Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12f19f
         (634 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00004997E1 Cluster: hypothetical protein 291.t00003;...    34   2.5  
UniRef50_Q4T2S5 Cluster: Chromosome undetermined SCAF10198, whol...    34   2.5  
UniRef50_O02036 Cluster: Leucokinins precursor [Contains: Leucok...    34   3.3  
UniRef50_P39976 Cluster: D-lactate dehydrogenase [cytochrome] 3;...    34   3.3  
UniRef50_Q1FNQ3 Cluster: Glycosyl hydrolase, BNR repeat; n=1; Cl...    33   4.3  
UniRef50_Q0CIM2 Cluster: Predicted protein; n=1; Aspergillus ter...    33   4.3  
UniRef50_Q9KMV1 Cluster: GGDEF family protein; n=15; Vibrio chol...    33   5.7  
UniRef50_Q043P1 Cluster: Adhesion exoprotein; n=1; Lactobacillus...    33   5.7  
UniRef50_A4J754 Cluster: Putative uncharacterized protein precur...    32   10.0 

>UniRef50_UPI00004997E1 Cluster: hypothetical protein 291.t00003;
           n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
           protein 291.t00003 - Entamoeba histolytica HM-1:IMSS
          Length = 497

 Score = 34.3 bits (75), Expect = 2.5
 Identities = 21/56 (37%), Positives = 33/56 (58%)
 Frame = -1

Query: 592 TLEDLFHVHMCSKLGLSRFPPQGLKFFLSTWSSNAVSFSSEFPENPTKNGVATSLF 425
           TL +L H+H    L L    PQG+K+ L+T   NAV  S +FP++  ++ +A  +F
Sbjct: 157 TLSELLHLHCSRFLSLGNDFPQGIKYILAT-LRNAV--SEKFPDSAIRS-IAIIIF 208


>UniRef50_Q4T2S5 Cluster: Chromosome undetermined SCAF10198, whole
           genome shotgun sequence; n=1; Tetraodon
           nigroviridis|Rep: Chromosome undetermined SCAF10198,
           whole genome shotgun sequence - Tetraodon nigroviridis
           (Green puffer)
          Length = 775

 Score = 34.3 bits (75), Expect = 2.5
 Identities = 18/45 (40%), Positives = 25/45 (55%)
 Frame = -1

Query: 391 LGSQRLSRTCSLSSAVRRLLCTPPSCTIPYWPSLVSGSICASGTL 257
           LG +RLSR    + A+R +   PP+CT   WP L S    A+ +L
Sbjct: 303 LGRRRLSRHLGSNLALRSVTFCPPTCTCTTWPWLSSSDGGAAESL 347


>UniRef50_O02036 Cluster: Leucokinins precursor [Contains:
           Leucokinin-1; Leucokinin-3; Leucokinin-2]; n=1; Aedes
           aegypti|Rep: Leucokinins precursor [Contains:
           Leucokinin-1; Leucokinin-3; Leucokinin-2] - Aedes
           aegypti (Yellowfever mosquito)
          Length = 228

 Score = 33.9 bits (74), Expect = 3.3
 Identities = 17/43 (39%), Positives = 24/43 (55%)
 Frame = +3

Query: 504 VDKKNFSPWGGKRDKPSFEHMWTWKRSSSVREPSMPKRVRFSP 632
           V K+ F  WGGKR+ P+  + W  KR++  R    PK V  +P
Sbjct: 171 VSKQKFYSWGGKRNNPNVFYPWGGKRNTG-RVHRQPKVVIRNP 212


>UniRef50_P39976 Cluster: D-lactate dehydrogenase [cytochrome] 3;
           n=2; Saccharomyces cerevisiae|Rep: D-lactate
           dehydrogenase [cytochrome] 3 - Saccharomyces cerevisiae
           (Baker's yeast)
          Length = 496

 Score = 33.9 bits (74), Expect = 3.3
 Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = +3

Query: 468 NSDENDTALL-DQVDKKNFSPWGGKRDKPSFEHMWTWKRS 584
           + DE  TA L D  D K  S     +DK  F+ +WTW++S
Sbjct: 319 HDDEKLTAFLKDTTDSKLISEGMMAKDKADFDRLWTWRKS 358


>UniRef50_Q1FNQ3 Cluster: Glycosyl hydrolase, BNR repeat; n=1;
           Clostridium phytofermentans ISDg|Rep: Glycosyl
           hydrolase, BNR repeat - Clostridium phytofermentans ISDg
          Length = 323

 Score = 33.5 bits (73), Expect = 4.3
 Identities = 24/78 (30%), Positives = 37/78 (47%)
 Frame = +3

Query: 285 DTSDGQYGIVHDGGVQRRRRTADDKEQVRDKRWLPNLADIDKTMYIKNNEVATPFLVGFS 464
           D+ +G +GIV+DG +          +Q+   RW      I    Y+ N    T F+VGFS
Sbjct: 45  DSKNG-WGIVNDGELLSTNNAWKTYKQIYKFRWNAQETSIPSITYVDN----TLFVVGFS 99

Query: 465 GNSDENDTALLDQVDKKN 518
             SD  + ++L   D+ N
Sbjct: 100 --SDHKNISILSSKDEGN 115


>UniRef50_Q0CIM2 Cluster: Predicted protein; n=1; Aspergillus
           terreus NIH2624|Rep: Predicted protein - Aspergillus
           terreus (strain NIH 2624)
          Length = 459

 Score = 33.5 bits (73), Expect = 4.3
 Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = -1

Query: 454 TKNG-VATSLFLIYIVLSMSAKLGSQRLSRTCSLSSAVRRLLCTPPSCTIPY 302
           TK G   TS+ L Y V S +  +G+Q L R C     V ++LC P SC   Y
Sbjct: 242 TKEGDTCTSIALEYSVSSAALYMGNQDLIRDCQ-QVVVGKVLCIPLSCEHTY 292


>UniRef50_Q9KMV1 Cluster: GGDEF family protein; n=15; Vibrio
           cholerae|Rep: GGDEF family protein - Vibrio cholerae
          Length = 359

 Score = 33.1 bits (72), Expect = 5.7
 Identities = 18/49 (36%), Positives = 27/49 (55%)
 Frame = +2

Query: 5   TASPAVSGTTTPNRIVYLLISVCTSFCYAVIFFKNHVSSLDINYVLLAG 151
           T SPA +G+   N      +S+   F  +++FF   V +L I+YVLL G
Sbjct: 7   THSPAFTGSELLNTYYQRRVSLFIGFISSLVFFPLAVKNLLIDYVLLGG 55


>UniRef50_Q043P1 Cluster: Adhesion exoprotein; n=1; Lactobacillus
           gasseri ATCC 33323|Rep: Adhesion exoprotein -
           Lactobacillus gasseri (strain ATCC 33323 / DSM 20243)
          Length = 979

 Score = 33.1 bits (72), Expect = 5.7
 Identities = 14/53 (26%), Positives = 26/53 (49%)
 Frame = +3

Query: 243 YANYFNVPDAQMDPDTSDGQYGIVHDGGVQRRRRTADDKEQVRDKRWLPNLAD 401
           + NY  +P+  +D +T D +  +++ G  ++   T  DK    +K   PN  D
Sbjct: 789 HVNYAVIPEETVDANTKDQEIQVIYSGTTKKPEPTKPDKPNKPEKPETPNKPD 841


>UniRef50_A4J754 Cluster: Putative uncharacterized protein
           precursor; n=1; Desulfotomaculum reducens MI-1|Rep:
           Putative uncharacterized protein precursor -
           Desulfotomaculum reducens MI-1
          Length = 140

 Score = 32.3 bits (70), Expect = 10.0
 Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
 Frame = -1

Query: 631 GLKRTRLGMLGSRTLEDLFHVHMCSKLGLSRFPPQGLKFFLSTWSSNAVSFSSEF---PE 461
           GL RTR   +G+R +  + H+ +  K GL+     G +++L  +  N++S   EF   PE
Sbjct: 30  GLARTRGFTIGTRYMRRVDHLPLGPKAGLTLVEVGG-RYYLVAFQENSISLLKEFDTLPE 88

Query: 460 NPTKNGVAT 434
           + + +  AT
Sbjct: 89  SISASSPAT 97


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 670,877,278
Number of Sequences: 1657284
Number of extensions: 14056385
Number of successful extensions: 41840
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 40245
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41830
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46881492319
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)