Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12g01r
(757 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC112897-1|AAI12898.1| 906|Homo sapiens CLEC16A protein protein. 34 0.48
AB002348-1|BAA20807.3| 1062|Homo sapiens KIAA0350 protein protein. 34 0.48
BC051738-1|AAH51738.1| 696|Homo sapiens SLIT and NTRK-like fami... 33 0.84
AY358289-1|AAQ88656.1| 696|Homo sapiens LLWI233 protein. 33 1.1
AL355481-1|CAC37488.1| 696|Homo sapiens SLIT and NTRK-like fami... 33 1.1
AB067497-1|BAB67803.1| 760|Homo sapiens KIAA1910 protein protein. 33 1.1
X78578-1|CAA55316.1| 1121|Homo sapiens serine /threonine specifi... 31 4.5
BC126453-1|AAI26454.1| 1122|Homo sapiens protein phosphatase 1, ... 31 4.5
BC126451-1|AAI26452.1| 1122|Homo sapiens protein phosphatase 1, ... 31 4.5
AF024578-1|AAB94596.1| 1122|Homo sapiens type-1 protein phosphat... 31 4.5
AC093598-1|AAP22361.1| 260|Homo sapiens unknown protein. 31 4.5
AB065441-1|BAC05708.1| 309|Homo sapiens seven transmembrane hel... 30 7.8
>BC112897-1|AAI12898.1| 906|Homo sapiens CLEC16A protein protein.
Length = 906
Score = 34.3 bits (75), Expect = 0.48
Identities = 23/81 (28%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Frame = +3
Query: 456 IYNIDNAKFLFYYFQKEYVLLE----LVIINIKNKKSVFIAILTNNNKIVEIQLFLS-FV 620
I+++D+ K+L++ K + E L++ I++ + I N++ + + L + FV
Sbjct: 20 IHSLDHLKYLYHVLTKNTTVTEQNRNLLVETIRSITEILIWGDQNDSSVFDFFLEKNMFV 79
Query: 621 FFLTITKQKQSKY*ALCFPLL 683
FFL I +QK +Y +C LL
Sbjct: 80 FFLNILRQKSGRY--VCVQLL 98
>AB002348-1|BAA20807.3| 1062|Homo sapiens KIAA0350 protein protein.
Length = 1062
Score = 34.3 bits (75), Expect = 0.48
Identities = 23/81 (28%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Frame = +3
Query: 456 IYNIDNAKFLFYYFQKEYVLLE----LVIINIKNKKSVFIAILTNNNKIVEIQLFLS-FV 620
I+++D+ K+L++ K + E L++ I++ + I N++ + + L + FV
Sbjct: 29 IHSLDHLKYLYHVLTKNTTVTEQNRNLLVETIRSITEILIWGDQNDSSVFDFFLEKNMFV 88
Query: 621 FFLTITKQKQSKY*ALCFPLL 683
FFL I +QK +Y +C LL
Sbjct: 89 FFLNILRQKSGRY--VCVQLL 107
>BC051738-1|AAH51738.1| 696|Homo sapiens SLIT and NTRK-like family,
member 1 protein.
Length = 696
Score = 33.5 bits (73), Expect = 0.84
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Frame = +2
Query: 203 IYNIRE-HFLNFANLITLSCHKNKIHKDQTSKIRSILCSRHYFSNKKLADE-ARDYRYSL 376
I++IR+ HF+++ NLI L N I + + +++L R + + D +R+ L
Sbjct: 387 IHSIRKSHFVDYKNLILLDLGNNNIATVENNSFKNLLDLRWLYMDSNYLDTLSREKFAGL 446
Query: 377 HTYKYINT-YNSI 412
+Y+N YN+I
Sbjct: 447 QNLEYLNVEYNAI 459
>AY358289-1|AAQ88656.1| 696|Homo sapiens LLWI233 protein.
Length = 696
Score = 33.1 bits (72), Expect = 1.1
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Frame = +2
Query: 203 IYNIRE-HFLNFANLITLSCHKNKIHKDQTSKIRSILCSRHYFSNKKLADE-ARDYRYSL 376
I++IR+ HF+++ NLI L N I + + +++L R + + D +R+ L
Sbjct: 387 IHSIRKSHFVDYKNLILLDLGNNNIATVENNTFKNLLDLRWLYMDSNYLDTLSREKFAGL 446
Query: 377 HTYKYINT-YNSI 412
+Y+N YN+I
Sbjct: 447 QNLEYLNVEYNAI 459
>AL355481-1|CAC37488.1| 696|Homo sapiens SLIT and NTRK-like family,
member 1 protein.
Length = 696
Score = 33.1 bits (72), Expect = 1.1
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Frame = +2
Query: 203 IYNIRE-HFLNFANLITLSCHKNKIHKDQTSKIRSILCSRHYFSNKKLADE-ARDYRYSL 376
I++IR+ HF+++ NLI L N I + + +++L R + + D +R+ L
Sbjct: 387 IHSIRKSHFVDYKNLILLDLGNNNIATVENNTFKNLLDLRWLYMDSNYLDTLSREKFAGL 446
Query: 377 HTYKYINT-YNSI 412
+Y+N YN+I
Sbjct: 447 QNLEYLNVEYNAI 459
>AB067497-1|BAB67803.1| 760|Homo sapiens KIAA1910 protein protein.
Length = 760
Score = 33.1 bits (72), Expect = 1.1
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Frame = +2
Query: 203 IYNIRE-HFLNFANLITLSCHKNKIHKDQTSKIRSILCSRHYFSNKKLADE-ARDYRYSL 376
I++IR+ HF+++ NLI L N I + + +++L R + + D +R+ L
Sbjct: 451 IHSIRKSHFVDYKNLILLDLGNNNIATVENNTFKNLLDLRWLYMDSNYLDTLSREKFAGL 510
Query: 377 HTYKYINT-YNSI 412
+Y+N YN+I
Sbjct: 511 QNLEYLNVEYNAI 523
>X78578-1|CAA55316.1| 1121|Homo sapiens serine /threonine specific
protein phosphatase protein.
Length = 1121
Score = 31.1 bits (67), Expect = 4.5
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = -3
Query: 476 GIINVVNVKFKKLHKIVSCLSILNCRYLYICKYVMNTCN 360
GII V+NV F+KL + L Y + +YV N+C+
Sbjct: 143 GIIRVLNVSFEKLVYVRMSLDDWQTHYDILAEYVPNSCD 181
>BC126453-1|AAI26454.1| 1122|Homo sapiens protein phosphatase 1,
regulatory (inhibitor) subunit 3A (glycogen and sarcopla
protein.
Length = 1122
Score = 31.1 bits (67), Expect = 4.5
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = -3
Query: 476 GIINVVNVKFKKLHKIVSCLSILNCRYLYICKYVMNTCN 360
GII V+NV F+KL + L Y + +YV N+C+
Sbjct: 144 GIIRVLNVSFEKLVYVRMSLDDWQTHYDILAEYVPNSCD 182
>BC126451-1|AAI26452.1| 1122|Homo sapiens protein phosphatase 1,
regulatory (inhibitor) subunit 3A (glycogen and sarcopla
protein.
Length = 1122
Score = 31.1 bits (67), Expect = 4.5
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = -3
Query: 476 GIINVVNVKFKKLHKIVSCLSILNCRYLYICKYVMNTCN 360
GII V+NV F+KL + L Y + +YV N+C+
Sbjct: 144 GIIRVLNVSFEKLVYVRMSLDDWQTHYDILAEYVPNSCD 182
>AF024578-1|AAB94596.1| 1122|Homo sapiens type-1 protein phosphatase
skeletal muscle glycogen targeting subunit protein.
Length = 1122
Score = 31.1 bits (67), Expect = 4.5
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = -3
Query: 476 GIINVVNVKFKKLHKIVSCLSILNCRYLYICKYVMNTCN 360
GII V+NV F+KL + L Y + +YV N+C+
Sbjct: 144 GIIRVLNVSFEKLVYVRMSLDDWQTHYDILAEYVPNSCD 182
>AC093598-1|AAP22361.1| 260|Homo sapiens unknown protein.
Length = 260
Score = 31.1 bits (67), Expect = 4.5
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = -3
Query: 476 GIINVVNVKFKKLHKIVSCLSILNCRYLYICKYVMNTCN 360
GII V+NV F+KL + L Y + +YV N+C+
Sbjct: 144 GIIRVLNVSFEKLVYVRMSLDDWQTHYDILAEYVPNSCD 182
>AB065441-1|BAC05708.1| 309|Homo sapiens seven transmembrane helix
receptor protein.
Length = 309
Score = 30.3 bits (65), Expect = 7.8
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 7/71 (9%)
Frame = +3
Query: 489 YYFQKEYVLLELVIINIKNKKSVFIAILTNNN-----KIVEIQLFLSFVF--FLTITKQK 647
Y+F K L+L +I++ KS+ +++ NN+ + ++ L LS L +T
Sbjct: 58 YFFLKNLSFLDLCLISVTAPKSIANSLIHNNSISFLGCVSQVFLLLSSASAELLLLTVMS 117
Query: 648 QSKY*ALCFPL 680
+Y A+C PL
Sbjct: 118 FDRYTAICHPL 128
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,941,609
Number of Sequences: 237096
Number of extensions: 1730944
Number of successful extensions: 6087
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 5960
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6087
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9127122082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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