Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12f11r
         (753 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC093036-1|AAH93036.1|  796|Homo sapiens vacuolar protein sortin...    79   2e-14
BC010362-1|AAH10362.1|  796|Homo sapiens vacuolar protein sortin...    79   2e-14
BC002414-1|AAH02414.1|  796|Homo sapiens vacuolar protein sortin...    79   2e-14
AY007112-1|AAG01989.1|  190|Homo sapiens protein ( Homo sapiens ...    79   2e-14
AL512769-1|CAC21686.1|  497|Homo sapiens hypothetical protein pr...    79   2e-14
AK223218-1|BAD96938.1|  796|Homo sapiens vacuolar protein sortin...    79   2e-14
AK023650-1|BAB14626.1|  661|Homo sapiens protein ( Homo sapiens ...    79   2e-14
AK001614-1|BAA91790.1|  796|Homo sapiens protein ( Homo sapiens ...    79   2e-14
AF191298-1|AAF02778.2|  796|Homo sapiens vacuolar sorting protei...    79   2e-14
AF186382-1|AAG40619.1|  796|Homo sapiens vacuolar protein sortin...    79   2e-14
AF183418-1|AAG09687.1|  796|Homo sapiens maternal-embryonic 3 pr...    79   2e-14
AF175265-1|AAF89953.1|  796|Homo sapiens vacuolar sorting protei...    79   2e-14
AK000395-1|BAA91137.1|  190|Homo sapiens protein ( Homo sapiens ...    77   5e-14
BC015348-1|AAH15348.1|   84|Homo sapiens Unknown (protein for IM...    35   0.36 
BC036652-1|AAH36652.2|  525|Homo sapiens ANKRD57 protein protein.      32   1.9  
AK025523-1|BAB15161.1|  320|Homo sapiens protein ( Homo sapiens ...    32   1.9  
AC140485-2|AAY24143.1|  525|Homo sapiens unknown protein.              32   1.9  
AC011753-1|AAY24292.1|  525|Homo sapiens unknown protein.              32   1.9  
AJ406945-1|CAC27584.1|  193|Homo sapiens keratin associated prot...    31   3.4  
AK128140-1|BAC87294.1|  280|Homo sapiens protein ( Homo sapiens ...    30   7.8  
AK125824-1|BAC86307.1|  280|Homo sapiens protein ( Homo sapiens ...    30   7.8  
AK122582-1|BAC56923.1| 1383|Homo sapiens FLJ00269 protein protein.     30   7.8  

>BC093036-1|AAH93036.1|  796|Homo sapiens vacuolar protein sorting
           35 homolog (S. cerevisiae) protein.
          Length = 796

 Score = 78.6 bits (185), Expect = 2e-14
 Identities = 36/62 (58%), Positives = 47/62 (75%)
 Frame = -3

Query: 670 NQSLTPSLIDAIIQKIREELANLDQSEEVEQITKHFHNTLQHLKNRIESPDPESLGYEGL 491
           N ++T  +++ +IQKIRE+L NL+ SEE EQI KHFHNTL+HL+ R ESP+ E   YEGL
Sbjct: 735 NDAVTIQVLNQLIQKIREDLPNLESSEETEQINKHFHNTLEHLRLRRESPESEGPIYEGL 794

Query: 490 TL 485
            L
Sbjct: 795 IL 796


>BC010362-1|AAH10362.1|  796|Homo sapiens vacuolar protein sorting
           35 homolog (S. cerevisiae) protein.
          Length = 796

 Score = 78.6 bits (185), Expect = 2e-14
 Identities = 36/62 (58%), Positives = 47/62 (75%)
 Frame = -3

Query: 670 NQSLTPSLIDAIIQKIREELANLDQSEEVEQITKHFHNTLQHLKNRIESPDPESLGYEGL 491
           N ++T  +++ +IQKIRE+L NL+ SEE EQI KHFHNTL+HL+ R ESP+ E   YEGL
Sbjct: 735 NDAVTIQVLNQLIQKIREDLPNLESSEETEQINKHFHNTLEHLRLRRESPESEGPIYEGL 794

Query: 490 TL 485
            L
Sbjct: 795 IL 796


>BC002414-1|AAH02414.1|  796|Homo sapiens vacuolar protein sorting
           35 homolog (S. cerevisiae) protein.
          Length = 796

 Score = 78.6 bits (185), Expect = 2e-14
 Identities = 36/62 (58%), Positives = 47/62 (75%)
 Frame = -3

Query: 670 NQSLTPSLIDAIIQKIREELANLDQSEEVEQITKHFHNTLQHLKNRIESPDPESLGYEGL 491
           N ++T  +++ +IQKIRE+L NL+ SEE EQI KHFHNTL+HL+ R ESP+ E   YEGL
Sbjct: 735 NDAVTIQVLNQLIQKIREDLPNLESSEETEQINKHFHNTLEHLRLRRESPESEGPIYEGL 794

Query: 490 TL 485
            L
Sbjct: 795 IL 796


>AY007112-1|AAG01989.1|  190|Homo sapiens protein ( Homo sapiens
           clone TCCCTA00141 mRNA sequence. ).
          Length = 190

 Score = 78.6 bits (185), Expect = 2e-14
 Identities = 36/62 (58%), Positives = 47/62 (75%)
 Frame = -3

Query: 670 NQSLTPSLIDAIIQKIREELANLDQSEEVEQITKHFHNTLQHLKNRIESPDPESLGYEGL 491
           N ++T  +++ +IQKIRE+L NL+ SEE EQI KHFHNTL+HL+ R ESP+ E   YEGL
Sbjct: 129 NDAVTIQVLNQLIQKIREDLPNLESSEETEQINKHFHNTLEHLRLRRESPESEGPIYEGL 188

Query: 490 TL 485
            L
Sbjct: 189 IL 190


>AL512769-1|CAC21686.1|  497|Homo sapiens hypothetical protein
           protein.
          Length = 497

 Score = 78.6 bits (185), Expect = 2e-14
 Identities = 36/62 (58%), Positives = 47/62 (75%)
 Frame = -3

Query: 670 NQSLTPSLIDAIIQKIREELANLDQSEEVEQITKHFHNTLQHLKNRIESPDPESLGYEGL 491
           N ++T  +++ +IQKIRE+L NL+ SEE EQI KHFHNTL+HL+ R ESP+ E   YEGL
Sbjct: 436 NDAVTIQVLNQLIQKIREDLPNLESSEETEQINKHFHNTLEHLRLRRESPESEGPIYEGL 495

Query: 490 TL 485
            L
Sbjct: 496 IL 497


>AK223218-1|BAD96938.1|  796|Homo sapiens vacuolar protein sorting
           35 variant protein.
          Length = 796

 Score = 78.6 bits (185), Expect = 2e-14
 Identities = 36/62 (58%), Positives = 47/62 (75%)
 Frame = -3

Query: 670 NQSLTPSLIDAIIQKIREELANLDQSEEVEQITKHFHNTLQHLKNRIESPDPESLGYEGL 491
           N ++T  +++ +IQKIRE+L NL+ SEE EQI KHFHNTL+HL+ R ESP+ E   YEGL
Sbjct: 735 NDAVTIQVLNQLIQKIREDLPNLESSEETEQINKHFHNTLEHLRLRRESPESEGPIYEGL 794

Query: 490 TL 485
            L
Sbjct: 795 IL 796


>AK023650-1|BAB14626.1|  661|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13588 fis, clone PLACE1009298, weakly similar to
           VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS35. ).
          Length = 661

 Score = 78.6 bits (185), Expect = 2e-14
 Identities = 36/62 (58%), Positives = 47/62 (75%)
 Frame = -3

Query: 670 NQSLTPSLIDAIIQKIREELANLDQSEEVEQITKHFHNTLQHLKNRIESPDPESLGYEGL 491
           N ++T  +++ +IQKIRE+L NL+ SEE EQI KHFHNTL+HL+ R ESP+ E   YEGL
Sbjct: 600 NDAVTIQVLNQLIQKIREDLPNLESSEETEQINKHFHNTLEHLRLRRESPESEGPIYEGL 659

Query: 490 TL 485
            L
Sbjct: 660 IL 661


>AK001614-1|BAA91790.1|  796|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10752 fis, clone NT2RP3004480, weakly similar to
           VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS35. ).
          Length = 796

 Score = 78.6 bits (185), Expect = 2e-14
 Identities = 36/62 (58%), Positives = 47/62 (75%)
 Frame = -3

Query: 670 NQSLTPSLIDAIIQKIREELANLDQSEEVEQITKHFHNTLQHLKNRIESPDPESLGYEGL 491
           N ++T  +++ +IQKIRE+L NL+ SEE EQI KHFHNTL+HL+ R ESP+ E   YEGL
Sbjct: 735 NDAVTIQVLNQLIQKIREDLPNLESSEETEQINKHFHNTLEHLRLRRESPESEGPIYEGL 794

Query: 490 TL 485
            L
Sbjct: 795 IL 796


>AF191298-1|AAF02778.2|  796|Homo sapiens vacuolar sorting protein
           35 protein.
          Length = 796

 Score = 78.6 bits (185), Expect = 2e-14
 Identities = 36/62 (58%), Positives = 47/62 (75%)
 Frame = -3

Query: 670 NQSLTPSLIDAIIQKIREELANLDQSEEVEQITKHFHNTLQHLKNRIESPDPESLGYEGL 491
           N ++T  +++ +IQKIRE+L NL+ SEE EQI KHFHNTL+HL+ R ESP+ E   YEGL
Sbjct: 735 NDAVTIQVLNQLIQKIREDLPNLESSEETEQINKHFHNTLEHLRLRRESPESEGPIYEGL 794

Query: 490 TL 485
            L
Sbjct: 795 IL 796


>AF186382-1|AAG40619.1|  796|Homo sapiens vacuolar protein sorting
           35 protein.
          Length = 796

 Score = 78.6 bits (185), Expect = 2e-14
 Identities = 36/62 (58%), Positives = 47/62 (75%)
 Frame = -3

Query: 670 NQSLTPSLIDAIIQKIREELANLDQSEEVEQITKHFHNTLQHLKNRIESPDPESLGYEGL 491
           N ++T  +++ +IQKIRE+L NL+ SEE EQI KHFHNTL+HL+ R ESP+ E   YEGL
Sbjct: 735 NDAVTIQVLNQLIQKIREDLPNLESSEETEQINKHFHNTLEHLRLRRESPESEGPIYEGL 794

Query: 490 TL 485
            L
Sbjct: 795 IL 796


>AF183418-1|AAG09687.1|  796|Homo sapiens maternal-embryonic 3
           protein.
          Length = 796

 Score = 78.6 bits (185), Expect = 2e-14
 Identities = 36/62 (58%), Positives = 47/62 (75%)
 Frame = -3

Query: 670 NQSLTPSLIDAIIQKIREELANLDQSEEVEQITKHFHNTLQHLKNRIESPDPESLGYEGL 491
           N ++T  +++ +IQKIRE+L NL+ SEE EQI KHFHNTL+HL+ R ESP+ E   YEGL
Sbjct: 735 NDAVTIQVLNQLIQKIREDLPNLESSEETEQINKHFHNTLEHLRLRRESPESEGPIYEGL 794

Query: 490 TL 485
            L
Sbjct: 795 IL 796


>AF175265-1|AAF89953.1|  796|Homo sapiens vacuolar sorting protein
           35 protein.
          Length = 796

 Score = 78.6 bits (185), Expect = 2e-14
 Identities = 36/62 (58%), Positives = 47/62 (75%)
 Frame = -3

Query: 670 NQSLTPSLIDAIIQKIREELANLDQSEEVEQITKHFHNTLQHLKNRIESPDPESLGYEGL 491
           N ++T  +++ +IQKIRE+L NL+ SEE EQI KHFHNTL+HL+ R ESP+ E   YEGL
Sbjct: 735 NDAVTIQVLNQLIQKIREDLPNLESSEETEQINKHFHNTLEHLRLRRESPESEGPIYEGL 794

Query: 490 TL 485
            L
Sbjct: 795 IL 796


>AK000395-1|BAA91137.1|  190|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20388 fis, clone KAIA4517. ).
          Length = 190

 Score = 77.4 bits (182), Expect = 5e-14
 Identities = 35/60 (58%), Positives = 46/60 (76%)
 Frame = -3

Query: 670 NQSLTPSLIDAIIQKIREELANLDQSEEVEQITKHFHNTLQHLKNRIESPDPESLGYEGL 491
           N ++T  +++ +IQKIRE+L NL+ SEE EQI KHFHNTL+HL+ R ESP+ E   YEGL
Sbjct: 129 NDAVTIQVLNQLIQKIREDLPNLESSEETEQINKHFHNTLEHLRLRRESPESEGPIYEGL 188


>BC015348-1|AAH15348.1|   84|Homo sapiens Unknown (protein for
           IMAGE:4415302) protein.
          Length = 84

 Score = 34.7 bits (76), Expect = 0.36
 Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
 Frame = -3

Query: 748 AVXDGGVQAQXXXXXXXXXXXXXXXGNQSLTPSLI-DAIIQKIREELANLDQS-EEVEQI 575
           +V DG  +A+                 Q   PS++ D I   ++EELAN + S EE+ Q+
Sbjct: 10  SVGDGVPEAEKNAGEPENTYILRPVFQQRFRPSVVKDCIHAVLKEELANAEYSPEEMPQL 69

Query: 574 TKHFHNTLQHLKNR 533
           TKH    ++  K +
Sbjct: 70  TKHLSENIKDKKKK 83


>BC036652-1|AAH36652.2|  525|Homo sapiens ANKRD57 protein protein.
          Length = 525

 Score = 32.3 bits (70), Expect = 1.9
 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = +1

Query: 421 HSKLRHYDRLTRTSTGPPRVRTA*DPRSPDS-RGPETRSCSSDAA 552
           H K R  +  +  S  PPR++   +P +PD   GPE R    DAA
Sbjct: 78  HLKKRFCEGPSEPSGDPPRIQVTAEPEAPDGPAGPEARDRLPDAA 122


>AK025523-1|BAB15161.1|  320|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ21870 fis, clone HEP02445. ).
          Length = 320

 Score = 32.3 bits (70), Expect = 1.9
 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = +1

Query: 421 HSKLRHYDRLTRTSTGPPRVRTA*DPRSPDS-RGPETRSCSSDAA 552
           H K R  +  +  S  PPR++   +P +PD   GPE R    DAA
Sbjct: 78  HLKKRFCEGPSEPSGDPPRIQVTAEPEAPDGPAGPEARDRLPDAA 122


>AC140485-2|AAY24143.1|  525|Homo sapiens unknown protein.
          Length = 525

 Score = 32.3 bits (70), Expect = 1.9
 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = +1

Query: 421 HSKLRHYDRLTRTSTGPPRVRTA*DPRSPDS-RGPETRSCSSDAA 552
           H K R  +  +  S  PPR++   +P +PD   GPE R    DAA
Sbjct: 78  HLKKRFCEGPSEPSGDPPRIQVTAEPEAPDGPAGPEARDRLPDAA 122


>AC011753-1|AAY24292.1|  525|Homo sapiens unknown protein.
          Length = 525

 Score = 32.3 bits (70), Expect = 1.9
 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = +1

Query: 421 HSKLRHYDRLTRTSTGPPRVRTA*DPRSPDS-RGPETRSCSSDAA 552
           H K R  +  +  S  PPR++   +P +PD   GPE R    DAA
Sbjct: 78  HLKKRFCEGPSEPSGDPPRIQVTAEPEAPDGPAGPEARDRLPDAA 122


>AJ406945-1|CAC27584.1|  193|Homo sapiens keratin associated protein
           4.15 protein.
          Length = 193

 Score = 31.5 bits (68), Expect = 3.4
 Identities = 15/34 (44%), Positives = 16/34 (47%)
 Frame = -1

Query: 744 CXTAACRRSCWPSCWADTRCCGSAATRVSRPASS 643
           C    CR SC PSC   T CC +   R S   SS
Sbjct: 44  CQPTCCRPSCCPSC-CQTTCCRTTCCRPSCCVSS 76


>AK128140-1|BAC87294.1|  280|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46261 fis, clone TESTI4025062. ).
          Length = 280

 Score = 30.3 bits (65), Expect = 7.8
 Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 9/94 (9%)
 Frame = -1

Query: 699 ADTRC-CGSAATRVSRPASSTR*YRKYARSW---PT*ISPKKWSRSRNTSTTLCSI*RTG 532
           + T C C S+ T  +  +  +      +RSW    T  +   W  S  TS+T CS   +G
Sbjct: 12  SSTSCSCQSSGTSFTSCSCRSSGTSSTSRSWWSSGTSSTSCSWWSS-GTSSTFCSCWSSG 70

Query: 531 SSLRTPRVWATRVS----RCPNPGRSGT-CSCQS 445
           +S  +   W++  S     C + G S T CSC S
Sbjct: 71  TSFTSCSCWSSGTSSTPCSCRSSGTSSTSCSCWS 104


>AK125824-1|BAC86307.1|  280|Homo sapiens protein ( Homo sapiens
           cDNA FLJ43836 fis, clone TESTI4005857. ).
          Length = 280

 Score = 30.3 bits (65), Expect = 7.8
 Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 9/94 (9%)
 Frame = -1

Query: 699 ADTRC-CGSAATRVSRPASSTR*YRKYARSW---PT*ISPKKWSRSRNTSTTLCSI*RTG 532
           + T C C S+ T  +  +  +      +RSW    T  +   W  S  TS+T CS   +G
Sbjct: 12  SSTSCSCQSSGTSFTSCSCRSSGTSSTSRSWWSSGTSSTSCSWWSS-GTSSTFCSCWSSG 70

Query: 531 SSLRTPRVWATRVS----RCPNPGRSGT-CSCQS 445
           +S  +   W++  S     C + G S T CSC S
Sbjct: 71  TSFTSCSCWSSGTSSTPCSCRSSGTSSTSCSCWS 104


>AK122582-1|BAC56923.1| 1383|Homo sapiens FLJ00269 protein protein.
          Length = 1383

 Score = 30.3 bits (65), Expect = 7.8
 Identities = 14/48 (29%), Positives = 21/48 (43%)
 Frame = -1

Query: 723 RSCWPSCWADTRCCGSAATRVSRPASSTR*YRKYARSWPT*ISPKKWS 580
           R C P+CW   +C G A      P+       +   + P+ + PKK S
Sbjct: 259 RDCSPTCWEQGKCSGPAEQEKRGPSFPKECCSQGPTAHPSCLGPKKLS 306


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,455,800
Number of Sequences: 237096
Number of extensions: 1968888
Number of successful extensions: 4768
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 4305
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4740
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9071127468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)