Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12g01f
(616 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC047932-1|AAH47932.1| 437|Homo sapiens vacuolar protein sortin... 158 1e-38
AF282903-1|AAG01470.1| 437|Homo sapiens vacuolar protein sortin... 158 1e-38
AF255952-1|AAK52408.1| 437|Homo sapiens vacuolar protein sortin... 158 1e-38
AF159063-1|AAD49227.1| 437|Homo sapiens SKD1-homolog protein. 158 1e-38
AF112215-1|AAF17203.1| 437|Homo sapiens SKD1 protein protein. 158 1e-38
AF155740-1|AAD42971.1| 432|Homo sapiens vacuolar sorting protei... 155 2e-37
BC039574-1|AAH39574.1| 444|Homo sapiens vacuolar protein sortin... 141 2e-33
AY232629-1|AAP59551.1| 444|Homo sapiens cell migration-inducing... 141 2e-33
AF282904-1|AAG01471.1| 444|Homo sapiens vacuolar protein sortin... 141 2e-33
AF195514-1|AAG33022.1| 444|Homo sapiens VPS4-2 ATPase protein. 141 2e-33
AF132747-1|AAL75948.1| 437|Homo sapiens SKD2 protein protein. 138 2e-32
BC009692-1|AAH09692.1| 81|Homo sapiens VPS4B protein protein. 105 9e-23
BC004540-1|AAH04540.1| 541|Homo sapiens RPS6KL1 protein protein. 42 0.002
AC006530-3|AAD30182.1| 549|Homo sapiens unknown protein. 42 0.002
BC056202-1|AAH56202.1| 813|Homo sapiens calpain 7 protein. 40 0.007
AB028639-1|BAA78730.1| 813|Homo sapiens PalBH protein. 40 0.007
BC104769-1|AAI04770.1| 1066|Homo sapiens ribosomal protein S6 ki... 39 0.012
AL645860-2|CAH70704.1| 1054|Homo sapiens ribosomal protein S6 ki... 39 0.012
AL645860-1|CAH70703.1| 1066|Homo sapiens ribosomal protein S6 ki... 39 0.012
AL583826-2|CAH73805.1| 1054|Homo sapiens ribosomal protein S6 ki... 39 0.012
AL583826-1|CAH73804.1| 1066|Homo sapiens ribosomal protein S6 ki... 39 0.012
AL512449-2|CAH72000.1| 1054|Homo sapiens ribosomal protein S6 ki... 39 0.012
AL512449-1|CAH71999.1| 1066|Homo sapiens ribosomal protein S6 ki... 39 0.012
AK054800-1|BAB70808.1| 255|Homo sapiens protein ( Homo sapiens ... 39 0.012
AF477978-1|AAL84818.1| 1066|Homo sapiens RSK-like protein protein. 39 0.012
AB070706-1|BAB63956.1| 1066|Homo sapiens RSK-like protein protein. 38 0.037
BC073998-1|AAH73998.1| 287|Homo sapiens ATAD1 protein protein. 36 0.15
BC063530-1|AAH63530.1| 330|Homo sapiens ATAD1 protein protein. 36 0.15
AL133327-1|CAI16701.1| 361|Homo sapiens ATPase family, AAA doma... 36 0.15
AK075223-1|BAC11482.1| 361|Homo sapiens protein ( Homo sapiens ... 36 0.15
BC034999-1|AAH34999.2| 466|Homo sapiens katanin p60 subunit A-l... 35 0.20
BX276089-3|CAI16433.1| 280|Homo sapiens katanin p60 (ATPase-con... 32 1.8
BX276089-2|CAI16431.1| 491|Homo sapiens katanin p60 (ATPase-con... 32 1.8
AL078581-3|CAI19506.1| 280|Homo sapiens katanin p60 (ATPase-con... 32 1.8
AL078581-2|CAI19505.1| 491|Homo sapiens katanin p60 (ATPase-con... 32 1.8
AF056022-1|AAC25114.1| 491|Homo sapiens p60 katanin protein. 32 1.8
BC048217-1|AAH48217.1| 695|Homo sapiens SPATA5 protein protein. 29 9.9
AK091384-1|BAC03651.1| 893|Homo sapiens protein ( Homo sapiens ... 29 9.9
AF479656-1|AAM43608.1| 790|Homo sapiens spermatogenesis associa... 29 9.9
AF361489-1|AAM00262.1| 893|Homo sapiens spermatogenesis associa... 29 9.9
>BC047932-1|AAH47932.1| 437|Homo sapiens vacuolar protein sorting 4
homolog A (S. cerevisiae) protein.
Length = 437
Score = 158 bits (384), Expect = 1e-38
Identities = 82/154 (53%), Positives = 95/154 (61%)
Frame = +3
Query: 153 MTSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAK 332
MT+S TLQKAIDLVTKATEEDK KNYEEALRLY+H VEYFLHA+KYEA ++AKESIRAK
Sbjct: 1 MTTS-TLQKAIDLVTKATEEDKAKNYEEALRLYQHAVEYFLHAIKYEAHSDKAKESIRAK 59
Query: 333 CLQYLDRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQGKLEGAIVV 512
C+QYLDRA LQ +L GA+V+
Sbjct: 60 CVQYLDRAEKLKDYLRSKEKHGKKPVKENQSEGKGSDSDSEGDNPEKKKLQEQLMGAVVM 119
Query: 513 EKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLF 614
EKP+++W+DVAG VILPIKFPHLF
Sbjct: 120 EKPNIRWNDVAGLEGAKEALKEAVILPIKFPHLF 153
>AF282903-1|AAG01470.1| 437|Homo sapiens vacuolar protein sorting
factor 4A protein.
Length = 437
Score = 158 bits (384), Expect = 1e-38
Identities = 82/154 (53%), Positives = 95/154 (61%)
Frame = +3
Query: 153 MTSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAK 332
MT+S TLQKAIDLVTKATEEDK KNYEEALRLY+H VEYFLHA+KYEA ++AKESIRAK
Sbjct: 1 MTTS-TLQKAIDLVTKATEEDKAKNYEEALRLYQHAVEYFLHAIKYEAHSDKAKESIRAK 59
Query: 333 CLQYLDRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQGKLEGAIVV 512
C+QYLDRA LQ +L GA+V+
Sbjct: 60 CVQYLDRAEKLKDYLRSKEKHGKKPVKENQSEGKGSDSDSEGDNPEKKKLQEQLMGAVVM 119
Query: 513 EKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLF 614
EKP+++W+DVAG VILPIKFPHLF
Sbjct: 120 EKPNIRWNDVAGLEGAKEALKEAVILPIKFPHLF 153
>AF255952-1|AAK52408.1| 437|Homo sapiens vacuolar protein sorting
VPS4-1 protein.
Length = 437
Score = 158 bits (384), Expect = 1e-38
Identities = 82/154 (53%), Positives = 95/154 (61%)
Frame = +3
Query: 153 MTSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAK 332
MT+S TLQKAIDLVTKATEEDK KNYEEALRLY+H VEYFLHA+KYEA ++AKESIRAK
Sbjct: 1 MTTS-TLQKAIDLVTKATEEDKAKNYEEALRLYQHAVEYFLHAIKYEAHSDKAKESIRAK 59
Query: 333 CLQYLDRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQGKLEGAIVV 512
C+QYLDRA LQ +L GA+V+
Sbjct: 60 CVQYLDRAEKLKDYLRSKEKHGKKPVKENQSEGKGSDSDSEGDNPEKKKLQEQLMGAVVM 119
Query: 513 EKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLF 614
EKP+++W+DVAG VILPIKFPHLF
Sbjct: 120 EKPNIRWNDVAGLEGAKEALKEAVILPIKFPHLF 153
>AF159063-1|AAD49227.1| 437|Homo sapiens SKD1-homolog protein.
Length = 437
Score = 158 bits (384), Expect = 1e-38
Identities = 82/154 (53%), Positives = 95/154 (61%)
Frame = +3
Query: 153 MTSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAK 332
MT+S TLQKAIDLVTKATEEDK KNYEEALRLY+H VEYFLHA+KYEA ++AKESIRAK
Sbjct: 1 MTTS-TLQKAIDLVTKATEEDKAKNYEEALRLYQHAVEYFLHAIKYEAHSDKAKESIRAK 59
Query: 333 CLQYLDRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQGKLEGAIVV 512
C+QYLDRA LQ +L GA+V+
Sbjct: 60 CVQYLDRAEKLKDYLRSKEKHGKKPVKENQSEGKGSDSDSEGDNPEKKKLQEQLMGAVVM 119
Query: 513 EKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLF 614
EKP+++W+DVAG VILPIKFPHLF
Sbjct: 120 EKPNIRWNDVAGLEGAKEALKEAVILPIKFPHLF 153
>AF112215-1|AAF17203.1| 437|Homo sapiens SKD1 protein protein.
Length = 437
Score = 158 bits (384), Expect = 1e-38
Identities = 82/154 (53%), Positives = 95/154 (61%)
Frame = +3
Query: 153 MTSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAK 332
MT+S TLQKAIDLVTKATEEDK KNYEEALRLY+H VEYFLHA+KYEA ++AKESIRAK
Sbjct: 1 MTTS-TLQKAIDLVTKATEEDKAKNYEEALRLYQHAVEYFLHAIKYEAHSDKAKESIRAK 59
Query: 333 CLQYLDRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQGKLEGAIVV 512
C+QYLDRA LQ +L GA+V+
Sbjct: 60 CVQYLDRAEKLKDYLRSKEEHGKKPVKENQSEGKGSDSDSEGDNPEKKKLQEQLMGAVVM 119
Query: 513 EKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLF 614
EKP+++W+DVAG VILPIKFPHLF
Sbjct: 120 EKPNIRWNDVAGLEGAKEALKEAVILPIKFPHLF 153
>AF155740-1|AAD42971.1| 432|Homo sapiens vacuolar sorting protein 4
protein.
Length = 432
Score = 155 bits (375), Expect = 2e-37
Identities = 78/148 (52%), Positives = 90/148 (60%)
Frame = +3
Query: 171 LQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKCLQYLD 350
LQKAIDLVTKATEEDK KNYEEALRLY+H VEYFLHA+KYEA ++AKESIRAKC+QYLD
Sbjct: 1 LQKAIDLVTKATEEDKAKNYEEALRLYQHAVEYFLHAIKYEAHSDKAKESIRAKCVQYLD 60
Query: 351 RAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQGKLEGAIVVEKPHVK 530
RA LQ +L GA+V+EKP+++
Sbjct: 61 RAEKLKDYLRSKEKHGKKPVKENQSEGKGSDSDSEGDNPEKKKLQEQLMGAVVMEKPNIR 120
Query: 531 WSDVAGXXXXXXXXXXXVILPIKFPHLF 614
W+DVAG VILPIKFPHLF
Sbjct: 121 WNDVAGLEGAKEALKEAVILPIKFPHLF 148
>BC039574-1|AAH39574.1| 444|Homo sapiens vacuolar protein sorting 4
homolog B (S. cerevisiae) protein.
Length = 444
Score = 141 bits (342), Expect = 2e-33
Identities = 75/158 (47%), Positives = 91/158 (57%), Gaps = 5/158 (3%)
Frame = +3
Query: 156 TSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKC 335
++S LQKAIDL +KA +EDK NYEEAL+LY+H V+YFLH VKYEAQG++AK+SIRAKC
Sbjct: 3 STSPNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHVVKYEAQGDKAKQSIRAKC 62
Query: 336 LQYLDRAXXXXXXXXXXXXXX-----XXXXXXXXXXXXXXXXXXXXXXXXXXXLQGKLEG 500
+YLDRA LQ +L+G
Sbjct: 63 TEYLDRAEKLKEYLKNKEKKAQKPVKEGQPSPADEKGNDSDGEGESDDPEKKKLQNQLQG 122
Query: 501 AIVVEKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLF 614
AIV+E+P+VKWSDVAG VILPIKFPHLF
Sbjct: 123 AIVIERPNVKWSDVAGLEGAKEALKEAVILPIKFPHLF 160
>AY232629-1|AAP59551.1| 444|Homo sapiens cell migration-inducing 1
protein.
Length = 444
Score = 141 bits (342), Expect = 2e-33
Identities = 75/158 (47%), Positives = 91/158 (57%), Gaps = 5/158 (3%)
Frame = +3
Query: 156 TSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKC 335
++S LQKAIDL +KA +EDK NYEEAL+LY+H V+YFLH VKYEAQG++AK+SIRAKC
Sbjct: 3 STSPNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHVVKYEAQGDKAKQSIRAKC 62
Query: 336 LQYLDRAXXXXXXXXXXXXXX-----XXXXXXXXXXXXXXXXXXXXXXXXXXXLQGKLEG 500
+YLDRA LQ +L+G
Sbjct: 63 TEYLDRAEKLKEYLKNKEKKAQKPVKEGQPSPADEKGNDSDGEGESDDPEKKKLQNQLQG 122
Query: 501 AIVVEKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLF 614
AIV+E+P+VKWSDVAG VILPIKFPHLF
Sbjct: 123 AIVIERPNVKWSDVAGLEGAKEALKEAVILPIKFPHLF 160
>AF282904-1|AAG01471.1| 444|Homo sapiens vacuolar protein sorting
factor 4B protein.
Length = 444
Score = 141 bits (342), Expect = 2e-33
Identities = 75/158 (47%), Positives = 91/158 (57%), Gaps = 5/158 (3%)
Frame = +3
Query: 156 TSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKC 335
++S LQKAIDL +KA +EDK NYEEAL+LY+H V+YFLH VKYEAQG++AK+SIRAKC
Sbjct: 3 STSPNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHVVKYEAQGDKAKQSIRAKC 62
Query: 336 LQYLDRAXXXXXXXXXXXXXX-----XXXXXXXXXXXXXXXXXXXXXXXXXXXLQGKLEG 500
+YLDRA LQ +L+G
Sbjct: 63 TEYLDRAEKLKEYLKNKEKKAQKPVKEGQPSPADEKGNDSDGEGESDDPEKKKLQNQLQG 122
Query: 501 AIVVEKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLF 614
AIV+E+P+VKWSDVAG VILPIKFPHLF
Sbjct: 123 AIVIERPNVKWSDVAGLEGAKEALKEAVILPIKFPHLF 160
>AF195514-1|AAG33022.1| 444|Homo sapiens VPS4-2 ATPase protein.
Length = 444
Score = 141 bits (342), Expect = 2e-33
Identities = 75/158 (47%), Positives = 91/158 (57%), Gaps = 5/158 (3%)
Frame = +3
Query: 156 TSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKC 335
++S LQKAIDL +KA +EDK NYEEAL+LY+H V+YFLH VKYEAQG++AK+SIRAKC
Sbjct: 3 STSPNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHVVKYEAQGDKAKQSIRAKC 62
Query: 336 LQYLDRAXXXXXXXXXXXXXX-----XXXXXXXXXXXXXXXXXXXXXXXXXXXLQGKLEG 500
+YLDRA LQ +L+G
Sbjct: 63 TEYLDRAEKLKEYLKNKEKKAQKPVKEGQPSPADEKGNDSDGEGESDDPEKKKLQNQLQG 122
Query: 501 AIVVEKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLF 614
AIV+E+P+VKWSDVAG VILPIKFPHLF
Sbjct: 123 AIVIERPNVKWSDVAGLEGAKEALKEAVILPIKFPHLF 160
>AF132747-1|AAL75948.1| 437|Homo sapiens SKD2 protein protein.
Length = 437
Score = 138 bits (333), Expect = 2e-32
Identities = 77/154 (50%), Positives = 86/154 (55%)
Frame = +3
Query: 153 MTSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAK 332
MT+S TLQKAIDLVTKATEEDK KNYEEALRLY+H VEYFLHA+KYEA ++AKESIRAK
Sbjct: 1 MTTS-TLQKAIDLVTKATEEDKAKNYEEALRLYQHAVEYFLHAIKYEAHSDKAKESIRAK 59
Query: 333 CLQYLDRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQGKLEGAIVV 512
C+QYLDRA LQ +L GA+V+
Sbjct: 60 CVQYLDRAEKLKDYLRSKEEHGKKPVKENQSEGKGSDSDSEGDNPEKKKLQEQLMGAVVM 119
Query: 513 EKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLF 614
EKP VILPIKFPHLF
Sbjct: 120 EKPQHTVERRGRAGGAKEALKEAVILPIKFPHLF 153
>BC009692-1|AAH09692.1| 81|Homo sapiens VPS4B protein protein.
Length = 81
Score = 105 bits (253), Expect = 9e-23
Identities = 47/67 (70%), Positives = 58/67 (86%)
Frame = +3
Query: 156 TSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKC 335
++S LQKAIDL +KA +EDK NYEEAL+LY+H V+YFLH VKYEAQG++AK+SIRAKC
Sbjct: 3 STSPNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHVVKYEAQGDKAKQSIRAKC 62
Query: 336 LQYLDRA 356
+YLDRA
Sbjct: 63 TEYLDRA 69
>BC004540-1|AAH04540.1| 541|Homo sapiens RPS6KL1 protein protein.
Length = 541
Score = 41.9 bits (94), Expect = 0.002
Identities = 22/68 (32%), Positives = 37/68 (54%)
Frame = +3
Query: 153 MTSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAK 332
MT + L A + A E D +++YE A Y++GV+ L + + ER +E+++ K
Sbjct: 44 MTKRDYLVDAATQIRLALERDVSEDYEAAFNHYQNGVDVLLRGIHVDPNKER-REAVKLK 102
Query: 333 CLQYLDRA 356
+YL RA
Sbjct: 103 ITKYLRRA 110
>AC006530-3|AAD30182.1| 549|Homo sapiens unknown protein.
Length = 549
Score = 41.9 bits (94), Expect = 0.002
Identities = 22/68 (32%), Positives = 37/68 (54%)
Frame = +3
Query: 153 MTSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAK 332
MT + L A + A E D +++YE A Y++GV+ L + + ER +E+++ K
Sbjct: 44 MTKRDYLVDAATQIRLALERDVSEDYEAAFNHYQNGVDVLLRGIHVDPNKER-REAVKLK 102
Query: 333 CLQYLDRA 356
+YL RA
Sbjct: 103 ITKYLRRA 110
>BC056202-1|AAH56202.1| 813|Homo sapiens calpain 7 protein.
Length = 813
Score = 39.9 bits (89), Expect = 0.007
Identities = 22/62 (35%), Positives = 35/62 (56%)
Frame = +3
Query: 171 LQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKCLQYLD 350
L++A LVT+A +ED+ +N E+A+ LY V+ L YE + + ++ Q LD
Sbjct: 87 LERAHFLVTQAFDEDEKENVEDAIELYTEAVDLCL-KTSYETADKVLQNKLKQLARQALD 145
Query: 351 RA 356
RA
Sbjct: 146 RA 147
>AB028639-1|BAA78730.1| 813|Homo sapiens PalBH protein.
Length = 813
Score = 39.9 bits (89), Expect = 0.007
Identities = 22/62 (35%), Positives = 35/62 (56%)
Frame = +3
Query: 171 LQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKCLQYLD 350
L++A LVT+A +ED+ +N E+A+ LY V+ L YE + + ++ Q LD
Sbjct: 87 LERAHFLVTQAFDEDEKENVEDAIELYTEAVDLCL-KTSYETADKVLQNKLKQLARQALD 145
Query: 351 RA 356
RA
Sbjct: 146 RA 147
>BC104769-1|AAI04770.1| 1066|Homo sapiens ribosomal protein S6
kinase, 52kDa, polypeptide 1 protein.
Length = 1066
Score = 39.1 bits (87), Expect = 0.012
Identities = 20/62 (32%), Positives = 37/62 (59%)
Frame = +3
Query: 171 LQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKCLQYLD 350
L+KA +L+ A ++++ +YE A Y GV+ L V+ E+ R +E+++ + +YL
Sbjct: 240 LEKAGELIKLALKKEEEDDYEAASDFYRKGVDLLLEGVQGESSPTR-REAVKRRTAEYLM 298
Query: 351 RA 356
RA
Sbjct: 299 RA 300
>AL645860-2|CAH70704.1| 1054|Homo sapiens ribosomal protein S6
kinase, 52kDa, polypeptide 1 protein.
Length = 1054
Score = 39.1 bits (87), Expect = 0.012
Identities = 20/62 (32%), Positives = 37/62 (59%)
Frame = +3
Query: 171 LQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKCLQYLD 350
L+KA +L+ A ++++ +YE A Y GV+ L V+ E+ R +E+++ + +YL
Sbjct: 228 LEKAGELIKLALKKEEEDDYEAASDFYRKGVDLLLEGVQGESSPTR-REAVKRRTAEYLM 286
Query: 351 RA 356
RA
Sbjct: 287 RA 288
>AL645860-1|CAH70703.1| 1066|Homo sapiens ribosomal protein S6
kinase, 52kDa, polypeptide 1 protein.
Length = 1066
Score = 39.1 bits (87), Expect = 0.012
Identities = 20/62 (32%), Positives = 37/62 (59%)
Frame = +3
Query: 171 LQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKCLQYLD 350
L+KA +L+ A ++++ +YE A Y GV+ L V+ E+ R +E+++ + +YL
Sbjct: 240 LEKAGELIKLALKKEEEDDYEAASDFYRKGVDLLLEGVQGESSPTR-REAVKRRTAEYLM 298
Query: 351 RA 356
RA
Sbjct: 299 RA 300
>AL583826-2|CAH73805.1| 1054|Homo sapiens ribosomal protein S6
kinase, 52kDa, polypeptide 1 protein.
Length = 1054
Score = 39.1 bits (87), Expect = 0.012
Identities = 20/62 (32%), Positives = 37/62 (59%)
Frame = +3
Query: 171 LQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKCLQYLD 350
L+KA +L+ A ++++ +YE A Y GV+ L V+ E+ R +E+++ + +YL
Sbjct: 228 LEKAGELIKLALKKEEEDDYEAASDFYRKGVDLLLEGVQGESSPTR-REAVKRRTAEYLM 286
Query: 351 RA 356
RA
Sbjct: 287 RA 288
>AL583826-1|CAH73804.1| 1066|Homo sapiens ribosomal protein S6
kinase, 52kDa, polypeptide 1 protein.
Length = 1066
Score = 39.1 bits (87), Expect = 0.012
Identities = 20/62 (32%), Positives = 37/62 (59%)
Frame = +3
Query: 171 LQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKCLQYLD 350
L+KA +L+ A ++++ +YE A Y GV+ L V+ E+ R +E+++ + +YL
Sbjct: 240 LEKAGELIKLALKKEEEDDYEAASDFYRKGVDLLLEGVQGESSPTR-REAVKRRTAEYLM 298
Query: 351 RA 356
RA
Sbjct: 299 RA 300
>AL512449-2|CAH72000.1| 1054|Homo sapiens ribosomal protein S6
kinase, 52kDa, polypeptide 1 protein.
Length = 1054
Score = 39.1 bits (87), Expect = 0.012
Identities = 20/62 (32%), Positives = 37/62 (59%)
Frame = +3
Query: 171 LQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKCLQYLD 350
L+KA +L+ A ++++ +YE A Y GV+ L V+ E+ R +E+++ + +YL
Sbjct: 228 LEKAGELIKLALKKEEEDDYEAASDFYRKGVDLLLEGVQGESSPTR-REAVKRRTAEYLM 286
Query: 351 RA 356
RA
Sbjct: 287 RA 288
>AL512449-1|CAH71999.1| 1066|Homo sapiens ribosomal protein S6
kinase, 52kDa, polypeptide 1 protein.
Length = 1066
Score = 39.1 bits (87), Expect = 0.012
Identities = 20/62 (32%), Positives = 37/62 (59%)
Frame = +3
Query: 171 LQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKCLQYLD 350
L+KA +L+ A ++++ +YE A Y GV+ L V+ E+ R +E+++ + +YL
Sbjct: 240 LEKAGELIKLALKKEEEDDYEAASDFYRKGVDLLLEGVQGESSPTR-REAVKRRTAEYLM 298
Query: 351 RA 356
RA
Sbjct: 299 RA 300
>AK054800-1|BAB70808.1| 255|Homo sapiens protein ( Homo sapiens
cDNA FLJ30238 fis, clone BRACE2002050. ).
Length = 255
Score = 39.1 bits (87), Expect = 0.012
Identities = 21/68 (30%), Positives = 36/68 (52%)
Frame = +3
Query: 153 MTSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAK 332
MT + L A + A E +++YE A Y++GV+ L + + ER +E+++ K
Sbjct: 44 MTKRDYLVDAATQIRLALERGVSEDYEAAFNHYQNGVDVLLRGIHVDPNKER-REAVKLK 102
Query: 333 CLQYLDRA 356
+YL RA
Sbjct: 103 ITKYLRRA 110
>AF477978-1|AAL84818.1| 1066|Homo sapiens RSK-like protein protein.
Length = 1066
Score = 39.1 bits (87), Expect = 0.012
Identities = 20/62 (32%), Positives = 37/62 (59%)
Frame = +3
Query: 171 LQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKCLQYLD 350
L+KA +L+ A ++++ +YE A Y GV+ L V+ E+ R +E+++ + +YL
Sbjct: 240 LEKAGELIKLALKKEEEDDYEAASDFYRKGVDLLLEGVQGESSPTR-REAVKRRTAEYLM 298
Query: 351 RA 356
RA
Sbjct: 299 RA 300
>AB070706-1|BAB63956.1| 1066|Homo sapiens RSK-like protein protein.
Length = 1066
Score = 37.5 bits (83), Expect = 0.037
Identities = 19/62 (30%), Positives = 36/62 (58%)
Frame = +3
Query: 171 LQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKCLQYLD 350
L+KA +L+ ++++ +YE A Y GV+ L V+ E+ R +E+++ + +YL
Sbjct: 240 LEKAGELIKLVLKKEEEDDYEAASDFYRKGVDLLLEGVQGESSPTR-REAVKRRTAEYLM 298
Query: 351 RA 356
RA
Sbjct: 299 RA 300
>BC073998-1|AAH73998.1| 287|Homo sapiens ATAD1 protein protein.
Length = 287
Score = 35.5 bits (78), Expect = 0.15
Identities = 16/31 (51%), Positives = 17/31 (54%)
Frame = +3
Query: 522 HVKWSDVAGXXXXXXXXXXXVILPIKFPHLF 614
HV WSD+AG VILPIK HLF
Sbjct: 87 HVTWSDIAGLDDVITDLKDTVILPIKKKHLF 117
>BC063530-1|AAH63530.1| 330|Homo sapiens ATAD1 protein protein.
Length = 330
Score = 35.5 bits (78), Expect = 0.15
Identities = 16/31 (51%), Positives = 17/31 (54%)
Frame = +3
Query: 522 HVKWSDVAGXXXXXXXXXXXVILPIKFPHLF 614
HV WSD+AG VILPIK HLF
Sbjct: 56 HVTWSDIAGLDDVITDLKDTVILPIKKKHLF 86
>AL133327-1|CAI16701.1| 361|Homo sapiens ATPase family, AAA domain
containing 1 protein.
Length = 361
Score = 35.5 bits (78), Expect = 0.15
Identities = 16/31 (51%), Positives = 17/31 (54%)
Frame = +3
Query: 522 HVKWSDVAGXXXXXXXXXXXVILPIKFPHLF 614
HV WSD+AG VILPIK HLF
Sbjct: 87 HVTWSDIAGLDDVITDLKDTVILPIKKKHLF 117
>AK075223-1|BAC11482.1| 361|Homo sapiens protein ( Homo sapiens
cDNA FLJ90742 fis, clone PLACE1011181, weakly similar to
MSP1 PROTEIN HOMOLOG. ).
Length = 361
Score = 35.5 bits (78), Expect = 0.15
Identities = 16/31 (51%), Positives = 17/31 (54%)
Frame = +3
Query: 522 HVKWSDVAGXXXXXXXXXXXVILPIKFPHLF 614
HV WSD+AG VILPIK HLF
Sbjct: 87 HVTWSDIAGLDDVITDLKDTVILPIKKKHLF 117
>BC034999-1|AAH34999.2| 466|Homo sapiens katanin p60 subunit A-like
2 protein.
Length = 466
Score = 35.1 bits (77), Expect = 0.20
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +3
Query: 504 IVVEKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLF 614
I + P++KW+D+ G V+ PI++P LF
Sbjct: 172 IYLHNPNIKWNDIIGLDAAKQLVKEAVVYPIRYPQLF 208
>BX276089-3|CAI16433.1| 280|Homo sapiens katanin p60
(ATPase-containing) subunit A 1 protein.
Length = 280
Score = 31.9 bits (69), Expect = 1.8
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +3
Query: 492 LEGAIVVEKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLF 614
LE I+ + P+V+W D+A V+LP+ P F
Sbjct: 195 LERDIISQNPNVRWDDIADLVEAKKLLKEAVVLPMWMPEFF 235
>BX276089-2|CAI16431.1| 491|Homo sapiens katanin p60
(ATPase-containing) subunit A 1 protein.
Length = 491
Score = 31.9 bits (69), Expect = 1.8
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +3
Query: 492 LEGAIVVEKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLF 614
LE I+ + P+V+W D+A V+LP+ P F
Sbjct: 195 LERDIISQNPNVRWDDIADLVEAKKLLKEAVVLPMWMPEFF 235
>AL078581-3|CAI19506.1| 280|Homo sapiens katanin p60
(ATPase-containing) subunit A 1 protein.
Length = 280
Score = 31.9 bits (69), Expect = 1.8
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +3
Query: 492 LEGAIVVEKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLF 614
LE I+ + P+V+W D+A V+LP+ P F
Sbjct: 195 LERDIISQNPNVRWDDIADLVEAKKLLKEAVVLPMWMPEFF 235
>AL078581-2|CAI19505.1| 491|Homo sapiens katanin p60
(ATPase-containing) subunit A 1 protein.
Length = 491
Score = 31.9 bits (69), Expect = 1.8
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +3
Query: 492 LEGAIVVEKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLF 614
LE I+ + P+V+W D+A V+LP+ P F
Sbjct: 195 LERDIISQNPNVRWDDIADLVEAKKLLKEAVVLPMWMPEFF 235
>AF056022-1|AAC25114.1| 491|Homo sapiens p60 katanin protein.
Length = 491
Score = 31.9 bits (69), Expect = 1.8
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +3
Query: 492 LEGAIVVEKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLF 614
LE I+ + P+V+W D+A V+LP+ P F
Sbjct: 195 LERDIISQNPNVRWDDIADLVEAKKLLKEAVVLPMWMPEFF 235
>BC048217-1|AAH48217.1| 695|Homo sapiens SPATA5 protein protein.
Length = 695
Score = 29.5 bits (63), Expect = 9.9
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +3
Query: 504 IVVEKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLF 614
I ++ P+V WSD+ G V P+K P F
Sbjct: 616 IAIDVPNVSWSDIGGLESIKLKLEQAVEWPLKHPESF 652
>AK091384-1|BAC03651.1| 893|Homo sapiens protein ( Homo sapiens
cDNA FLJ34065 fis, clone FCBBF3000536, highly similar to
Mus musculus spermatogenesis associated factor (SPAF)
mRNA. ).
Length = 893
Score = 29.5 bits (63), Expect = 9.9
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +3
Query: 504 IVVEKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLF 614
I ++ P+V WSD+ G V P+K P F
Sbjct: 617 IAIDVPNVSWSDIGGLESIKLKLEQAVEWPLKHPESF 653
>AF479656-1|AAM43608.1| 790|Homo sapiens spermatogenesis associated
factor protein protein.
Length = 790
Score = 29.5 bits (63), Expect = 9.9
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +3
Query: 504 IVVEKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLF 614
I ++ P+V WSD+ G V P+K P F
Sbjct: 617 IAIDVPNVSWSDIGGLESIKLKLEQAVEWPLKHPESF 653
>AF361489-1|AAM00262.1| 893|Homo sapiens spermatogenesis associated
factor protein.
Length = 893
Score = 29.5 bits (63), Expect = 9.9
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +3
Query: 504 IVVEKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLF 614
I ++ P+V WSD+ G V P+K P F
Sbjct: 617 IAIDVPNVSWSDIGGLESIKLKLEQAVEWPLKHPESF 653
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,448,517
Number of Sequences: 237096
Number of extensions: 1105390
Number of successful extensions: 2573
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 2354
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2516
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6579110070
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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