Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12f20r
         (329 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY029256-1|AAK32965.1|   77|Drosophila melanogaster cytochrome c...    77   4e-15
AE014134-909|AAF52241.3|   77|Drosophila melanogaster CG14028-PA...    77   4e-15
AY070808-1|AAL48430.1|   87|Drosophila melanogaster AT20031p pro...    47   7e-06
AE014134-976|AAN10559.1|   87|Drosophila melanogaster CG31644-PA...    47   7e-06
DQ138878-1|ABA86484.1|  939|Drosophila melanogaster CG17075 prot...    29   1.9  
AE014134-68|AAF51524.1|  968|Drosophila melanogaster CG17075-PA ...    29   1.9  
AY058482-1|AAZ67515.1|  172|Drosophila melanogaster GM13045p pro...    27   4.3  
AE014297-1255|AAF54603.1|  172|Drosophila melanogaster CG4800-PA...    27   4.3  
AL031027-9|CAA19838.1| 1012|Drosophila melanogaster EG:80H7.7 pr...    27   5.7  
AE013599-2102|AAF58112.5|  282|Drosophila melanogaster CG33461-P...    27   7.5  
Y12322-1|CAA72991.1| 1191|Drosophila melanogaster u-shaped protein.    26   10.0 
BT015278-1|AAT94507.1| 1191|Drosophila melanogaster LD12631p pro...    26   10.0 
BT010301-1|AAQ23619.1|  887|Drosophila melanogaster LD09626p pro...    26   10.0 
AE014296-771|AAF47842.3|  887|Drosophila melanogaster CG14998-PA...    26   10.0 
AE014296-770|AAN11588.2|  983|Drosophila melanogaster CG14998-PD...    26   10.0 
AE014296-769|AAN11587.2|  898|Drosophila melanogaster CG14998-PE...    26   10.0 
AE014296-768|AAF47841.3|  851|Drosophila melanogaster CG14998-PB...    26   10.0 
AE014296-767|AAN11586.2|  833|Drosophila melanogaster CG14998-PC...    26   10.0 
AE014134-116|AAF51488.2| 1191|Drosophila melanogaster CG2762-PA ...    26   10.0 

>AY029256-1|AAK32965.1|   77|Drosophila melanogaster cytochrome c
           oxidase subunit VIc protein.
          Length = 77

 Score = 77.4 bits (182), Expect = 4e-15
 Identities = 38/78 (48%), Positives = 49/78 (62%)
 Frame = -3

Query: 264 MAGESAVSTASKPQMRGLLNAVIKRNIIVALALSGVAGFTFKQLIGNERKRKYAEFYRTY 85
           MA   A S+A  P +RGL NA IKRN+ V+L L+ V    +K L+ + +K  YA+FY  Y
Sbjct: 1   MANTPATSSAG-PVLRGLHNATIKRNLAVSLGLTAVVTIAYKILVNDPKKAAYADFYSKY 59

Query: 84  DAEKEFEEMRKKGLFQSC 31
           DA K FE M+  G FQSC
Sbjct: 60  DANKSFERMKAAGRFQSC 77


>AE014134-909|AAF52241.3|   77|Drosophila melanogaster CG14028-PA
           protein.
          Length = 77

 Score = 77.4 bits (182), Expect = 4e-15
 Identities = 38/78 (48%), Positives = 49/78 (62%)
 Frame = -3

Query: 264 MAGESAVSTASKPQMRGLLNAVIKRNIIVALALSGVAGFTFKQLIGNERKRKYAEFYRTY 85
           MA   A S+A  P +RGL NA IKRN+ V+L L+ V    +K L+ + +K  YA+FY  Y
Sbjct: 1   MANTPATSSAG-PVLRGLHNATIKRNLAVSLGLTAVVTIAYKILVNDPKKAAYADFYSKY 59

Query: 84  DAEKEFEEMRKKGLFQSC 31
           DA K FE M+  G FQSC
Sbjct: 60  DANKSFERMKAAGRFQSC 77


>AY070808-1|AAL48430.1|   87|Drosophila melanogaster AT20031p
           protein.
          Length = 87

 Score = 46.8 bits (106), Expect = 7e-06
 Identities = 23/54 (42%), Positives = 28/54 (51%)
 Frame = -3

Query: 192 RNIIVALALSGVAGFTFKQLIGNERKRKYAEFYRTYDAEKEFEEMRKKGLFQSC 31
           RN+ +A  L+ +A   F  L  N RKRKY  FY TYD    F+ M   G   SC
Sbjct: 20  RNVKMACTLALLAPLLFYTLHNNPRKRKYRNFYSTYDPMDAFDRMMSGGYLSSC 73


>AE014134-976|AAN10559.1|   87|Drosophila melanogaster CG31644-PA
           protein.
          Length = 87

 Score = 46.8 bits (106), Expect = 7e-06
 Identities = 23/54 (42%), Positives = 28/54 (51%)
 Frame = -3

Query: 192 RNIIVALALSGVAGFTFKQLIGNERKRKYAEFYRTYDAEKEFEEMRKKGLFQSC 31
           RN+ +A  L+ +A   F  L  N RKRKY  FY TYD    F+ M   G   SC
Sbjct: 20  RNVKMACTLALLAPLLFYTLHNNPRKRKYRNFYSTYDPMDAFDRMMSGGYLSSC 73


>DQ138878-1|ABA86484.1|  939|Drosophila melanogaster CG17075
           protein.
          Length = 939

 Score = 28.7 bits (61), Expect = 1.9
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +2

Query: 119 RSLPMSCLKVKPATPERAKATIMLRLMTALRRPR 220
           + LP+      P  P  ++   MLRL+   RRPR
Sbjct: 663 QELPLKATTATPTPPRSSRLRYMLRLLGRYRRPR 696


>AE014134-68|AAF51524.1|  968|Drosophila melanogaster CG17075-PA
           protein.
          Length = 968

 Score = 28.7 bits (61), Expect = 1.9
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +2

Query: 119 RSLPMSCLKVKPATPERAKATIMLRLMTALRRPR 220
           + LP+      P  P  ++   MLRL+   RRPR
Sbjct: 686 QELPLKATTATPTPPRSSRLRYMLRLLGRYRRPR 719


>AY058482-1|AAZ67515.1|  172|Drosophila melanogaster GM13045p
           protein.
          Length = 172

 Score = 27.5 bits (58), Expect = 4.3
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +1

Query: 139 LEGKTSDARESQSNNNVTFDDGVEETSHLRLARC 240
           LEG  + A E+    ++T + GV+   + RL  C
Sbjct: 44  LEGANASAEEADEGTDITSESGVDVVLNHRLTEC 77


>AE014297-1255|AAF54603.1|  172|Drosophila melanogaster CG4800-PA
           protein.
          Length = 172

 Score = 27.5 bits (58), Expect = 4.3
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +1

Query: 139 LEGKTSDARESQSNNNVTFDDGVEETSHLRLARC 240
           LEG  + A E+    ++T + GV+   + RL  C
Sbjct: 44  LEGANASAEEADEGTDITSESGVDVVLNHRLTEC 77


>AL031027-9|CAA19838.1| 1012|Drosophila melanogaster EG:80H7.7
           protein.
          Length = 1012

 Score = 27.1 bits (57), Expect = 5.7
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = +1

Query: 142 EGKTSDARESQSNNNVTFDDGVEETSHLRL 231
           E K  + R S +N N+ +++GV E  HL++
Sbjct: 294 ELKIMNLRPSANNKNLVWEEGVPEKFHLKI 323


>AE013599-2102|AAF58112.5|  282|Drosophila melanogaster CG33461-PA
           protein.
          Length = 282

 Score = 26.6 bits (56), Expect = 7.5
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -2

Query: 199 HQT*HYCCFGSLGRRWFYLQAAH 131
           H   ++ C GSL  +WF L +AH
Sbjct: 55  HTPTYFLCAGSLINQWFVLTSAH 77


>Y12322-1|CAA72991.1| 1191|Drosophila melanogaster u-shaped protein.
          Length = 1191

 Score = 26.2 bits (55), Expect = 10.0
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +1

Query: 139 LEGKTSDARESQSNNNVTFDDGVEE 213
           LE + +D+R+ Q+NNN   DD  E+
Sbjct: 44  LEDQLNDSRDPQNNNNNIDDDADED 68


>BT015278-1|AAT94507.1| 1191|Drosophila melanogaster LD12631p
           protein.
          Length = 1191

 Score = 26.2 bits (55), Expect = 10.0
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +1

Query: 139 LEGKTSDARESQSNNNVTFDDGVEE 213
           LE + +D+R+ Q+NNN   DD  E+
Sbjct: 44  LEDQLNDSRDPQNNNNNIDDDADED 68


>BT010301-1|AAQ23619.1|  887|Drosophila melanogaster LD09626p
           protein.
          Length = 887

 Score = 26.2 bits (55), Expect = 10.0
 Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = -3

Query: 123 ERKRKYAEFYRTYDAEKEFE-EMRKKGLFQS 34
           E +R+  E  RT D EK  + E RKK +F++
Sbjct: 113 EERRRRIEEIRTRDTEKRHQVEERKKAIFEA 143


>AE014296-771|AAF47842.3|  887|Drosophila melanogaster CG14998-PA,
           isoform A protein.
          Length = 887

 Score = 26.2 bits (55), Expect = 10.0
 Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = -3

Query: 123 ERKRKYAEFYRTYDAEKEFE-EMRKKGLFQS 34
           E +R+  E  RT D EK  + E RKK +F++
Sbjct: 113 EERRRRIEEIRTRDTEKRHQVEERKKAIFEA 143


>AE014296-770|AAN11588.2|  983|Drosophila melanogaster CG14998-PD,
           isoform D protein.
          Length = 983

 Score = 26.2 bits (55), Expect = 10.0
 Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = -3

Query: 123 ERKRKYAEFYRTYDAEKEFE-EMRKKGLFQS 34
           E +R+  E  RT D EK  + E RKK +F++
Sbjct: 77  EERRRRIEEIRTRDTEKRHQVEERKKAIFEA 107


>AE014296-769|AAN11587.2|  898|Drosophila melanogaster CG14998-PE,
           isoform E protein.
          Length = 898

 Score = 26.2 bits (55), Expect = 10.0
 Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = -3

Query: 123 ERKRKYAEFYRTYDAEKEFE-EMRKKGLFQS 34
           E +R+  E  RT D EK  + E RKK +F++
Sbjct: 77  EERRRRIEEIRTRDTEKRHQVEERKKAIFEA 107


>AE014296-768|AAF47841.3|  851|Drosophila melanogaster CG14998-PB,
           isoform B protein.
          Length = 851

 Score = 26.2 bits (55), Expect = 10.0
 Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = -3

Query: 123 ERKRKYAEFYRTYDAEKEFE-EMRKKGLFQS 34
           E +R+  E  RT D EK  + E RKK +F++
Sbjct: 77  EERRRRIEEIRTRDTEKRHQVEERKKAIFEA 107


>AE014296-767|AAN11586.2|  833|Drosophila melanogaster CG14998-PC,
           isoform C protein.
          Length = 833

 Score = 26.2 bits (55), Expect = 10.0
 Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = -3

Query: 123 ERKRKYAEFYRTYDAEKEFE-EMRKKGLFQS 34
           E +R+  E  RT D EK  + E RKK +F++
Sbjct: 59  EERRRRIEEIRTRDTEKRHQVEERKKAIFEA 89


>AE014134-116|AAF51488.2| 1191|Drosophila melanogaster CG2762-PA
           protein.
          Length = 1191

 Score = 26.2 bits (55), Expect = 10.0
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +1

Query: 139 LEGKTSDARESQSNNNVTFDDGVEE 213
           LE + +D+R+ Q+NNN   DD  E+
Sbjct: 44  LEDQLNDSRDPQNNNNNIDDDADED 68


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,358,528
Number of Sequences: 53049
Number of extensions: 220887
Number of successful extensions: 637
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 632
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 637
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 714329562
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)