Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12g04f
(641 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC130316-1|AAI30317.1| 196|Homo sapiens interleukin 28B (interf... 30 8.0
BC130314-1|AAI30315.1| 196|Homo sapiens interleukin 28B (interf... 30 8.0
BC126183-1|AAI26184.1| 200|Homo sapiens interleukin 29 (interfe... 30 8.0
BC117482-1|AAI17483.1| 200|Homo sapiens interleukin 29 (interfe... 30 8.0
BC074985-1|AAH74985.1| 200|Homo sapiens interleukin 29 (interfe... 30 8.0
AY336717-1|AAQ01561.1| 196|Homo sapiens interleukin 28C protein. 30 8.0
AY336716-1|AAR24511.1| 200|Homo sapiens interleukin 29 protein. 30 8.0
AY336714-1|AAR24509.1| 196|Homo sapiens interleukin 28B protein. 30 8.0
AY184372-1|AAN86125.1| 200|Homo sapiens interferon-lambda1 prot... 30 8.0
AY129150-1|AAN28265.1| 200|Homo sapiens interleukin 29 protein. 30 8.0
AY129149-1|AAN28264.1| 200|Homo sapiens interleukin 28B protein. 30 8.0
>BC130316-1|AAI30317.1| 196|Homo sapiens interleukin 28B
(interferon, lambda 3) protein.
Length = 196
Score = 29.9 bits (64), Expect = 8.0
Identities = 13/20 (65%), Positives = 13/20 (65%), Gaps = 1/20 (5%)
Frame = +1
Query: 556 QPQ*ALPPR-RGRAHHWRHR 612
QPQ PR RGR HHW HR
Sbjct: 138 QPQPTAGPRTRGRLHHWLHR 157
>BC130314-1|AAI30315.1| 196|Homo sapiens interleukin 28B
(interferon, lambda 3) protein.
Length = 196
Score = 29.9 bits (64), Expect = 8.0
Identities = 13/20 (65%), Positives = 13/20 (65%), Gaps = 1/20 (5%)
Frame = +1
Query: 556 QPQ*ALPPR-RGRAHHWRHR 612
QPQ PR RGR HHW HR
Sbjct: 138 QPQPTAGPRTRGRLHHWLHR 157
>BC126183-1|AAI26184.1| 200|Homo sapiens interleukin 29
(interferon, lambda 1) protein.
Length = 200
Score = 29.9 bits (64), Expect = 8.0
Identities = 13/20 (65%), Positives = 13/20 (65%), Gaps = 1/20 (5%)
Frame = +1
Query: 556 QPQ*ALPPR-RGRAHHWRHR 612
QPQ PR RGR HHW HR
Sbjct: 133 QPQPTAGPRPRGRLHHWLHR 152
>BC117482-1|AAI17483.1| 200|Homo sapiens interleukin 29
(interferon, lambda 1) protein.
Length = 200
Score = 29.9 bits (64), Expect = 8.0
Identities = 13/20 (65%), Positives = 13/20 (65%), Gaps = 1/20 (5%)
Frame = +1
Query: 556 QPQ*ALPPR-RGRAHHWRHR 612
QPQ PR RGR HHW HR
Sbjct: 133 QPQPTAGPRPRGRLHHWLHR 152
>BC074985-1|AAH74985.1| 200|Homo sapiens interleukin 29
(interferon, lambda 1) protein.
Length = 200
Score = 29.9 bits (64), Expect = 8.0
Identities = 13/20 (65%), Positives = 13/20 (65%), Gaps = 1/20 (5%)
Frame = +1
Query: 556 QPQ*ALPPR-RGRAHHWRHR 612
QPQ PR RGR HHW HR
Sbjct: 133 QPQPTAGPRPRGRLHHWLHR 152
>AY336717-1|AAQ01561.1| 196|Homo sapiens interleukin 28C protein.
Length = 196
Score = 29.9 bits (64), Expect = 8.0
Identities = 13/20 (65%), Positives = 13/20 (65%), Gaps = 1/20 (5%)
Frame = +1
Query: 556 QPQ*ALPPR-RGRAHHWRHR 612
QPQ PR RGR HHW HR
Sbjct: 138 QPQPTAGPRTRGRLHHWPHR 157
>AY336716-1|AAR24511.1| 200|Homo sapiens interleukin 29 protein.
Length = 200
Score = 29.9 bits (64), Expect = 8.0
Identities = 13/20 (65%), Positives = 13/20 (65%), Gaps = 1/20 (5%)
Frame = +1
Query: 556 QPQ*ALPPR-RGRAHHWRHR 612
QPQ PR RGR HHW HR
Sbjct: 133 QPQPTAGPRPRGRLHHWLHR 152
>AY336714-1|AAR24509.1| 196|Homo sapiens interleukin 28B protein.
Length = 196
Score = 29.9 bits (64), Expect = 8.0
Identities = 13/20 (65%), Positives = 13/20 (65%), Gaps = 1/20 (5%)
Frame = +1
Query: 556 QPQ*ALPPR-RGRAHHWRHR 612
QPQ PR RGR HHW HR
Sbjct: 138 QPQPTAGPRTRGRLHHWLHR 157
>AY184372-1|AAN86125.1| 200|Homo sapiens interferon-lambda1
protein.
Length = 200
Score = 29.9 bits (64), Expect = 8.0
Identities = 13/20 (65%), Positives = 13/20 (65%), Gaps = 1/20 (5%)
Frame = +1
Query: 556 QPQ*ALPPR-RGRAHHWRHR 612
QPQ PR RGR HHW HR
Sbjct: 133 QPQPTAGPRPRGRLHHWLHR 152
>AY129150-1|AAN28265.1| 200|Homo sapiens interleukin 29 protein.
Length = 200
Score = 29.9 bits (64), Expect = 8.0
Identities = 13/20 (65%), Positives = 13/20 (65%), Gaps = 1/20 (5%)
Frame = +1
Query: 556 QPQ*ALPPR-RGRAHHWRHR 612
QPQ PR RGR HHW HR
Sbjct: 133 QPQPTAGPRPRGRLHHWLHR 152
>AY129149-1|AAN28264.1| 200|Homo sapiens interleukin 28B protein.
Length = 200
Score = 29.9 bits (64), Expect = 8.0
Identities = 13/20 (65%), Positives = 13/20 (65%), Gaps = 1/20 (5%)
Frame = +1
Query: 556 QPQ*ALPPR-RGRAHHWRHR 612
QPQ PR RGR HHW HR
Sbjct: 142 QPQPTAGPRTRGRLHHWLHR 161
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,549,906
Number of Sequences: 237096
Number of extensions: 1747139
Number of successful extensions: 3853
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3650
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3853
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7085195460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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