Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12f19r
(720 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 26 0.41
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 26 0.41
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 26 0.41
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 26 0.41
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 26 0.41
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 26 0.41
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 26 0.41
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 26 0.41
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 25 0.72
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 25 0.72
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 25 0.72
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 25 0.72
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 23 2.2
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 23 2.2
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 22 5.1
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 22 5.1
AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cycl... 21 8.9
AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cycl... 21 8.9
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 25.8 bits (54), Expect = 0.41
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -1
Query: 690 SPDQRVPS*YSQLLFRNWRRSYRIISRPGKGLT 592
+PD+ V + ++LF W +SRPGK +T
Sbjct: 285 TPDRYVMPSWIKMLFLQWLPCLLRMSRPGKKIT 317
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 25.8 bits (54), Expect = 0.41
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -1
Query: 690 SPDQRVPS*YSQLLFRNWRRSYRIISRPGKGLT 592
+PD+ V + ++LF W +SRPGK +T
Sbjct: 285 TPDRYVMPSWIKMLFLQWLPCLLRMSRPGKKIT 317
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 25.8 bits (54), Expect = 0.41
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -1
Query: 690 SPDQRVPS*YSQLLFRNWRRSYRIISRPGKGLT 592
+PD+ V + ++LF W +SRPGK +T
Sbjct: 285 TPDRYVMPSWIKMLFLQWLPCLLRMSRPGKKIT 317
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 25.8 bits (54), Expect = 0.41
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -1
Query: 690 SPDQRVPS*YSQLLFRNWRRSYRIISRPGKGLT 592
+PD+ V + ++LF W +SRPGK +T
Sbjct: 285 TPDRYVMPSWIKMLFLQWLPCLLRMSRPGKKIT 317
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 25.8 bits (54), Expect = 0.41
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -1
Query: 690 SPDQRVPS*YSQLLFRNWRRSYRIISRPGKGLT 592
+PD+ V + ++LF W +SRPGK +T
Sbjct: 285 TPDRYVMPSWIKMLFLQWLPCLLRMSRPGKKIT 317
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 25.8 bits (54), Expect = 0.41
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -1
Query: 690 SPDQRVPS*YSQLLFRNWRRSYRIISRPGKGLT 592
+PD+ V + ++LF W +SRPGK +T
Sbjct: 285 TPDRYVMPSWIKMLFLQWLPCLLRMSRPGKKIT 317
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 25.8 bits (54), Expect = 0.41
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -1
Query: 690 SPDQRVPS*YSQLLFRNWRRSYRIISRPGKGLT 592
+PD+ V + ++LF W +SRPGK +T
Sbjct: 353 TPDRYVMPSWIKMLFLQWLPCLLRMSRPGKKIT 385
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 25.8 bits (54), Expect = 0.41
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -1
Query: 690 SPDQRVPS*YSQLLFRNWRRSYRIISRPGKGLT 592
+PD+ V + ++LF W +SRPGK +T
Sbjct: 353 TPDRYVMPSWIKMLFLQWLPCLLRMSRPGKKIT 385
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 25.0 bits (52), Expect = 0.72
Identities = 20/86 (23%), Positives = 37/86 (43%)
Frame = -3
Query: 715 KRSGQMVYKPGSKSSKLIFSATVPELEKIVSNYLPSGERLNLAGLHYIPSVDKRFPLKMM 536
+RS + SK K+I S + + +NY ++L ++YI + P+ +
Sbjct: 65 ERSRDRKERERSKEPKIISSLSNKTIHNNNNNY----KKLQYYNINYIEQIPVPVPVPVP 120
Query: 535 ALSAKFDPRSFKEAMPFKTFVESLPK 458
F PRS P+ + E +P+
Sbjct: 121 VYYGNFPPRSMG---PWISIQEQIPR 143
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 25.0 bits (52), Expect = 0.72
Identities = 20/86 (23%), Positives = 37/86 (43%)
Frame = -3
Query: 715 KRSGQMVYKPGSKSSKLIFSATVPELEKIVSNYLPSGERLNLAGLHYIPSVDKRFPLKMM 536
+RS + SK K+I S + + +NY ++L ++YI + P+ +
Sbjct: 65 ERSRDRKERERSKEPKIISSLSNKTIHNNNNNY----KKLQYYNINYIEQIPVPVPVPVP 120
Query: 535 ALSAKFDPRSFKEAMPFKTFVESLPK 458
F PRS P+ + E +P+
Sbjct: 121 VYYGNFPPRSMG---PWISIQEQIPR 143
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 25.0 bits (52), Expect = 0.72
Identities = 20/86 (23%), Positives = 37/86 (43%)
Frame = -3
Query: 715 KRSGQMVYKPGSKSSKLIFSATVPELEKIVSNYLPSGERLNLAGLHYIPSVDKRFPLKMM 536
+RS + SK K+I S + + +NY ++L ++YI + P+ +
Sbjct: 65 ERSRDRKERERSKEPKIISSLSNKTIHNNNNNY----KKLQYYNINYIEQIPVPVPVPVP 120
Query: 535 ALSAKFDPRSFKEAMPFKTFVESLPK 458
F PRS P+ + E +P+
Sbjct: 121 VYYGNFPPRSMG---PWISIQEQIPR 143
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 25.0 bits (52), Expect = 0.72
Identities = 20/86 (23%), Positives = 37/86 (43%)
Frame = -3
Query: 715 KRSGQMVYKPGSKSSKLIFSATVPELEKIVSNYLPSGERLNLAGLHYIPSVDKRFPLKMM 536
+RS + SK K+I S + + +NY ++L ++YI + P+ +
Sbjct: 298 ERSRDRKERERSKEPKIISSLSNKTIHNNNNNY----KKLQYYNINYIEQIPVPVPVPVP 353
Query: 535 ALSAKFDPRSFKEAMPFKTFVESLPK 458
F PRS P+ + E +P+
Sbjct: 354 VYYGNFPPRSMG---PWISIQEQIPR 376
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 23.4 bits (48), Expect = 2.2
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = -3
Query: 358 IIGPIWTPAPENVKDSTLDTIILIRNSPDKD 266
I+ W P PEN+K+ + + R+ D +
Sbjct: 14 IVDAAWKPLPENLKEDLIVYQVYPRSFKDSN 44
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 23.4 bits (48), Expect = 2.2
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = -3
Query: 358 IIGPIWTPAPENVKDSTLDTIILIRNSPDKD 266
I+ W P PEN+K+ + + R+ D +
Sbjct: 14 IVDAAWKPLPENLKEDLIVYQVYPRSFKDSN 44
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 22.2 bits (45), Expect = 5.1
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -3
Query: 514 PRSFKEAMPFKTFVESLP 461
PR KE MPF+ F+ P
Sbjct: 607 PRGKKEGMPFQLFLYVSP 624
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 22.2 bits (45), Expect = 5.1
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -3
Query: 514 PRSFKEAMPFKTFVESLP 461
PR KE MPF+ F+ P
Sbjct: 607 PRGKKEGMPFQLFLYVSP 624
>AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 21.4 bits (43), Expect = 8.9
Identities = 9/22 (40%), Positives = 10/22 (45%)
Frame = -2
Query: 314 LDPRHHHLDQKLPGQRRSN*NC 249
LD H HL PG R + C
Sbjct: 101 LDALHDHLGTLYPGMRAPSFRC 122
>AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 21.4 bits (43), Expect = 8.9
Identities = 9/22 (40%), Positives = 10/22 (45%)
Frame = -2
Query: 314 LDPRHHHLDQKLPGQRRSN*NC 249
LD H HL PG R + C
Sbjct: 101 LDALHDHLGTLYPGMRAPSFRC 122
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,035
Number of Sequences: 438
Number of extensions: 4486
Number of successful extensions: 21
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22292145
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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