Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12f19f
         (634 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            27   0.49 
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            26   1.1  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            25   2.0  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            25   2.6  
EF492429-1|ABP35929.1|  155|Anopheles gambiae lysozyme i-2 protein.    23   6.1  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   6.1  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    23   8.1  

>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 27.1 bits (57), Expect = 0.49
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +3

Query: 96   SSLRTMSHHWILITFSWLGTASLQ 167
            SSL  M ++WI + F WL + S++
Sbjct: 3094 SSLHNMFNNWIKLPFEWLFSTSMR 3117



 Score = 24.6 bits (51), Expect = 2.6
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -1

Query: 505  TWSSNAVSFSSEFPENPTKNGVATSLFLI 419
            TW      +SS    N   NGVATS +++
Sbjct: 2830 TWDPTKFDYSSPGTWNALMNGVATSSWIL 2858



 Score = 23.0 bits (47), Expect = 8.1
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +3

Query: 213  LDSSLQYSLPYANYFNVPDAQMDPD 287
            +D   QY  PY    N P + +DPD
Sbjct: 2709 MDPKEQYPSPYVYAGNSPVSLIDPD 2733


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = +3

Query: 213  LDSSLQYSLPYANYFNVPDAQMDPDTSDGQYGIV 314
            LD   QY+ PY    N P + +DP   DGQ+ I+
Sbjct: 2659 LDPKEQYASPYLYAGNSPVSLIDP---DGQFAIL 2689


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = +3

Query: 213  LDSSLQYSLPYANYFNVPDAQMDPDTSDGQYGIV 314
            LD   QY+ PY    N P + +DP   DGQ+  +
Sbjct: 2660 LDPKEQYASPYLYAGNSPVSLIDP---DGQFAFI 2690


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 17/61 (27%), Positives = 27/61 (44%)
 Frame = -1

Query: 463  ENPTKNGVATSLFLIYIVLSMSAKLGSQRLSRTCSLSSAVRRLLCTPPSCTIPYWPSLVS 284
            E P  +G  T  FL+Y   S +   G+  L    + +   R+ + +P      Y P LV+
Sbjct: 976  EEPLPDGTGTGDFLVYYDNSSTLCTGAIPLENVINGNLTSRKTILSPQPIE-GYIPLLVT 1034

Query: 283  G 281
            G
Sbjct: 1035 G 1035


>EF492429-1|ABP35929.1|  155|Anopheles gambiae lysozyme i-2 protein.
          Length = 155

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -1

Query: 373 SRTCSLSSAVRRLLCTPPSCTIPYW 299
           S  CS S+  R+  C P S +  YW
Sbjct: 37  STGCSTSTTCRQSYCGPFSISRAYW 61


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -1

Query: 505  TWSSNAVSFSSEFPENPTKNGVATSLFLI 419
            +W      FSS    N    G+ATS F++
Sbjct: 2820 SWDPRNFDFSSPGTWNALLGGIATSAFIV 2848



 Score = 23.0 bits (47), Expect = 8.1
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +3

Query: 213  LDSSLQYSLPYANYFNVPDAQMDPD 287
            +D   QY  PY    N P + +DPD
Sbjct: 2699 MDPKEQYPSPYVYAGNSPVSLIDPD 2723


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 23.0 bits (47), Expect = 8.1
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -1

Query: 307 PYWPSLVSGSICASGTLK*FA*GREYCR 224
           P+WP L+  S  A   LK      ++CR
Sbjct: 51  PHWPYLLCSSCSAMPALKILQLNVDHCR 78


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 694,149
Number of Sequences: 2352
Number of extensions: 15206
Number of successful extensions: 32
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61886940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)