Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12f19f
(634 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone este... 24 1.4
AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein. 24 1.4
AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein. 23 1.9
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 22 4.3
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 22 5.7
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 22 5.7
DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 21 7.5
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 21 9.9
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 21 9.9
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 21 9.9
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 21 9.9
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 21 9.9
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 21 9.9
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 21 9.9
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 21 9.9
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 21 9.9
>AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone
esterase protein.
Length = 567
Score = 23.8 bits (49), Expect = 1.4
Identities = 12/47 (25%), Positives = 23/47 (48%)
Frame = +3
Query: 162 LQYINTGGPGADTILDPLDSSLQYSLPYANYFNVPDAQMDPDTSDGQ 302
+ ++N G P +++ P + + SL Y + QMD T+ G+
Sbjct: 497 VSFVNNGVPNVNSVQWPRLNPNEKSLHYLHIAGPGKIQMDSSTNFGR 543
>AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein.
Length = 567
Score = 23.8 bits (49), Expect = 1.4
Identities = 12/47 (25%), Positives = 23/47 (48%)
Frame = +3
Query: 162 LQYINTGGPGADTILDPLDSSLQYSLPYANYFNVPDAQMDPDTSDGQ 302
+ ++N G P +++ P + + SL Y + QMD T+ G+
Sbjct: 497 VSFVNNGVPNVNSVQWPRLNPNEKSLHYLHIAGPGKIQMDSSTNFGR 543
>AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein.
Length = 615
Score = 23.4 bits (48), Expect = 1.9
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -1
Query: 115 DMVLKEDYSITETRTNTNQ*IYN 47
D L ED+ T +TN +Q +YN
Sbjct: 368 DFSLNEDFYPTFNQTNVDQYLYN 390
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 22.2 bits (45), Expect = 4.3
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +1
Query: 493 YSTKSIRRTSVPGAGS 540
Y+T ++ TS PG+GS
Sbjct: 225 YTTATMATTSTPGSGS 240
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 21.8 bits (44), Expect = 5.7
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +2
Query: 128 INYVLLAGHGQSPIHKHRWS 187
+N + GHG P+ +HR S
Sbjct: 267 LNSDVQPGHGSPPVKQHRSS 286
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 21.8 bits (44), Expect = 5.7
Identities = 11/22 (50%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Frame = +2
Query: 8 ASPAVSGTTTP-NRIVYLLISV 70
ASPA SGT++P N +V ++V
Sbjct: 924 ASPAFSGTSSPTNSLVGKTVAV 945
>DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor
protein.
Length = 459
Score = 21.4 bits (43), Expect = 7.5
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -2
Query: 123 SDETWFLKKITA*QKLVQTLISKYTILFGVV 31
SDE +L+K+ + L TLI T+ + V+
Sbjct: 13 SDELRYLEKVRGPKYLPLTLIVPITLTYVVI 43
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 21.0 bits (42), Expect = 9.9
Identities = 11/37 (29%), Positives = 17/37 (45%)
Frame = +3
Query: 336 RRRTADDKEQVRDKRWLPNLADIDKTMYIKNNEVATP 446
RR + ++ K L N+ DID + KN+ P
Sbjct: 326 RRAKGMELQEKSSKSLLANVLDIDDDIRHKNSAANPP 362
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 21.0 bits (42), Expect = 9.9
Identities = 11/37 (29%), Positives = 17/37 (45%)
Frame = +3
Query: 336 RRRTADDKEQVRDKRWLPNLADIDKTMYIKNNEVATP 446
RR + ++ K L N+ DID + KN+ P
Sbjct: 326 RRAKGMELQEKSSKSLLANVLDIDDDIRHKNSAANPP 362
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 21.0 bits (42), Expect = 9.9
Identities = 11/37 (29%), Positives = 17/37 (45%)
Frame = +3
Query: 336 RRRTADDKEQVRDKRWLPNLADIDKTMYIKNNEVATP 446
RR + ++ K L N+ DID + KN+ P
Sbjct: 326 RRAKGMELQEKSSKSLLANVLDIDDDIRHKNSAANPP 362
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 21.0 bits (42), Expect = 9.9
Identities = 11/37 (29%), Positives = 17/37 (45%)
Frame = +3
Query: 336 RRRTADDKEQVRDKRWLPNLADIDKTMYIKNNEVATP 446
RR + ++ K L N+ DID + KN+ P
Sbjct: 326 RRAKGMELQEKSSKSLLANVLDIDDDIRHKNSAANPP 362
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 21.0 bits (42), Expect = 9.9
Identities = 11/37 (29%), Positives = 17/37 (45%)
Frame = +3
Query: 336 RRRTADDKEQVRDKRWLPNLADIDKTMYIKNNEVATP 446
RR + ++ K L N+ DID + KN+ P
Sbjct: 326 RRAKGMELQEKSSKSLLANVLDIDDDIRHKNSAANPP 362
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 21.0 bits (42), Expect = 9.9
Identities = 11/37 (29%), Positives = 17/37 (45%)
Frame = +3
Query: 336 RRRTADDKEQVRDKRWLPNLADIDKTMYIKNNEVATP 446
RR + ++ K L N+ DID + KN+ P
Sbjct: 326 RRAKGMELQEKSSKSLLANVLDIDDDIRHKNSAANPP 362
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 21.0 bits (42), Expect = 9.9
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -3
Query: 143 RERN*YPVMRHGS*RRLQHNRNSYKH 66
RER+ P + R HN N+YK+
Sbjct: 73 RERSREPKIISSLSNRTIHNNNNYKY 98
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.0 bits (42), Expect = 9.9
Identities = 11/37 (29%), Positives = 17/37 (45%)
Frame = +3
Query: 336 RRRTADDKEQVRDKRWLPNLADIDKTMYIKNNEVATP 446
RR + ++ K L N+ DID + KN+ P
Sbjct: 394 RRAKGMELQEKSSKSLLANVLDIDDDIRHKNSAANPP 430
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.0 bits (42), Expect = 9.9
Identities = 11/37 (29%), Positives = 17/37 (45%)
Frame = +3
Query: 336 RRRTADDKEQVRDKRWLPNLADIDKTMYIKNNEVATP 446
RR + ++ K L N+ DID + KN+ P
Sbjct: 394 RRAKGMELQEKSSKSLLANVLDIDDDIRHKNSAANPP 430
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,503
Number of Sequences: 438
Number of extensions: 4061
Number of successful extensions: 19
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18949215
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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