Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12f19f
         (634 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          25   0.69 
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    24   0.92 
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    24   0.92 
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   2.1  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   4.9  
AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase l...    22   4.9  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          21   6.5  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   6.5  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    21   8.6  
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    21   8.6  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   8.6  

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 24.6 bits (51), Expect = 0.69
 Identities = 10/41 (24%), Positives = 18/41 (43%)
 Frame = +3

Query: 297 GQYGIVHDGGVQRRRRTADDKEQVRDKRWLPNLADIDKTMY 419
           G YG      + +++   ++ E   D +W  N +   KT Y
Sbjct: 201 GAYGPEKSASIPKKKEVKEEIEDEPDHKWKKNDSSKKKTRY 241


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 24.2 bits (50), Expect = 0.92
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +3

Query: 6   QHHQPSAEQQH 38
           QHHQP  +QQH
Sbjct: 177 QHHQPHHQQQH 187


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 24.2 bits (50), Expect = 0.92
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +3

Query: 6   QHHQPSAEQQH 38
           QHHQP  +QQH
Sbjct: 179 QHHQPHHQQQH 189


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 14/49 (28%), Positives = 24/49 (48%)
 Frame = +3

Query: 288 TSDGQYGIVHDGGVQRRRRTADDKEQVRDKRWLPNLADIDKTMYIKNNE 434
           ++D +  ++  G V R+   A   EQ+  +   PNL D  K  Y+  +E
Sbjct: 813 SADDEVPMLLHGVVPRKEIPAKSAEQILAEGGCPNLYDARKP-YVNGSE 860


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -3

Query: 365 LFLIVCCTSSPLHSSIMYN 309
           LF+I+ C    L   +MYN
Sbjct: 6   LFMIIICFERNLSYKVMYN 24


>AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase like
           protein E3 protein.
          Length = 138

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 10/13 (76%), Positives = 10/13 (76%)
 Frame = -1

Query: 616 RLGMLGSRTLEDL 578
           RLGMLG   LEDL
Sbjct: 112 RLGMLGFLCLEDL 124


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = -2

Query: 186 DHRCLCIGDWPCPAKRT*LISSDET 112
           D++C    DW  P KRT  I    T
Sbjct: 217 DNQCSGTIDWALPNKRTVFIRKGGT 241


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/21 (38%), Positives = 9/21 (42%)
 Frame = +3

Query: 507 DKKNFSPWGGKRDKPSFEHMW 569
           + KNF PW  K       H W
Sbjct: 473 ESKNFEPWREKCVVEGNPHCW 493


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/22 (31%), Positives = 10/22 (45%)
 Frame = -1

Query: 514 FLSTWSSNAVSFSSEFPENPTK 449
           F S W  + +    E+P N  K
Sbjct: 132 FFSQWGYDGIDIDWEYPANADK 153


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -2

Query: 360 PYRLLYVVSFALLHHVQYR 304
           PY   Y+ + AL H +Q+R
Sbjct: 40  PYYYQYLQNAALYHKLQFR 58


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +2

Query: 53  YLLISVCTSFCYAVIFFKNHV 115
           +++ ++   FC A IFF  H+
Sbjct: 173 FIIFTMHLLFCCAFIFFNMHL 193


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,618
Number of Sequences: 336
Number of extensions: 3414
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16292796
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)