Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12f22r
         (767 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    23   2.7  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    23   2.7  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    22   4.7  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    22   6.2  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    22   6.2  

>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 20/63 (31%), Positives = 28/63 (44%)
 Frame = +2

Query: 302 KVSTTYNMYNYSYAYLKFSHEQSGSLARSPHAGTQQSRYTLYHSRQMLR**SDKFPNRNY 481
           ++ T YN ++  Y  +   H Q   L RSP              R++L    DKF NRN 
Sbjct: 54  RIRTIYNQFSTPYVGIYIFH-QPVLLIRSPEI-----------LRKVLVKDFDKFTNRNI 101

Query: 482 STN 490
           +TN
Sbjct: 102 ATN 104


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +3

Query: 552 FANSKHESIGRRPAILTTPRPRYA 623
           +AN    S+   P I TTPRP +A
Sbjct: 391 YANMNSYSVPE-PTISTTPRPEWA 413


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +3

Query: 168 ITMSVPTSPLK*TTLHTTYNF 230
           ITM++  SP K  TL   Y F
Sbjct: 149 ITMAIQNSPQKMLTLSEIYQF 169


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = +3

Query: 273 FPTYIRCNNIKCRLLIICITI 335
           FP YIR  ++   ++I+C+ +
Sbjct: 63  FPNYIRTTSMVFCIIIMCLGV 83


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = +3

Query: 273 FPTYIRCNNIKCRLLIICITI 335
           FP YIR  ++   ++I+C+ +
Sbjct: 63  FPNYIRTTSMVFCIIIMCLGV 83


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,970
Number of Sequences: 336
Number of extensions: 2797
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20650031
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)