Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12f11r
         (753 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ370040-1|ABD18601.1|  121|Anopheles gambiae putative TIL domai...    25   3.3  
AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic acetylch...    24   5.8  
AF020851-1|AAC31864.1|  214|Anopheles gambiae unknown protein.         24   5.8  
AF020850-1|AAC31863.1|  214|Anopheles gambiae unknown protein.         24   5.8  
AF020849-1|AAC31862.1|  214|Anopheles gambiae unknown protein.         24   5.8  
AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic acetylch...    23   7.7  

>DQ370040-1|ABD18601.1|  121|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 121

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -1

Query: 750 QQCXTAACRRSCWPSCW 700
           Q+   +ACRRSC P C+
Sbjct: 82  QRKNDSACRRSCNPGCF 98


>AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 5/67 (7%)
 Frame = +3

Query: 240 QCFHNPYIIYLFFISLYKCYIYFIISLIHLDDVY*ILVVEGY-----SREPLTLYIASIV 404
           QC   PY+   F I + +  +Y+  +LI    +   + + G+     S E LTL +  +V
Sbjct: 212 QCCPEPYVDITFTIQIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLGLTILV 271

Query: 405 CSRVLTL 425
              V +L
Sbjct: 272 SQTVFSL 278


>AF020851-1|AAC31864.1|  214|Anopheles gambiae unknown protein.
          Length = 214

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -3

Query: 574 TKHFHNTLQHLKNRIESPDPESLGYE 497
           TKH H++  H + R E    +  GYE
Sbjct: 25  TKHRHHSRHHHRRRRERYRSQRFGYE 50


>AF020850-1|AAC31863.1|  214|Anopheles gambiae unknown protein.
          Length = 214

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -3

Query: 574 TKHFHNTLQHLKNRIESPDPESLGYE 497
           TKH H++  H + R E    +  GYE
Sbjct: 25  TKHRHHSRHHHRRRRERYRSQRFGYE 50


>AF020849-1|AAC31862.1|  214|Anopheles gambiae unknown protein.
          Length = 214

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -3

Query: 574 TKHFHNTLQHLKNRIESPDPESLGYE 497
           TKH H++  H + R E    +  GYE
Sbjct: 25  TKHRHHSRHHHRRRRERYRSQRFGYE 50


>AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +3

Query: 240 QCFHNPYIIYLFFISLYKCYIYFIISLI 323
           QC   PY+   F I + +  +Y+  +LI
Sbjct: 212 QCCPEPYVDITFTIQIRRRTLYYFFNLI 239


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 706,403
Number of Sequences: 2352
Number of extensions: 14570
Number of successful extensions: 89
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 89
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 89
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77755161
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)