Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12g05f
(644 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_1062 + 8381281-8381490,8382353-8382449,8382546-8382637,838... 73 1e-13
01_03_0183 + 13543833-13544051,13544161-13544257,13545616-135457... 69 3e-12
05_01_0405 - 3191639-3192059,3192107-3192234,3192312-3192440,319... 68 6e-12
01_01_0402 + 3046504-3046582,3047265-3047487,3047954-3048107,304... 42 4e-04
07_03_1748 - 29195037-29195427,29195552-29195679,29195810-291959... 41 0.001
01_01_0334 - 2698347-2699020,2699321-2699477,2699576-2699647,269... 35 0.048
01_06_0893 - 32766994-32768841,32769596-32769782,32769860-327699... 32 0.34
06_03_1344 - 29472139-29473292,29474478-29475386,29475504-294756... 31 0.59
01_06_0496 - 29795490-29796638,29796811-29796870,29798168-297983... 31 0.78
07_01_0010 + 72162-74303,74470-74545,75971-76043,76496-76540,779... 30 1.4
05_06_0212 + 26410330-26410419,26410562-26410846,26411005-264112... 29 3.2
02_01_0520 + 3761051-3761107,3761420-3761822,3761960-3762129 29 3.2
06_01_0273 + 2022479-2022592,2022830-2022973,2023524-2023601,202... 29 4.2
03_05_0211 - 22020515-22020687,22020801-22020831,22022060-220221... 29 4.2
01_03_0071 + 12203227-12203368,12203551-12203703,12204622-122046... 29 4.2
01_02_0128 + 11407888-11408241 29 4.2
08_02_0259 - 14974526-14974572,14974670-14974742,14974829-149748... 28 5.5
12_02_1280 - 27517683-27517871,27517955-27518029,27518155-275183... 28 7.3
09_06_0001 + 20114108-20115686,20115813-20115928,20116416-201173... 28 7.3
07_01_0180 + 1266975-1267550 28 7.3
02_03_0380 + 18335903-18337837 28 7.3
03_05_0432 - 24231984-24233048,24233391-24235160,24235261-242365... 27 9.7
02_05_0366 - 28313190-28313601,28313759-28314225,28315044-283157... 27 9.7
01_06_1560 + 38251268-38251471,38251567-38251672,38251992-382522... 27 9.7
>01_01_1062 +
8381281-8381490,8382353-8382449,8382546-8382637,
8382729-8382860,8382975-8383160,8383244-8383407,
8383514-8383592,8384484-8384612,8385102-8385229,
8385348-8385711
Length = 526
Score = 73.3 bits (172), Expect = 1e-13
Identities = 51/129 (39%), Positives = 76/129 (58%), Gaps = 11/129 (8%)
Frame = +2
Query: 287 RMHVFKNAGK---DVDEMRRRRNEVTVELRKNKREETLQKRRN--------VPISYSTDE 433
R+ V +N K D +E RRRR + VE+RK++REE+L K+R VP S +T
Sbjct: 8 RVEVRRNRYKVAVDAEEGRRRREDNMVEIRKSRREESLLKKRREGLQAQAPVPASAATG- 66
Query: 434 EEIDKNLATTDLDELVMNAANAENPEAQLAAVQQCRKLLSCDKNPPIDELIAAGILPILV 613
+DK L + L ++ + +N QL A Q RKLLS +++PPI+E+I +G++P V
Sbjct: 67 --VDKKLES--LPAMIGGVYSDDN-NLQLEATTQFRKLLSIERSPPIEEVIQSGVVPRFV 121
Query: 614 QCLSRADNP 640
Q L+R D P
Sbjct: 122 QFLTREDFP 130
>01_03_0183 +
13543833-13544051,13544161-13544257,13545616-13545707,
13545928-13546047,13546170-13546355,13546439-13546602,
13546691-13546769,13548256-13548387,13548560-13548687,
13548785-13549140,13549211-13549221,13549312-13549431,
13549510-13549637,13552210-13552260,13553105-13553189,
13553856-13553954,13555260-13555535
Length = 780
Score = 68.9 bits (161), Expect = 3e-12
Identities = 42/116 (36%), Positives = 63/116 (54%), Gaps = 5/116 (4%)
Frame = +2
Query: 308 AGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDE---EEIDKNLATTDLDEL 478
A D E RRRR ++TV LRK R+ L+++R P + + E + + L+ L
Sbjct: 18 ASMDAAEGRRRREDITVILRKADRDRALKEKRRRPTATAAAEGLPQAAHSSAIEKKLESL 77
Query: 479 VMNAAN--AENPEAQLAAVQQCRKLLSCDKNPPIDELIAAGILPILVQCLSRADNP 640
M +++ QL + Q RKLLS D PPIDE+I +G+LP V+ L+R + P
Sbjct: 78 PMMVQGLYSDDSSMQLESTTQFRKLLSVDHCPPIDEVIRSGVLPRFVEFLTREEYP 133
>05_01_0405 -
3191639-3192059,3192107-3192234,3192312-3192440,
3193538-3193616,3193716-3193879,3193968-3194153,
3194258-3194389,3194484-3194575,3195054-3195150,
3195258-3195485
Length = 551
Score = 68.1 bits (159), Expect = 6e-12
Identities = 44/132 (33%), Positives = 74/132 (56%), Gaps = 8/132 (6%)
Frame = +2
Query: 269 TDQAKNRMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRN--VPISYSTDEEEI 442
+++A+ R +K A D DE RRRR + VE+RK++REE+L K+R +P + +
Sbjct: 6 SERAEVRRSRYKVA-VDADEGRRRREDNMVEIRKSRREESLLKKRRDGLPAAAAAAAAAS 64
Query: 443 DKNLATTDLDE------LVMNAANAENPEAQLAAVQQCRKLLSCDKNPPIDELIAAGILP 604
++ L + ++ A +++ QL A Q RKLLS +++PPI+E+I G++P
Sbjct: 65 PLLAHSSALQQKLEGLPAMVQAVQSDDSAVQLEATTQFRKLLSIERSPPIEEVINTGVVP 124
Query: 605 ILVQCLSRADNP 640
+ L R D P
Sbjct: 125 RFIAFLQREDYP 136
>01_01_0402 +
3046504-3046582,3047265-3047487,3047954-3048107,
3048253-3048355,3048554-3048738,3048972-3049051,
3049433-3049511,3050015-3050096,3050221-3050279,
3050379-3050684,3050825-3050989
Length = 504
Score = 41.9 bits (94), Expect = 4e-04
Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 17/145 (11%)
Frame = +2
Query: 242 ETASTDKMATDQAKNRMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRR--NVPI 415
++AS + ++ K++ ++ RRR E + + K +RE ++ +R PI
Sbjct: 4 DSASPSPSSASPLQHHREALKSSVRNTAASRRR--EQAIAIGKERREALIRAKRVCRAPI 61
Query: 416 SYSTDEEEIDKNLATTDLDELVMNAANAENPEA---------------QLAAVQQCRKLL 550
S S DE E+++ D ++ + A A E ++ A++ R+LL
Sbjct: 62 SGS-DEAEMEEGDMVVDEEKACLEAKTAHAVEELKSALSIQGKGVQKKKIEALRDLRRLL 120
Query: 551 SCDKNPPIDELIAAGILPILVQCLS 625
S + P +D I AG +P+LVQ LS
Sbjct: 121 SQPEVPLVDTAIKAGAVPLLVQYLS 145
>07_03_1748 -
29195037-29195427,29195552-29195679,29195810-29195938,
29196334-29196412,29196508-29196671,29196754-29196936,
29197021-29197146,29197237-29197328,29197412-29197508,
29198013-29198339
Length = 571
Score = 40.7 bits (91), Expect = 0.001
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Frame = +2
Query: 422 STDEEEIDKNLATTDLDEL--VMNAANAENPEAQLAAVQQCRKLLSCDKNPPIDELIAAG 595
S E + A ++L+ L ++ +++ +QL A Q R+LLS +KNP + ++I A
Sbjct: 95 SPPAESVPPTAADSELEGLSEMVEKVWSDDTTSQLEATIQFRRLLSDEKNPTVIKIIRAD 154
Query: 596 ILPILVQCLSRADNP 640
+LP LSR ++P
Sbjct: 155 VLPRFSDFLSRHEHP 169
Score = 27.9 bits (59), Expect = 7.3
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +2
Query: 287 RMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRR 403
R+ +K G DV RRRR + + +R++ R+ L KRR
Sbjct: 14 RLAAYK-PGVDVARSRRRREDRLLAVRRSNRDAGLFKRR 51
>01_01_0334 -
2698347-2699020,2699321-2699477,2699576-2699647,
2699697-2700641,2701183-2701259,2701908-2702064
Length = 693
Score = 35.1 bits (77), Expect = 0.048
Identities = 28/96 (29%), Positives = 42/96 (43%), Gaps = 4/96 (4%)
Frame = +2
Query: 308 AGKDVDEMRRRRNEVTVELRKNKRE----ETLQKRRNVPISYSTDEEEIDKNLATTDLDE 475
A + V++ RR +T L K + Q +R + S ST + +D T L
Sbjct: 240 AKRPVNQGFRRSRSLTESLEKYSHLLDSISSNQSKRTLTSSKSTRDHSLDAPAVMTGLQS 299
Query: 476 LVMNAANAENPEAQLAAVQQCRKLLSCDKNPPIDEL 583
LVM A N PE LA R ++ D + +DE+
Sbjct: 300 LVMTAENLVIPEHALAPYVPERIIVDGDVDAAMDEI 335
>01_06_0893 -
32766994-32768841,32769596-32769782,32769860-32769987,
32770080-32770283,32770373-32770523,32771424-32771533,
32772534-32772903,32773031-32773189,32773719-32773848,
32773921-32773989,32774066-32774154,32774319-32774439,
32775878-32776148
Length = 1278
Score = 32.3 bits (70), Expect = 0.34
Identities = 18/79 (22%), Positives = 37/79 (46%)
Frame = +2
Query: 239 VETASTDKMATDQAKNRMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPIS 418
+E A + +A + + + + A +EM+ +R T + ++ K+++ QK+ N +
Sbjct: 442 IEVAYQEAVALKRQEELIREEEEAWLLENEMKGKRGSTTEKDKRAKKKQAKQKKNNRKVK 501
Query: 419 YSTDEEEIDKNLATTDLDE 475
EE+ D N DE
Sbjct: 502 DKDREEKCDSNFPERSQDE 520
>06_03_1344 -
29472139-29473292,29474478-29475386,29475504-29475618,
29476017-29476218,29477177-29477296,29477431-29477582,
29478177-29478461
Length = 978
Score = 31.5 bits (68), Expect = 0.59
Identities = 12/34 (35%), Positives = 24/34 (70%)
Frame = +2
Query: 344 NEVTVELRKNKREETLQKRRNVPISYSTDEEEID 445
+EV ++ RK+ + E +K+R+V SYS+ + E++
Sbjct: 418 SEVDIDTRKHPKREHRKKKRDVTESYSSSDSEVE 451
Score = 28.7 bits (61), Expect = 4.2
Identities = 18/72 (25%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +2
Query: 233 YCVETASTDKMATDQAKNRMHVFKNAGKDVDE-MRRRRNEVTVELRKNKREETLQKRRNV 409
YC +++ + A +A+ K+ K + E + + EV + R++++ E +K+RN+
Sbjct: 352 YCSDSSFSG--AEVEARKSKQKSKHKKKHLPESLSDSKVEVGRDTRRHQKREHRKKKRNI 409
Query: 410 PISYSTDEEEID 445
S S+ + E+D
Sbjct: 410 TESESSSDSEVD 421
>01_06_0496 -
29795490-29796638,29796811-29796870,29798168-29798371,
29798739-29798984,29799375-29799464
Length = 582
Score = 31.1 bits (67), Expect = 0.78
Identities = 16/64 (25%), Positives = 34/64 (53%)
Frame = +2
Query: 263 MATDQAKNRMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEI 442
M T+ AK + +V K++ VD + ++++N R+ + +VP S ++ E++
Sbjct: 259 METESAKLKRNVRKSSAVTVDSFQTNMTVEPEKIKRNSRKFSSSAADSVPDSQLSELEKV 318
Query: 443 DKNL 454
+NL
Sbjct: 319 KRNL 322
>07_01_0010 +
72162-74303,74470-74545,75971-76043,76496-76540,
77916-78116,78463-78541,78637-78678,78788-78847,
79087-80484,80777-80902,81037-81300
Length = 1501
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/64 (26%), Positives = 30/64 (46%)
Frame = -2
Query: 622 KALN*DGEYSSSYELINRRVFITREQFSALLHSSQLCFRVFCVGSVHHQLIKVGGSEVLV 443
K N D Y E+I + + F +++S + RVF + H ++K+G +V
Sbjct: 617 KTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVV 676
Query: 442 DLLL 431
D +L
Sbjct: 677 DTIL 680
>05_06_0212 +
26410330-26410419,26410562-26410846,26411005-26411208,
26411636-26411692,26411859-26412926
Length = 567
Score = 29.1 bits (62), Expect = 3.2
Identities = 22/96 (22%), Positives = 43/96 (44%), Gaps = 2/96 (2%)
Frame = +2
Query: 263 MATDQAKNRMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEI 442
M T+ K + + +++ V+ + T + R+N R+ T +VP S T+ E++
Sbjct: 273 METESGKLKRNSRRSSAAPVESSQTNIAMETEKSRRNPRKFTSSTADSVPESQLTELEKV 332
Query: 443 DKNLATTDLDELVMNAANAENPEAQLAAVQ--QCRK 544
+NL + + A+ P ++ Q QC K
Sbjct: 333 KRNL--RKVTNSMAEASKVSTPATEIPERQEVQCEK 366
>02_01_0520 + 3761051-3761107,3761420-3761822,3761960-3762129
Length = 209
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Frame = +2
Query: 302 KNAGKDVDEMRRRRNE----VTVELRKNKREETLQKRRNVPISYSTDEEE 439
KN GK+ +E + R+ +ELR + E+ ++ + P++ + EEE
Sbjct: 4 KNQGKEEEEKQYRKERDVLWTRIELRDREEEKNTGRQEHAPLNLTAREEE 53
>06_01_0273 +
2022479-2022592,2022830-2022973,2023524-2023601,
2025361-2025585,2025684-2025782,2026177-2026235,
2026351-2026501,2026590-2026754
Length = 344
Score = 28.7 bits (61), Expect = 4.2
Identities = 25/72 (34%), Positives = 36/72 (50%)
Frame = +2
Query: 347 EVTVELRKNKREETLQKRRNVPISYSTDEEEIDKNLATTDLDELVMNAANAENPEAQLAA 526
+V E RK K EE+ VP + EE I K TD +EL+ N + E +
Sbjct: 183 KVENEERKQKDEES----NGVPKVNISPEEAIAKLAKDTD-NELI--EINKQLEELRQMV 235
Query: 527 VQQCRKLLSCDK 562
VQ+CRK+ + +K
Sbjct: 236 VQKCRKMTTYEK 247
>03_05_0211 -
22020515-22020687,22020801-22020831,22022060-22022169,
22022715-22023102,22023344-22023397,22023739-22023849,
22023956-22024015,22024618-22024694,22026155-22026188,
22026267-22027235
Length = 668
Score = 28.7 bits (61), Expect = 4.2
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Frame = +2
Query: 305 NAGKDVDEMRRRRNEVTVELRKNKREE---TLQKRRNVPISYSTDEEEIDKNLATTDLDE 475
N K + +R+R K ++ T K+RN + Y TDE+E D + +D +E
Sbjct: 414 NIRKGSNSRKRKRGSTPKSSSKKFDDDDDITPSKKRNKALEYDTDEDEDDADPMKSDSEE 473
>01_03_0071 +
12203227-12203368,12203551-12203703,12204622-12204683,
12204749-12204830,12206029-12206126,12206240-12206657,
12206793-12206915,12207159-12207178
Length = 365
Score = 28.7 bits (61), Expect = 4.2
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
Frame = +2
Query: 341 RNEVTVELRKNKRE--ETLQKRRNVPISYSTDEEEIDKNLATTDLDELVMNAANAENPEA 514
RN V+ L+K K + QK + +PI +T+ I + L + +MN ++ +
Sbjct: 171 RNTVSSYLQKYKAYLLKQEQKDQQLPIDDNTNTSSIKSQQGSASLQQQIMNYGENDSMDN 230
Query: 515 QLAAVQQCRKLLSCDKNPPI 574
Q + Q R +K P +
Sbjct: 231 QSIILSQTRYNEHSNKQPKL 250
>01_02_0128 + 11407888-11408241
Length = 117
Score = 28.7 bits (61), Expect = 4.2
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -3
Query: 603 GSIPAAMSSSIGGFLSHESSFLHC 532
G + + S + GGF+SH+ S HC
Sbjct: 76 GGVSSTESRARGGFISHDMSLCHC 99
>08_02_0259 -
14974526-14974572,14974670-14974742,14974829-14974891,
14975030-14975097,14975172-14975295,14976434-14976493,
14976744-14976806,14976902-14977942,14978027-14978093,
14978188-14978303,14978454-14978540,14978749-14978838,
14979128-14979214,14979366-14979428,14979509-14979566,
14980174-14980231,14980349-14980416,14980508-14980587,
14981084-14981147,14981321-14981392,14981517-14981576,
14982344-14982398,14982487-14982520,14983845-14983931,
14984036-14984122,14984211-14984408,14984509-14984639,
14984739-14984838
Length = 1066
Score = 28.3 bits (60), Expect = 5.5
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 9/77 (11%)
Frame = +2
Query: 272 DQAKNRMHVFKNAGKDVDEMRRRRNEV-----TVELRKNKREETLQKRRNVPISYSTDE- 433
D A R + + K+ E RR++ T +LRK R+ LQKRR+ I DE
Sbjct: 195 DAANTRKLMERQLSKEEQEEITRRSQAMDKNDTSDLRKFSRQAYLQKRRDKKIDEIRDEI 254
Query: 434 ---EEIDKNLATTDLDE 475
E I +++ T+ +E
Sbjct: 255 LDHEYIFQDVKLTEAEE 271
>12_02_1280 -
27517683-27517871,27517955-27518029,27518155-27518318,
27518424-27518538,27518783-27519074,27519162-27519318,
27519438-27519510,27520309-27520377,27520471-27520694,
27520800-27520981,27521067-27522064,27522335-27522580
Length = 927
Score = 27.9 bits (59), Expect = 7.3
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +2
Query: 323 DEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEIDKN 451
+E RRR+ + + R ++ LQK++ + S DEEE++ N
Sbjct: 443 EEARRRKEAIMAKYR----QQQLQKQQLESLPRSNDEEEVEMN 481
>09_06_0001 +
20114108-20115686,20115813-20115928,20116416-20117394,
20118820-20119082
Length = 978
Score = 27.9 bits (59), Expect = 7.3
Identities = 20/72 (27%), Positives = 37/72 (51%)
Frame = +2
Query: 260 KMATDQAKNRMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEE 439
++ TD+ K + + K+ +DE+ +R NE + +KN++ + + + I D EE
Sbjct: 635 RVKTDKDKLKKDIQKSKFLSIDEVFKRLNE---QKKKNEKPDLISLFEDQKI-MKQDLEE 690
Query: 440 IDKNLATTDLDE 475
I K L +L E
Sbjct: 691 IRKRLYMLELKE 702
>07_01_0180 + 1266975-1267550
Length = 191
Score = 27.9 bits (59), Expect = 7.3
Identities = 17/70 (24%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = +2
Query: 311 GKDVDEMRRRRNEVTVELRKNKREETLQKRRNV-PISYSTDEEEIDKNLATTDLDELVMN 487
G+D +E RRRR + R++ R ++R+ V + + DE ++ + LD
Sbjct: 67 GEDGEEERRRRLRRKISNRESARRSRARRRQRVEELERAADELRAERRALASRLDATARR 126
Query: 488 AANAENPEAQ 517
A A+
Sbjct: 127 ALAVRGANAR 136
>02_03_0380 + 18335903-18337837
Length = 644
Score = 27.9 bits (59), Expect = 7.3
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +2
Query: 392 QKRRNVPISYSTDEEEIDKNLATTDLDELVMNAA 493
Q++R P+ Y T EEI A LDEL A
Sbjct: 420 QQKREFPLGYKTFGEEIPPQYAIQVLDELTKGEA 453
>03_05_0432 - 24231984-24233048,24233391-24235160,24235261-24236582,
24236668-24237013
Length = 1500
Score = 27.5 bits (58), Expect = 9.7
Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Frame = +2
Query: 296 VFKNAGKDVDEMRRRRNEVTVELRKNKREETLQ-KRRNVPISYSTDEEEIDKNLATTDLD 472
+ ++ G++V ++R RN + E ++ K EE LQ +R + TDE + +D
Sbjct: 760 LLEHFGQEVADLRSERNTLKQE-QQAKSEELLQLQREKQELVNITDEFWEEVETRNRKVD 818
Query: 473 ELVMNAANAENPEAQLAAVQQCRKLLSCD 559
EL A A+ QL+ +Q R+ L +
Sbjct: 819 EL---RAEAKFLVGQLSELQGSRRSLQSE 844
>02_05_0366 -
28313190-28313601,28313759-28314225,28315044-28315782,
28316548-28316615,28316693-28316757,28316922-28320162,
28320239-28320301,28320756-28320824,28321020-28321055,
28322035-28322280,28322531-28322569,28322695-28322816,
28322921-28323004,28323100-28323235,28323486-28323535,
28323620-28323756,28323863-28323951,28324847-28324954,
28325080-28325163,28325841-28325888,28326036-28326153,
28328262-28328347
Length = 2168
Score = 27.5 bits (58), Expect = 9.7
Identities = 20/88 (22%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Frame = +2
Query: 335 RRRNEVTVELRKNKREETLQKRRNVPISYSTDEE--EIDKNLATTDLDELVMNAANAENP 508
R +N+ L+ N+R + + N+ S TD + EID + ++ +E + +
Sbjct: 191 RLQNQENDSLQTNQRSQQELAQENINASSPTDVDNVEIDDDYNSSLGEEPKDDEHTIDED 250
Query: 509 EAQLAAVQQCRKL--LSCDKNPPIDELI 586
EAQ+ ++ +L L + + P+D+++
Sbjct: 251 EAQITEAERNEELAALQAEADLPLDDIL 278
>01_06_1560 +
38251268-38251471,38251567-38251672,38251992-38252203,
38252306-38252512,38253327-38254694
Length = 698
Score = 27.5 bits (58), Expect = 9.7
Identities = 19/43 (44%), Positives = 22/43 (51%), Gaps = 7/43 (16%)
Frame = -2
Query: 388 CFLSFVFS*LDCDF------IPSPAHFID-IFACILEHMHAVF 281
C L FVF LDC F +PS I + ACI +H HA F
Sbjct: 147 CRLDFVF--LDCTFSKCFLKLPSKESAIQQVIACIWKHPHAPF 187
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,705,747
Number of Sequences: 37544
Number of extensions: 340946
Number of successful extensions: 955
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 918
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 948
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1596695220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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