Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12g04r
(767 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0385 + 18424617-18425594,18426811-18426850,18427581-184276... 32 0.44
06_03_0226 - 18420293-18420697 32 0.44
12_02_0442 - 19118536-19119222 31 0.77
01_01_1114 - 8820996-8821538,8826753-8827178 31 0.77
12_01_0551 + 4446937-4447353,4449141-4450013,4451206-4451244,445... 31 1.0
12_01_0386 + 3023431-3023522,3023951-3024097,3024227-3024308,302... 31 1.0
10_08_0341 + 16942332-16942361,16942907-16943347 31 1.0
02_03_0121 + 15468894-15468906,15469008-15469193,15474157-154746... 31 1.3
12_02_0674 - 21745321-21746223,21746229-21747608 30 1.8
01_01_1115 + 8828544-8828620,8829608-8829779,8829873-8830183,883... 30 1.8
01_01_1113 - 8815890-8816609,8816656-8817318 30 1.8
11_06_0532 - 24726763-24727033,24729113-24729657 30 2.3
09_02_0082 - 4060018-4061604 30 2.3
06_03_0395 - 20354713-20355570 30 2.3
03_04_0052 - 16859200-16860060 30 2.3
10_08_0962 + 21880919-21880983,21881100-21881487,21881807-218819... 29 3.1
04_03_0572 + 17310729-17310746,17312209-17312902,17312991-173134... 29 3.1
04_01_0034 - 401208-402923 29 3.1
05_01_0544 - 4740460-4740493,4742042-4743033 29 4.1
01_05_0048 - 17561963-17563585 29 4.1
11_01_0370 + 2814888-2814979,2815450-2815620,2815753-2815834,281... 29 5.4
08_01_0656 + 5652383-5653009,5653260-5653736,5654969-5655289,565... 29 5.4
05_06_0186 - 26207298-26208548,26208743-26208853,26209286-262095... 29 5.4
03_06_0106 - 31682200-31682775 29 5.4
02_02_0353 + 9276316-9276518,9276915-9277314 29 5.4
09_04_0717 + 19706160-19706327,19707036-19707157,19707408-197075... 28 7.1
07_03_1572 - 27815760-27815819,27816374-27816494,27816580-278166... 28 7.1
06_01_0882 + 6759378-6759707,6759837-6760488,6760609-6760673,676... 28 7.1
03_06_0599 + 34984869-34985319,34986581-34987563 28 7.1
03_03_0126 + 14665374-14665539,14665790-14666127 28 7.1
02_05_0425 - 28845707-28846189,28846262-28846403,28846496-288469... 28 7.1
07_03_0808 - 21668100-21669092 28 9.4
05_03_0206 - 10049244-10049360,10057973-10058367,10058456-100590... 28 9.4
03_02_0786 - 11169820-11170158,11170245-11170433,11171173-111714... 28 9.4
02_04_0544 - 23768808-23768910,23769005-23769030,23769379-237694... 28 9.4
01_07_0176 - 41733845-41734834,41736058-41736588 28 9.4
01_06_1765 + 39735629-39736240 28 9.4
>12_02_0385 +
18424617-18425594,18426811-18426850,18427581-18427636,
18428032-18428151
Length = 397
Score = 32.3 bits (70), Expect = 0.44
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = -3
Query: 579 VERLAQSDTCISEPSPGTRPRTRPAATQSSALTDTPTTSRLASI 448
+ER+ + T S P P + RPAAT S T PT + AS+
Sbjct: 36 IERILSTPTSSSTPPPQRQEGPRPAATSSLHETAGPTAAESASL 79
>06_03_0226 - 18420293-18420697
Length = 134
Score = 32.3 bits (70), Expect = 0.44
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -3
Query: 546 SEPSPGTRPRTRPAATQSSALTDTPTTSRLASITTSRC 433
++P+ G PR PAA S T T + A+ TTS C
Sbjct: 12 ADPAQGALPRADPAAAPSPTTTTTRVVAAAATPTTSTC 49
>12_02_0442 - 19118536-19119222
Length = 228
Score = 31.5 bits (68), Expect = 0.77
Identities = 28/81 (34%), Positives = 33/81 (40%), Gaps = 4/81 (4%)
Frame = -3
Query: 531 GTRPRTRPAATQSSALTD---TPTTSRLASITTSRC*S*IDRSRWTSTQSRRVCTRETPS 361
GT PAA TD TP+ S AS ++ S T+ Q RR R S
Sbjct: 71 GTTAVVAPAARSGEPATDKLATPSASSSASSWGEEDGG-VEPSAATAAQRRRQIRRHCYS 129
Query: 360 MTS-GPPPPAGDSPRTGAPRR 301
M PPPP + T AP R
Sbjct: 130 MPPLDPPPPPLPAAATAAPHR 150
>01_01_1114 - 8820996-8821538,8826753-8827178
Length = 322
Score = 31.5 bits (68), Expect = 0.77
Identities = 30/108 (27%), Positives = 41/108 (37%), Gaps = 12/108 (11%)
Frame = -2
Query: 754 HCHHDADELIIGGTDAG--------VNEYPHMVLLGYGDDVA--NIQWLCGGVLIS--ER 611
HC++ EL++G D V E +LL Y DVA + + CGG ++
Sbjct: 99 HCYNQGAELVVGEADVALASLDYGRVGESIQKILLPYAGDVALSVVSFACGGFTVAWGTN 158
Query: 610 FVLTAGHCLSSREVGAVRYVYIGALARHETTNPSRRYAVIRAHRHPDY 467
V+ G LS G LA N R +V R P Y
Sbjct: 159 HVVVDGRALSMLVGSWSELARSGTLAAGARPNHDR--SVFRPRATPSY 204
>12_01_0551 +
4446937-4447353,4449141-4450013,4451206-4451244,
4452339-4452581
Length = 523
Score = 31.1 bits (67), Expect = 1.0
Identities = 24/86 (27%), Positives = 40/86 (46%)
Frame = +2
Query: 143 SAIALTSVSGQCPVSVAHLSPRVEPALHVAIGRVLLGAFRRRELS*YHLLQHVRRGAPVL 322
S+ L+SVS +CP PR P A+ + + + + ++ VRR V+
Sbjct: 27 SSARLSSVS-ECPPPPPPPLPRPRPP-PPAVEALRIRLVSKGVILEVAEVERVRRECRVV 84
Query: 323 GESPAGGGGPLVIDGVSRVQTRRDCV 400
G GGGG + ++G V+ R+ V
Sbjct: 85 GRILGGGGGEVAVEGKVEVEAIREAV 110
>12_01_0386 +
3023431-3023522,3023951-3024097,3024227-3024308,
3024801-3024842,3024930-3024989,3025430-3027109,
3027239-3027340,3027461-3027604,3027704-3027829,
3027933-3028100
Length = 880
Score = 31.1 bits (67), Expect = 1.0
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = -3
Query: 558 DTCISEPSPGTRPRTRPAATQSSALTDTPTTSRLASITTSRC 433
D IS +PG + + +A+ ++LTD P+TS S T +C
Sbjct: 549 DAVISNVNPGGKQISGDSASCKTSLTDIPSTSYCGSKETKQC 590
>10_08_0341 + 16942332-16942361,16942907-16943347
Length = 156
Score = 31.1 bits (67), Expect = 1.0
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = -3
Query: 405 TSTQSRRVCTRETPSMTSGPPPPAGDSPRT 316
TSTQSR + ++TP+ T PPP G P T
Sbjct: 120 TSTQSRYLLAKDTPA-TLRPPPSEGTPPST 148
>02_03_0121 +
15468894-15468906,15469008-15469193,15474157-15474650,
15475090-15475521,15475597-15475821,15476065-15476346,
15476432-15476704,15477680-15477805,15481010-15481288,
15481313-15481588,15481670-15482113,15482200-15482397,
15482574-15482732,15482832-15483085,15483164-15483316,
15483395-15483683,15483769-15483807,15483913-15483951
Length = 1386
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -3
Query: 594 DTAYPVERLAQSDTCISEPSPGTRPRTRPAA-TQSSALTDTPTTSRLAS 451
++++ LA+ + +EP+ T PRT AA T+ +A + P T AS
Sbjct: 155 NSSFADSSLAEPEAAATEPTASTEPRTPDAASTEHAAASTEPPTPNAAS 203
>12_02_0674 - 21745321-21746223,21746229-21747608
Length = 760
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = -3
Query: 534 PGTRPRTRPAATQSSALTDTPTTSRLASITT 442
P T PRT P +T +S + TP TS L+S T+
Sbjct: 525 PST-PRTNPLSTATSKIPSTPRTSLLSSSTS 554
>01_01_1115 +
8828544-8828620,8829608-8829779,8829873-8830183,
8830934-8830983,8832349-8832405,8832742-8832761,
8834637-8835236,8835283-8836002
Length = 668
Score = 30.3 bits (65), Expect = 1.8
Identities = 29/110 (26%), Positives = 41/110 (37%), Gaps = 14/110 (12%)
Frame = -2
Query: 754 HCHHDADELIIGGTDAGVNEYPH--------MVLLGYGDDVA----NIQWLCGGVLIS-- 617
HCH+ EL++G D + + +LL Y DVA + + CGG ++
Sbjct: 306 HCHNQGAELVVGEADVALASLDYGTVGASVGKILLPYAGDVALSVQVVSFACGGFTVAWG 365
Query: 616 ERFVLTAGHCLSSREVGAVRYVYIGALARHETTNPSRRYAVIRAHRHPDY 467
V+ G LS G LA N R +V R P Y
Sbjct: 366 TNHVVVDGSALSMLVSAWSELARSGTLAAGARPNHDR--SVFRPRSPPSY 413
>01_01_1113 - 8815890-8816609,8816656-8817318
Length = 460
Score = 30.3 bits (65), Expect = 1.8
Identities = 29/110 (26%), Positives = 41/110 (37%), Gaps = 14/110 (12%)
Frame = -2
Query: 754 HCHHDADELIIGGTDAGVNEYPH--------MVLLGYGDDVA----NIQWLCGGVLIS-- 617
HCH+ EL++G D + + +LL Y DVA + + CGG ++
Sbjct: 98 HCHNQGAELVVGEADVALASLDYGTVGASVGKILLPYAGDVALSVQVVSFACGGFTVAWG 157
Query: 616 ERFVLTAGHCLSSREVGAVRYVYIGALARHETTNPSRRYAVIRAHRHPDY 467
V+ G LS G LA N R +V R P Y
Sbjct: 158 TNHVVVDGSALSMLVSAWSELARSGTLAAGARPNHDR--SVFRPRSPPSY 205
>11_06_0532 - 24726763-24727033,24729113-24729657
Length = 271
Score = 29.9 bits (64), Expect = 2.3
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 14/72 (19%)
Frame = -2
Query: 754 HCHHDADELIIGGTD--------AGVNEYPHMVLLGYGDDV-ANIQWL---CGG--VLIS 617
HCH+ EL++G D AG++ +LL Y DDV ++Q L CGG V+
Sbjct: 105 HCHNQGAELVVGEVDAALGSLDFAGMDGSLRRILLPYPDDVMLSVQLLRFACGGFSVVWG 164
Query: 616 ERFVLTAGHCLS 581
+ GH +S
Sbjct: 165 NNHLPNDGHGIS 176
>09_02_0082 - 4060018-4061604
Length = 528
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Frame = -1
Query: 632 GGAHQ*ALRAHSRTLPIQ*RGWRSQIRVYRSPRP--ARDHEPVPPLRSHPRSQTP 474
GGA + H+ T P+ R +RV R PR P PP+ + P TP
Sbjct: 299 GGASSSSAMPHAATAPLALRTPAPHLRVSRKPRSLVLTPPAPAPPVATPPTPATP 353
>06_03_0395 - 20354713-20355570
Length = 285
Score = 29.9 bits (64), Expect = 2.3
Identities = 24/79 (30%), Positives = 31/79 (39%)
Frame = -3
Query: 522 PRTRPAATQSSALTDTPTTSRLASITTSRC*S*IDRSRWTSTQSRRVCTRETPSMTSGPP 343
P + AA S + T P T+ A++T R R T + R PP
Sbjct: 77 PPPQTAAAPSPSTTKQPATA--AAVTNRR------RQPTTQIRPRAAVDAADRGRRRQPP 128
Query: 342 PPAGDSPRTGAPRRTCCRR 286
PP +P AP CCRR
Sbjct: 129 PPT--APPLEAPANGCCRR 145
>03_04_0052 - 16859200-16860060
Length = 286
Score = 29.9 bits (64), Expect = 2.3
Identities = 31/103 (30%), Positives = 40/103 (38%), Gaps = 9/103 (8%)
Frame = -3
Query: 597 PDTAYPVERLAQSDTCISEP---SPGTRPRTRPAATQSSALTDTPTTSRLASITTSRC*S 427
P A P A +D S P S R RP +SSA S+LA +
Sbjct: 86 PAPAPPPRHHAAADDDASPPVAASSAASSRRRPQRPRSSAAVVVWRPSKLAVVDVLHVDD 145
Query: 426 *IDRSRWTSTQSRRVCTRETPSM--TSGPP----PPAGDSPRT 316
D S + RR R P+M T PP PPAG+ ++
Sbjct: 146 EDDGSDGDRRRRRRPAQRHEPAMATTMAPPPIALPPAGEEKQS 188
>10_08_0962 +
21880919-21880983,21881100-21881487,21881807-21881931,
21882374-21882374,21882891-21883115,21888956-21889083,
21889176-21889227,21890205-21890351,21890444-21890566,
21890648-21890722,21890812-21890931,21892546-21892632,
21893115-21893183,21893262-21893353,21893465-21893584,
21893725-21893767,21893848-21893910,21894091-21894162,
21894247-21894291,21894354-21894424,21894508-21894573,
21894715-21894799
Length = 753
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -3
Query: 543 EPSPGTRPRTRPAATQSSALTDTPTTSRLAS 451
+PS RP RP A+QSSA P S A+
Sbjct: 19 DPSVSARPSDRPVASQSSARPPFPAASAAAA 49
>04_03_0572 +
17310729-17310746,17312209-17312902,17312991-17313400,
17325755-17326063
Length = 476
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = -1
Query: 302 GRAAEGGTN*VHVDGMLREVPDQSQHEARVRPSDSDVLRRQDIVQRHLSGR*RRSY 135
G +G N V +GM DQ+++EAR D V+ ++ R +GR R Y
Sbjct: 221 GEEVDGLPNLVLPEGMNTLTLDQAENEARRMIGDVSVVEYSQLLTRQEAGRANRVY 276
>04_01_0034 - 401208-402923
Length = 571
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -3
Query: 375 RETPSMTSGPPPPAGDSPRTGAPRRTCCR 289
R PS PPPP PR AP C R
Sbjct: 316 RAKPSRPPPPPPPLDPPPRAAAPPAKCKR 344
>05_01_0544 - 4740460-4740493,4742042-4743033
Length = 341
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +2
Query: 452 LARRLVVGVSVSADDCVAAGRVRGLVPGEGSDIHVSD 562
LARRLV G V A CV R + P + ++ V +
Sbjct: 26 LARRLVHGAGVRATVCVPVSAFRKMFPADDGEVVVEE 62
>01_05_0048 - 17561963-17563585
Length = 540
Score = 29.1 bits (62), Expect = 4.1
Identities = 18/37 (48%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Frame = +3
Query: 282 TTFCSTSDVEPRFSVSPQPVAEARS---SLTASPVCR 383
TT S SDVEPRF+V P E + S A VCR
Sbjct: 61 TTVGSESDVEPRFTVVPGAAQEGLAPGVSEAAERVCR 97
>11_01_0370 +
2814888-2814979,2815450-2815620,2815753-2815834,
2816275-2816316,2816397-2816456,2816817-2816913,
2817382-2819024,2819155-2819256,2819369-2819509,
2819625-2819750,2819935-2820096
Length = 905
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -3
Query: 558 DTCISEPSPGTRPRTRPAATQSSALTDTPTTSRLASITTSRC 433
D IS +P + + +A+ ++LTD P TS L S +C
Sbjct: 579 DAVISNVNPAGKQSSDDSASCKTSLTDIPATSYLCSKEMKQC 620
>08_01_0656 +
5652383-5653009,5653260-5653736,5654969-5655289,
5655434-5655589,5656062-5656127,5656196-5656315
Length = 588
Score = 28.7 bits (61), Expect = 5.4
Identities = 21/66 (31%), Positives = 28/66 (42%)
Frame = -3
Query: 522 PRTRPAATQSSALTDTPTTSRLASITTSRC*S*IDRSRWTSTQSRRVCTRETPSMTSGPP 343
PR +P+ +AL T + T+ C S R RW + C+ TSGPP
Sbjct: 7 PRRKPSRPAGAALRKTGSAPSPTRSCTTSCRS-CGRGRWRAP----ACS-PAAGATSGPP 60
Query: 342 PPAGDS 325
PA S
Sbjct: 61 RPASTS 66
>05_06_0186 -
26207298-26208548,26208743-26208853,26209286-26209507,
26209623-26209658
Length = 539
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = -3
Query: 417 RSRWTSTQSRRVCTRETPSMTSGPPPPAGDSPRTGAPR-RTCCR 289
+S+ +T RR + T PPPP G PR AP CR
Sbjct: 13 KSQGPTTARRRPLRLLPGNRTPHPPPPQGSRPRKPAPTPAAACR 56
>03_06_0106 - 31682200-31682775
Length = 191
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
Frame = +3
Query: 594 PAVSTKR----SLMSTPPHSHWMFATSSP*PSRTMCGYSLT 704
P ST R S S PP S W S P P R+ G++LT
Sbjct: 107 PPTSTSRGRATSHSSAPPRSCWTLTASHP-PPRSAAGFALT 146
>02_02_0353 + 9276316-9276518,9276915-9277314
Length = 200
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Frame = -3
Query: 420 DRSRWTSTQSRRV-CTRETPSMTSGPPPPAGDSPRTGAPRRTCCR 289
DRSR + RR C +P + PPP R G R CCR
Sbjct: 156 DRSRSRHRRRRRRWCPSSSPRRSPAPPPGRACKGRRGG-RTRCCR 199
>09_04_0717 +
19706160-19706327,19707036-19707157,19707408-19707510,
19707644-19707734,19707960-19708132,19708534-19708622,
19708995-19709085,19709272-19709361,19709807-19709854,
19710033-19710104,19710181-19710274,19710350-19710494,
19710809-19710951,19711601-19711751,19712276-19712449,
19712799-19712874
Length = 609
Score = 28.3 bits (60), Expect = 7.1
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = +2
Query: 449 ILARRLVVGVSVSADDCVA-AGRVRGLVPGEGSDIHVSDCANLSTG*AVSGCEHEALT 619
+L R +S +DD A VR V + +HV DC L+ G GC A++
Sbjct: 90 VLLRHYKWSISKLSDDWFADEENVRRSVGLPSNVVHVPDCPELTCGICFEGCAANAMS 147
>07_03_1572 -
27815760-27815819,27816374-27816494,27816580-27816620,
27816737-27816797,27817549-27817635,27817728-27817855,
27817935-27818050,27820671-27820789,27820892-27820983,
27821082-27821169,27822523-27822902
Length = 430
Score = 28.3 bits (60), Expect = 7.1
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = -2
Query: 757 KHCHHDADELIIGGTDAGVNEYPHMVLLGYGDDVANIQW 641
+H + AD + + +A + MVLLG+ DDV ++ W
Sbjct: 147 QHFNFTADSMWLVEYNAALASVCFMVLLGFIDDVLDVPW 185
>06_01_0882 +
6759378-6759707,6759837-6760488,6760609-6760673,
6761363-6761440,6761523-6761633,6761739-6761783,
6762200-6762373,6762841-6763797
Length = 803
Score = 28.3 bits (60), Expect = 7.1
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 366 PSMTSGPPPPAGDSPRTGAP 307
P T+ PPP G +PR+ AP
Sbjct: 212 PDATAPAPPPPGSNPRSSAP 231
>03_06_0599 + 34984869-34985319,34986581-34987563
Length = 477
Score = 28.3 bits (60), Expect = 7.1
Identities = 13/39 (33%), Positives = 17/39 (43%)
Frame = -3
Query: 423 IDRSRWTSTQSRRVCTRETPSMTSGPPPPAGDSPRTGAP 307
+D +RW ST S+ P PPPP T +P
Sbjct: 382 LDCNRWVSTSSQSGPAPPPPPQPPPPPPPPPHQRETPSP 420
>03_03_0126 + 14665374-14665539,14665790-14666127
Length = 167
Score = 28.3 bits (60), Expect = 7.1
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = +3
Query: 528 CRARAPIYTYLTAPTSLLDRQCPAVSTKRSLMSTPP 635
CR RA T A T+L RQCP R + PP
Sbjct: 99 CRERATSTTTTVAATTLGHRQCPWPPPPRGGLLVPP 134
>02_05_0425 -
28845707-28846189,28846262-28846403,28846496-28846971,
28848817-28848848,28849429-28849572,28849770-28849841,
28850281-28850296
Length = 454
Score = 28.3 bits (60), Expect = 7.1
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = -3
Query: 402 STQSRRVCTRETPSMTSGPPPPAGDSPRTGAPR 304
S SR TRE+P+M PPPP P +GA R
Sbjct: 297 SFYSRVGSTRESPAMMMPPPPPL---PSSGAGR 326
>07_03_0808 - 21668100-21669092
Length = 330
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = -1
Query: 545 RSPRPARDHEPVPPLRSHPRSQTPR 471
R PR AR H+ P LR P S PR
Sbjct: 140 RRPRRARGHQHQPALRHLPPSTAPR 164
>05_03_0206 -
10049244-10049360,10057973-10058367,10058456-10059011,
10078853-10079032
Length = 415
Score = 27.9 bits (59), Expect = 9.4
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = -1
Query: 302 GRAAEGGTN*VHVDGMLREVPDQSQHEARVRPSDSDVLRRQDIVQRHLSGR*RRSY 135
G+ +G N + +G+ DQ++ EAR D V+ ++ R +GR R Y
Sbjct: 229 GKEVDGLPNLILPEGVNMLTLDQAEAEARRMIGDVSVVEYSQLLTRQAAGRANRVY 284
>03_02_0786 -
11169820-11170158,11170245-11170433,11171173-11171469,
11171568-11171630,11171884-11171997,11173011-11173091,
11173176-11173307,11174265-11174363,11174453-11174530,
11174641-11174901
Length = 550
Score = 27.9 bits (59), Expect = 9.4
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = -3
Query: 411 RWTSTQSRRVCTRETPSMTSGPPPPAGDSPRTGAP 307
R +++ + R+ +R P PPPP G P P
Sbjct: 9 RQSASSATRMASRARPGFPVAPPPPMGPPPPPPMP 43
>02_04_0544 -
23768808-23768910,23769005-23769030,23769379-23769497,
23769542-23769668,23769842-23769905,23769981-23770095,
23770867-23771101,23771196-23771382,23771948-23772305,
23772432-23772465
Length = 455
Score = 27.9 bits (59), Expect = 9.4
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -3
Query: 363 SMTSGPPPPAGDSPRTGAPRRTCCRRWY 280
S+ SGPP P G +P P+ C ++
Sbjct: 19 SVWSGPPYPTGSAPPVRLPKTACSATYF 46
>01_07_0176 - 41733845-41734834,41736058-41736588
Length = 506
Score = 27.9 bits (59), Expect = 9.4
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +2
Query: 311 APVLGESPAGGGG 349
AP+ GESP GGGG
Sbjct: 434 APIYGESPGGGGG 446
>01_06_1765 + 39735629-39736240
Length = 203
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = -3
Query: 411 RWTSTQSRRV-CTRETPSMTSGPPPPAGDSPRTG 313
RW + V C+++ P S PPPP + R G
Sbjct: 76 RWFEEEREPVICSKKKPEPCSAPPPPPPPANRNG 109
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,492,082
Number of Sequences: 37544
Number of extensions: 641522
Number of successful extensions: 3458
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 3074
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3445
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2063219900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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