EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.
          Length = 213

 Score = 30.7 bits (66), Expect = 0.039
 Identities = 21/76 (27%), Positives = 36/76 (47%)
 Frame = +3

Query: 186 TPGYVGFANLPNQVHRKSVKKGFEFTLMVVGESGLGKSTLVNSLFLTDLYPERVIPDATE 365
           +P   G A  PN   +  +    +F L+++GES +GKS+LV        +  +       
Sbjct: 4   SPRVGGAAQRPNGATQNKI---CQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAA 60

Query: 366 KTNQTVKLDASTVEIE 413
              QT+ +D +TV+ E
Sbjct: 61  FLTQTLCIDDTTVKFE 76


>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 29.1 bits (62), Expect = 0.12
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +3

Query: 264 LMVVGESGLGKSTLVNSLFLTDLYPERVIPDATEKTN 374
           L V+G SG GK+TL+N+L        ++ P+A    N
Sbjct: 129 LAVMGSSGAGKTTLLNALAFRSPPGVKISPNAVRALN 165


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 29.1 bits (62), Expect = 0.12
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +3

Query: 264 LMVVGESGLGKSTLVNSLFLTDLYPERVIPDATEKTN 374
           L V+G SG GK+TL+N+L        ++ P+A    N
Sbjct: 129 LAVMGSSGAGKTTLLNALAFRSPPGVKISPNAVRALN 165


>U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 673

 Score = 29.1 bits (62), Expect = 0.12
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +3

Query: 264 LMVVGESGLGKSTLVNSLFLTDLYPERVIPDATEKTN 374
           L V+G SG GK+TL+N+L        ++ P+A    N
Sbjct: 107 LAVMGSSGAGKTTLLNALAFRSPPGVKISPNAVRALN 143


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 559,433
Number of Sequences: 2352
Number of extensions: 11461
Number of successful extensions: 16
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60553008
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)