Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12f19f
         (634 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-2148|AAM70939.1| 2403|Drosophila melanogaster CG18255-P...    31   0.98 
AE013599-2147|AAF58087.2| 7210|Drosophila melanogaster CG18255-P...    31   0.98 
AE013599-2142|AAM70937.1| 4463|Drosophila melanogaster CG18255-P...    31   0.98 
AE013599-2141|AAM70936.1| 9270|Drosophila melanogaster CG18255-P...    31   0.98 
BT003509-1|AAO39513.1|  629|Drosophila melanogaster RE33779p pro...    28   9.1  
AY094745-1|AAM11098.1|  892|Drosophila melanogaster GM03859p pro...    28   9.1  
AY071649-1|AAL49271.1|  892|Drosophila melanogaster RE70955p pro...    28   9.1  
AE014297-1777|AAF55005.1|  892|Drosophila melanogaster CG9925-PA...    28   9.1  
AE014296-1600|AAF50309.2|  629|Drosophila melanogaster CG4476-PB...    28   9.1  

>AE013599-2148|AAM70939.1| 2403|Drosophila melanogaster CG18255-PE,
            isoform E protein.
          Length = 2403

 Score = 31.5 bits (68), Expect = 0.98
 Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
 Frame = +3

Query: 318  DGGVQRRRR-TADDKEQVRDKRWLPNLADIDKTMYIKN 428
            +GG +RRR+   D++EQ   +R +P   D+ K +Y +N
Sbjct: 1476 EGGEKRRRKPKPDEEEQTSSRREVPPPPDLRKRLYFRN 1513


>AE013599-2147|AAF58087.2| 7210|Drosophila melanogaster CG18255-PD,
            isoform D protein.
          Length = 7210

 Score = 31.5 bits (68), Expect = 0.98
 Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
 Frame = +3

Query: 318  DGGVQRRRR-TADDKEQVRDKRWLPNLADIDKTMYIKN 428
            +GG +RRR+   D++EQ   +R +P   D+ K +Y +N
Sbjct: 6283 EGGEKRRRKPKPDEEEQTSSRREVPPPPDLRKRLYFRN 6320


>AE013599-2142|AAM70937.1| 4463|Drosophila melanogaster CG18255-PC,
            isoform C protein.
          Length = 4463

 Score = 31.5 bits (68), Expect = 0.98
 Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
 Frame = +3

Query: 318  DGGVQRRRR-TADDKEQVRDKRWLPNLADIDKTMYIKN 428
            +GG +RRR+   D++EQ   +R +P   D+ K +Y +N
Sbjct: 1476 EGGEKRRRKPKPDEEEQTSSRREVPPPPDLRKRLYFRN 1513


>AE013599-2141|AAM70936.1| 9270|Drosophila melanogaster CG18255-PA,
            isoform A protein.
          Length = 9270

 Score = 31.5 bits (68), Expect = 0.98
 Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
 Frame = +3

Query: 318  DGGVQRRRR-TADDKEQVRDKRWLPNLADIDKTMYIKN 428
            +GG +RRR+   D++EQ   +R +P   D+ K +Y +N
Sbjct: 6283 EGGEKRRRKPKPDEEEQTSSRREVPPPPDLRKRLYFRN 6320


>BT003509-1|AAO39513.1|  629|Drosophila melanogaster RE33779p
           protein.
          Length = 629

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 14/56 (25%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
 Frame = -2

Query: 366 PVPYRLL-YVVSFALLHHVQYRIGHRSYQGPFARQVH*SSSHKVESTADWSPGDPK 202
           P+ YR++ + VS  ++  + Y  G+ +++ P    +    ++ ++  +DW P DPK
Sbjct: 540 PLVYRVVGWCVSGCIIGQLFYWAGYANFKQPKG-SLKSRINNSIKPHSDWGPSDPK 594


>AY094745-1|AAM11098.1|  892|Drosophila melanogaster GM03859p
           protein.
          Length = 892

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = -1

Query: 634 QGLKRTRLGMLGSRTLEDLFHVHMCSKL 551
           Q +K   L MLG++T +  +HVH+  K+
Sbjct: 231 QDIKNLTLRMLGTKTSDGAYHVHLKPKM 258


>AY071649-1|AAL49271.1|  892|Drosophila melanogaster RE70955p
           protein.
          Length = 892

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = -1

Query: 634 QGLKRTRLGMLGSRTLEDLFHVHMCSKL 551
           Q +K   L MLG++T +  +HVH+  K+
Sbjct: 231 QDIKNLTLRMLGTKTSDGAYHVHLKPKM 258


>AE014297-1777|AAF55005.1|  892|Drosophila melanogaster CG9925-PA
           protein.
          Length = 892

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = -1

Query: 634 QGLKRTRLGMLGSRTLEDLFHVHMCSKL 551
           Q +K   L MLG++T +  +HVH+  K+
Sbjct: 231 QDIKNLTLRMLGTKTSDGAYHVHLKPKM 258


>AE014296-1600|AAF50309.2|  629|Drosophila melanogaster CG4476-PB
           protein.
          Length = 629

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 14/56 (25%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
 Frame = -2

Query: 366 PVPYRLL-YVVSFALLHHVQYRIGHRSYQGPFARQVH*SSSHKVESTADWSPGDPK 202
           P+ YR++ + VS  ++  + Y  G+ +++ P    +    ++ ++  +DW P DPK
Sbjct: 540 PLVYRVVGWCVSGCIIGQLFYWAGYANFKQPKG-SLKSRINNSIKPHSDWGPSDPK 594


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,219,221
Number of Sequences: 53049
Number of extensions: 665312
Number of successful extensions: 2111
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1999
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2111
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2641708800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)