Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12f11r
(753 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI00005A2D3C Cluster: PREDICTED: similar to vacuolar p... 79 1e-13
UniRef50_UPI0000D9F116 Cluster: PREDICTED: similar to vacuolar p... 79 2e-13
UniRef50_Q96QK1 Cluster: Vacuolar protein sorting-associated pro... 79 2e-13
UniRef50_Q4SCA3 Cluster: Chromosome undetermined SCAF14659, whol... 42 0.016
UniRef50_UPI000069F8AC Cluster: interphotoreceptor matrix proteo... 36 0.81
UniRef50_Q4RT35 Cluster: Chromosome 12 SCAF14999, whole genome s... 36 0.81
UniRef50_A0E378 Cluster: Chromosome undetermined scaffold_76, wh... 36 0.81
UniRef50_A7IYF6 Cluster: Gp89; n=1; Corynebacterium phage P1201|... 35 1.9
UniRef50_UPI0000E80A9D Cluster: PREDICTED: similar to blood isla... 34 4.3
UniRef50_Q1LUX5 Cluster: Novel zinc finger domain containing pro... 34 4.3
UniRef50_A0YKH6 Cluster: Putative uncharacterized protein; n=2; ... 33 5.7
UniRef50_UPI0000DD800E Cluster: PREDICTED: hypothetical protein;... 33 7.6
UniRef50_Q93ME5 Cluster: ParB protein; n=2; Clostridium perfring... 33 7.6
UniRef50_Q4DHF6 Cluster: Putative uncharacterized protein; n=2; ... 33 7.6
UniRef50_A7F3X1 Cluster: Putative uncharacterized protein; n=1; ... 33 7.6
UniRef50_UPI0000F219E1 Cluster: PREDICTED: hypothetical protein,... 33 10.0
UniRef50_A4BH45 Cluster: Exodeoxyribonuclease 7 large subunit; n... 33 10.0
UniRef50_O45797 Cluster: Putative uncharacterized protein tag-18... 33 10.0
>UniRef50_UPI00005A2D3C Cluster: PREDICTED: similar to vacuolar
protein sorting 35 isoform 2; n=2; Mammalia|Rep:
PREDICTED: similar to vacuolar protein sorting 35
isoform 2 - Canis familiaris
Length = 361
Score = 79.0 bits (186), Expect = 1e-13
Identities = 36/62 (58%), Positives = 47/62 (75%)
Frame = -3
Query: 670 NQSLTPSLIDAIIQKIREELANLDQSEEVEQITKHFHNTLQHLKNRIESPDPESLGYEGL 491
N ++T +++ +IQKIRE+L NL+ SEE EQI KHFHNTL+HL+ R ESP+ E YEGL
Sbjct: 300 NDAVTIQVLNQLIQKIREDLPNLESSEETEQINKHFHNTLEHLRLRRESPESEGPIYEGL 359
Query: 490 TL 485
L
Sbjct: 360 VL 361
>UniRef50_UPI0000D9F116 Cluster: PREDICTED: similar to vacuolar
protein sorting 35; n=1; Macaca mulatta|Rep: PREDICTED:
similar to vacuolar protein sorting 35 - Macaca mulatta
Length = 723
Score = 78.6 bits (185), Expect = 2e-13
Identities = 36/62 (58%), Positives = 47/62 (75%)
Frame = -3
Query: 670 NQSLTPSLIDAIIQKIREELANLDQSEEVEQITKHFHNTLQHLKNRIESPDPESLGYEGL 491
N ++T +++ +IQKIRE+L NL+ SEE EQI KHFHNTL+HL+ R ESP+ E YEGL
Sbjct: 662 NDAVTIQVLNQLIQKIREDLPNLESSEETEQINKHFHNTLEHLRLRRESPESEGPIYEGL 721
Query: 490 TL 485
L
Sbjct: 722 IL 723
>UniRef50_Q96QK1 Cluster: Vacuolar protein sorting-associated
protein 35; n=52; Eumetazoa|Rep: Vacuolar protein
sorting-associated protein 35 - Homo sapiens (Human)
Length = 796
Score = 78.6 bits (185), Expect = 2e-13
Identities = 36/62 (58%), Positives = 47/62 (75%)
Frame = -3
Query: 670 NQSLTPSLIDAIIQKIREELANLDQSEEVEQITKHFHNTLQHLKNRIESPDPESLGYEGL 491
N ++T +++ +IQKIRE+L NL+ SEE EQI KHFHNTL+HL+ R ESP+ E YEGL
Sbjct: 735 NDAVTIQVLNQLIQKIREDLPNLESSEETEQINKHFHNTLEHLRLRRESPESEGPIYEGL 794
Query: 490 TL 485
L
Sbjct: 795 IL 796
>UniRef50_Q4SCA3 Cluster: Chromosome undetermined SCAF14659, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF14659,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 386
Score = 41.9 bits (94), Expect = 0.016
Identities = 33/92 (35%), Positives = 40/92 (43%), Gaps = 4/92 (4%)
Frame = -1
Query: 738 TAACRRSCWPSCWADTRCCGSAATRVSRPASSTR*YRKYARSWPT*ISPKKWSRSRNTST 559
T C R C PS W T S AT P + T R+ + WP+ +P R +ST
Sbjct: 220 TCRCCRWCTPSRWPSTPRPSSTAT---TPGTWTLTSRQASSPWPSSSAP----RCPTSST 272
Query: 558 TLCSI*RTGSS----LRTPRVWATRVSRCPNP 475
T CS+ SS L TP W S CP P
Sbjct: 273 TSCSLSPMYSSASWPLATPSAWRCLCSHCPWP 304
>UniRef50_UPI000069F8AC Cluster: interphotoreceptor matrix
proteoglycan 1; n=1; Xenopus tropicalis|Rep:
interphotoreceptor matrix proteoglycan 1 - Xenopus
tropicalis
Length = 775
Score = 36.3 bits (80), Expect = 0.81
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Frame = -3
Query: 667 QSLTPSLIDAIIQKIRE-----ELANLDQSEEVEQITKHFHNTLQHLKNRIESPDPESLG 503
++L +L++ II +E E+ NL + V+QI + F TL + + E DP SL
Sbjct: 153 ETLNDTLLNEIISDTKEPLKELEVTNLVPEQPVQQIVE-FTVTLTNQEFTDEQRDPSSLQ 211
Query: 502 YEGLTLS*PWEVRYLFLSIYRNDVVWSVSTREHTIL 395
Y+ LT S ++ +F + +W V R +I+
Sbjct: 212 YQELTKSFQLQMEKVFEKLPGFKEIWVVGFRSDSIV 247
>UniRef50_Q4RT35 Cluster: Chromosome 12 SCAF14999, whole genome
shotgun sequence; n=3; Eumetazoa|Rep: Chromosome 12
SCAF14999, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 1222
Score = 36.3 bits (80), Expect = 0.81
Identities = 21/59 (35%), Positives = 32/59 (54%)
Frame = -2
Query: 665 ESHAQPHRRDNTENTRGAGQLRSVRRSGADHETLPQHFAASEEQDRVSGPRESGLRGSH 489
E AQ R EN + +L SVRRS ADHE+L + +E++ + + R + L+ H
Sbjct: 489 EQRAQKQRA-LLENEQLRMELESVRRSSADHESLQTSYIEAEKRSQATEQRYNKLKEKH 546
>UniRef50_A0E378 Cluster: Chromosome undetermined scaffold_76, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_76,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 187
Score = 36.3 bits (80), Expect = 0.81
Identities = 15/32 (46%), Positives = 25/32 (78%)
Frame = -3
Query: 631 QKIREELANLDQSEEVEQITKHFHNTLQHLKN 536
Q I+ E+A+++ +EVE+ K ++NTLQHLK+
Sbjct: 101 QGIQAEVASIEDLKEVEKQVKQYNNTLQHLKS 132
>UniRef50_A7IYF6 Cluster: Gp89; n=1; Corynebacterium phage
P1201|Rep: Gp89 - Corynebacterium phage P1201
Length = 86
Score = 35.1 bits (77), Expect = 1.9
Identities = 24/78 (30%), Positives = 39/78 (50%)
Frame = +3
Query: 207 MCEIL*LVFIQQCFHNPYIIYLFFISLYKCYIYFIISLIHLDDVY*ILVVEGYSREPLTL 386
M I L+FI F Y++++F+I IY+++ +I+L +Y +L + Y + L
Sbjct: 9 MLYIYVLLFICNLFIFYYLLFIFYIYYLLFIIYYLLYIIYLYYIY-LLFIFIYYLYIIFL 67
Query: 387 YIASIVCSRVLTLQTTSL 440
I CSR QT L
Sbjct: 68 LITCATCSRRAMYQTIYL 85
>UniRef50_UPI0000E80A9D Cluster: PREDICTED: similar to blood island
enriched kruppel like factor; n=1; Gallus gallus|Rep:
PREDICTED: similar to blood island enriched kruppel like
factor - Gallus gallus
Length = 399
Score = 33.9 bits (74), Expect = 4.3
Identities = 30/106 (28%), Positives = 41/106 (38%), Gaps = 4/106 (3%)
Frame = -1
Query: 753 AQQCXTAACRRSCWPSC-WADTRCCGSAATRVSRPASSTR*YRKYARSWPT*I---SPKK 586
A T C R C C W G A+ R SR ++ A +W + SP
Sbjct: 132 AAPTTTRPCTRPCPARCPWTRRSLSGLASRRSSRRSAPACWGYLAASTWDREVVNTSPPA 191
Query: 585 WSRSRNTSTTLCSI*RTGSSLRTPRVWATRVSRCPNPGRSGTCSCQ 448
W R+R C R + + WA SRCP P R+ +C+
Sbjct: 192 WRRAR------CRGHRCRTLVSPTAAWAPPRSRCPVPTRTCWPTCR 231
>UniRef50_Q1LUX5 Cluster: Novel zinc finger domain containing
protein; n=5; Danio rerio|Rep: Novel zinc finger domain
containing protein - Danio rerio (Zebrafish)
(Brachydanio rerio)
Length = 636
Score = 33.9 bits (74), Expect = 4.3
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = -2
Query: 614 AGQLRSVRRSGADHETLPQHFAASEEQDRVSGPRESGLRGSH 489
A +RS RRS A ET A+++E ++SGP ++ + G H
Sbjct: 304 ARHMRSHRRSAAGQETSDPSPASADEDRKLSGPGDNDISGGH 345
>UniRef50_A0YKH6 Cluster: Putative uncharacterized protein; n=2;
Oscillatoriales|Rep: Putative uncharacterized protein -
Lyngbya sp. PCC 8106
Length = 512
Score = 33.5 bits (73), Expect = 5.7
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +3
Query: 225 LVFIQQCFHNPYIIYLFFISLYKCYIYFIISLIHL 329
LV+ F +PY YL++I L+ Y+Y +I + +
Sbjct: 72 LVWFTSAFLHPYFFYLYYIILFGVYVYSLIGIAEI 106
>UniRef50_UPI0000DD800E Cluster: PREDICTED: hypothetical protein;
n=2; Catarrhini|Rep: PREDICTED: hypothetical protein -
Homo sapiens
Length = 309
Score = 33.1 bits (72), Expect = 7.6
Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 8/100 (8%)
Frame = -1
Query: 720 SC-WPSCWADTRC-C---GSAATRVSRPASSTR*YRKYARSWPT*ISPKKWSRSRNTSTT 556
SC W S + C C G+++T S +S T +S T + W SR +ST
Sbjct: 68 SCNWQSSRISSTCSCQSSGTSSTSCSCQSSETS-STCSCQSSGTSSTSCSWQFSRTSSTC 126
Query: 555 LCSI*RTGS---SLRTPRVWATRVSRCPNPGRSGTCSCQS 445
C RT S S ++ R +T S C + S TCSCQ+
Sbjct: 127 RCQSSRTSSTSCSCQSSRTSSTSCS-CQSSRTSSTCSCQT 165
>UniRef50_Q93ME5 Cluster: ParB protein; n=2; Clostridium
perfringens|Rep: ParB protein - Clostridium perfringens
Length = 426
Score = 33.1 bits (72), Expect = 7.6
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = -2
Query: 305 INITFI*RNEKQIYYIWVVETLLDENQLKYLTHNSIV 195
INI I RNEK Y I +E+L ++ +L L HN +V
Sbjct: 36 INIDRIKRNEKNFYEIVDIESLAEDIKLNGLNHNLVV 72
>UniRef50_Q4DHF6 Cluster: Putative uncharacterized protein; n=2;
Trypanosoma cruzi|Rep: Putative uncharacterized protein
- Trypanosoma cruzi
Length = 507
Score = 33.1 bits (72), Expect = 7.6
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = -3
Query: 604 LDQSEEVEQITKHFHNTLQHLKNRIESPDPESL 506
L+ SEE +Q+ +FH + L +RIESP E +
Sbjct: 338 LEASEETQQVKMYFHTGQEELCDRIESPKNEDI 370
>UniRef50_A7F3X1 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 255
Score = 33.1 bits (72), Expect = 7.6
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = -3
Query: 553 LQHLKNRIESPDPESLGYEGLTLS*PWEVRYLFLSIYRNDVVWSVSTREHTIL 395
L+ + N ES D +SL + L S WE+ + S + +W+ +TR+ +L
Sbjct: 49 LRTMDNESESADDDSLVFPSLNFSLDWELWSMKYSFDSRNYLWNPATRKSVVL 101
>UniRef50_UPI0000F219E1 Cluster: PREDICTED: hypothetical protein,
partial; n=1; Danio rerio|Rep: PREDICTED: hypothetical
protein, partial - Danio rerio
Length = 249
Score = 32.7 bits (71), Expect = 10.0
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = -2
Query: 650 PHRRDNTENTRG-AGQLRSVRRSGADHETLPQHFAASEEQDRVSGPRESGLRGSHA 486
P +R + EN GQ+ +R A H T P A++E VS SGL G H+
Sbjct: 46 PTKRKHHENKDSDKGQMNKMRCLFASHLTNPNESTANQESWNVSSHGHSGLSGLHS 101
>UniRef50_A4BH45 Cluster: Exodeoxyribonuclease 7 large subunit; n=2;
Gammaproteobacteria|Rep: Exodeoxyribonuclease 7 large
subunit - Reinekea sp. MED297
Length = 451
Score = 32.7 bits (71), Expect = 10.0
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -3
Query: 622 REELANLDQSEEVEQITKHFHNTLQHLKNRIESPD 518
R ++A ++Q K H TL HLK R+ SPD
Sbjct: 273 RFDVAEKQLLRSIQQTLKRSHTTLTHLKQRLRSPD 307
>UniRef50_O45797 Cluster: Putative uncharacterized protein tag-181;
n=3; Caenorhabditis|Rep: Putative uncharacterized
protein tag-181 - Caenorhabditis elegans
Length = 908
Score = 32.7 bits (71), Expect = 10.0
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +3
Query: 252 NPYIIYLFFISLYKCYIYFIISLIHLDDVY*ILVVEGYSREPLT-LYIASIVCS 410
+P+I+ LFF +YFI+ + D+ +L+ +G E L YIA + C+
Sbjct: 559 SPWIVRLFFSFQDDACLYFIMEYVPGGDMMTLLIQKGIFEEDLARFYIAELACA 612
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 667,041,406
Number of Sequences: 1657284
Number of extensions: 13044490
Number of successful extensions: 39624
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 37662
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39561
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62146450145
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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